RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 PSMD13Q9UNM6 376 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 EFR3BQ9Y2G0 817 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 TMX2Q9Y320 296 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 TSC22D4Q9Y3Q8 395 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 HTR3EA5X5Y0 456 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 NOP56O00567 594 aaKnown RBP15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 CASQ2O14958 399 aaPredicted RBP15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 TMED10P49755 219 aaKnown RBP15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 SLC5A3P53794 718 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 RPL10AP62906 217 aaKnown RBP15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 PSMD6Q15008 389 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 KCNT1Q5JUK3 1230 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 TTC39BQ5VTQ0 682 aaPredicted RBP15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 DCUN1D2Q6PH85 259 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 FASTKD5Q7L8L6 764 aaKnown RBP15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 NAT8LQ8N9F0 302 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 WDR18Q9BV38 432 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 CXorf49A8MYA2 514 aaPredicted RBP15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 KLHL2O95198 593 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 SNRPAP09012 282 aaKnown RBP15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 CD48P09326 243 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 PEX3P56589 373 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 SMAD1Q15797 465 aaKnown RBP15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 TEX44Q53QW1 395 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 ANGEL2Q5VTE6 544 aaKnown RBP15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 PGM2L1Q6PCE3 622 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 SV2AQ7L0J3 742 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 MON1BQ7L1V2 547 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 HAUS6Q7Z4H7 955 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 CRYGNQ8WXF5 182 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 MCEEQ96PE7 176 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 ZNF696Q9H7X3 374 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 C1orf112Q9NSG2 853 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 DRG1Q9Y295 367 aaKnown RBP15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 ITGAVP06756 1048 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 PDAP1Q13442 181 aaKnown RBP15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 TFDP3Q5H9I0 405 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 SPOPLQ6IQ16 392 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 SH2D5Q6ZV89 423 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 SLC26A11Q86WA9 606 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 CROCCP3Q8IVE0 287 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 UNC45BQ8IWX7 931 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 CPNE9Q8IYJ1 553 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 PHTF2Q8N3S3 785 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 AGR3Q8TD06 166 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 C17orf75Q9HAS0 396 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 RAVER2Q9HCJ3 691 aaKnown RBP15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 MAN1C1Q9NR34 630 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 RAB26Q9ULW5 256 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 hCG_1818297A0A087WSY0 165 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 CST8O60676 142 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 PEX10O60683 326 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 SERPINB7O75635 380 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 OCM2P0CE71 109 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 OCMP0CE72 109 aaPredicted RBP15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 PSMC3P17980 439 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 KCNA4P22459 653 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 SPP2Q13103 211 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 PDPK2PQ6A1A2 396 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 FEZF2Q8TBJ5 459 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 TFB1MQ8WVM0 346 aaKnown RBP15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 OSBPL6Q9BZF3 934 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 COQ6Q9Y2Z9 468 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 PPME1Q9Y570 386 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 PCDHB2Q9Y5E7 798 aa15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 ZNFX1Q9P2E3 1918 aaKnown RBP15.19■□□□□ 0.02
NCKIPSD-204ENST00000416649 KANSL1LA0AUZ9 987 aa15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 CBFA2T3O75081 653 aa15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 TCN1P20061 433 aaPredicted RBP15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 CDH15P55291 814 aa15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 WASHC5Q12768 1159 aa15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 FLOT2Q14254 428 aa15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 NANOGNBQ7Z5D8 188 aa15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 CLVS1Q8IUQ0 354 aaPredicted RBP15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 PIWIL2Q8TC59 973 aaKnown RBP15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 TRPM4Q8TD43 1214 aa15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 CMTM5Q96DZ9 223 aa15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 TBC1D23Q9NUY8 699 aa15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 PNPOQ9NVS9 261 aa15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 PLK2Q9NYY3 685 aa15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 SIRPGQ9P1W8 387 aa15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 TRIM17Q9Y577 477 aa15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 MYH9P35579 1960 aaKnown RBP15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 LSM1O15116 133 aaKnown RBP15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 KLHL41O60662 606 aa15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 NPM3O75607 178 aaKnown RBP15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 DGKIO75912 1065 aa15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 IL1BP01584 269 aa15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 PKNOX1P55347 436 aa15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 TMEM270Q6UE05 265 aa15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 CCDC80Q76M96 950 aa15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 NLRP7Q8WX94 980 aa15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 PPP1R36Q96LQ0 422 aa15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 KCNK16Q96T55 309 aa15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 NUF2Q9BZD4 464 aa15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 TMEM8AQ9HCN3 771 aa15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 THAP1Q9NVV9 213 aa15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 TRNAU1APQ9NX07 287 aaKnown RBP15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 C6orf203Q9P0P8 240 aaPredicted RBP15.18■□□□□ 0.02
NCKIPSD-204ENST00000416649 TMX2-CTNND1H3BSU7 103 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms