RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 DUSP9Q99956 384 aaKnown RBP13.96□□□□□ -0.17
CTHRC1-202ENST00000415886 MED10Q9BTT4 135 aa13.96□□□□□ -0.17
CTHRC1-202ENST00000415886 NACA2Q9H009 215 aa13.96□□□□□ -0.17
CTHRC1-202ENST00000415886 MMRN2Q9H8L6 949 aa13.96□□□□□ -0.17
CTHRC1-202ENST00000415886 CHMP5Q9NZZ3 219 aa13.96□□□□□ -0.17
CTHRC1-202ENST00000415886 PCDHA5Q9Y5H7 936 aa13.96□□□□□ -0.17
CTHRC1-202ENST00000415886 MYO18AQ92614 2054 aaKnown RBP13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 NDUFS2O75306 463 aa13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 PIK3CAP42336 1068 aa13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 GCLMP48507 274 aa13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 TUBP50607 506 aa13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 GRIK2Q13002 908 aa13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 EDRF1Q3B7T1 1238 aa13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 ZACNQ401N2 412 aa13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 ISM2Q6H9L7 571 aa13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 SDE2Q6IQ49 451 aa13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 KIAA1324Q6UXG2 1013 aaKnown RBP13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 CCNI2Q6ZMN8 369 aaPredicted RBP13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 TPGS1Q6ZTW0 290 aa13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 PAQR9Q6ZVX9 377 aa13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 ELOA2Q8IYF1 753 aaPredicted RBP13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 MDM1Q8TC05 714 aa13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 PLEKHO2Q8TD55 490 aa13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 MRGPRX1Q96LB2 322 aa13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 GABRG3Q99928 467 aa13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 BBS2Q9BXC9 721 aa13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 FAM124BQ9H5Z6 455 aaPredicted RBP13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 CCDC86Q9H6F5 360 aaKnown RBP13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 SMYD3Q9H7B4 428 aa13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 VRTNQ9H8Y1 702 aa13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 DMAP1Q9NPF5 467 aaPredicted RBP13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 CACNA2D2Q9NY47 1150 aa13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 IL37Q9NZH6 218 aa13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 SUSD2Q9UGT4 822 aa13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 GON4LQ3T8J9 2241 aa13.95□□□□□ -0.18
CTHRC1-202ENST00000415886 ATP8B3O60423 1300 aa13.94□□□□□ -0.18
CTHRC1-202ENST00000415886 WASH3PC4AMC7 463 aa13.94□□□□□ -0.18
CTHRC1-202ENST00000415886 CACNG3O60359 315 aa13.94□□□□□ -0.18
CTHRC1-202ENST00000415886 GREM1O60565 184 aa13.94□□□□□ -0.18
CTHRC1-202ENST00000415886 ZDHHC11BP0C7U3 371 aa13.94□□□□□ -0.18
CTHRC1-202ENST00000415886 TYRP14679 529 aa13.94□□□□□ -0.18
CTHRC1-202ENST00000415886 GNSP15586 552 aa13.94□□□□□ -0.18
CTHRC1-202ENST00000415886 PPP1R2P41236 205 aa13.94□□□□□ -0.18
CTHRC1-202ENST00000415886 PRCPP42785 496 aa13.94□□□□□ -0.18
CTHRC1-202ENST00000415886 CDH8P55286 799 aa13.94□□□□□ -0.18
CTHRC1-202ENST00000415886 FKBP3Q00688 224 aaKnown RBP13.94□□□□□ -0.18
CTHRC1-202ENST00000415886 SYCP2LQ5T4T6 812 aa13.94□□□□□ -0.18
CTHRC1-202ENST00000415886 HTR3DQ70Z44 454 aa13.94□□□□□ -0.18
CTHRC1-202ENST00000415886 SLCO6A1Q86UG4 719 aa13.94□□□□□ -0.18
CTHRC1-202ENST00000415886 ERCC4Q92889 916 aaPredicted RBP13.94□□□□□ -0.18
CTHRC1-202ENST00000415886 ELMO3Q96BJ8 720 aa13.94□□□□□ -0.18
CTHRC1-202ENST00000415886 XPO6Q96QU8 1125 aaKnown RBP13.94□□□□□ -0.18
CTHRC1-202ENST00000415886 GZF1Q9H116 711 aaPredicted RBP13.94□□□□□ -0.18
CTHRC1-202ENST00000415886 XYLT2Q9H1B5 865 aa13.94□□□□□ -0.18
CTHRC1-202ENST00000415886 KRT82Q9NSB4 513 aa13.94□□□□□ -0.18
CTHRC1-202ENST00000415886 PLXNB3Q9ULL4 1909 aa13.94□□□□□ -0.18
CTHRC1-202ENST00000415886 FAM92AA1XBS5 289 aa13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 MEI4A8MW99 385 aa13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 PSMA7O14818 248 aa13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 TLR5O60602 858 aa13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 CBFA2T3O75081 653 aa13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 AP1G2O75843 785 aa13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 VNN1O95497 513 aa13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 TBX18O95935 607 aa13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 HLA-DRAP01903 254 aa13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 GTF2H1P32780 548 aa13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 ENPEPQ07075 957 aa13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 WDR45BQ5MNZ6 344 aa13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 TCERG1LQ5VWI1 586 aa13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 KRT39Q6A163 491 aa13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 SCARA5Q6ZMJ2 495 aa13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 ZCCHC9Q8N567 271 aaKnown RBP13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 ZMIZ2Q8NF64 920 aa13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 HNRNPLLQ8WVV9 542 aaKnown RBP13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 FOXJ1Q92949 421 aa13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 BHMTQ93088 406 aa13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 EEF2KMTQ96G04 330 aa13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 SMARCD1Q96GM5 515 aa13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 KLF16Q9BXK1 252 aaPredicted RBP13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 IL21RQ9HBE5 538 aa13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 MARK1Q9P0L2 795 aa13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 PCOLCE2Q9UKZ9 415 aa13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 APOBEC2Q9Y235 224 aaKnown RBP13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 RAXQ9Y2V3 346 aa13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 DMXL2Q8TDJ6 3036 aa13.93□□□□□ -0.18
CTHRC1-202ENST00000415886 GADD45BO75293 160 aaPredicted RBP13.92□□□□□ -0.18
CTHRC1-202ENST00000415886 BEST1O76090 585 aa13.92□□□□□ -0.18
CTHRC1-202ENST00000415886 TRIM49P0CI25 452 aa13.92□□□□□ -0.18
CTHRC1-202ENST00000415886 TRIM49CP0CI26 452 aa13.92□□□□□ -0.18
CTHRC1-202ENST00000415886 CCDC130P13994 396 aa13.92□□□□□ -0.18
CTHRC1-202ENST00000415886 CD6P30203 668 aa13.92□□□□□ -0.18
CTHRC1-202ENST00000415886 DGKGP49619 791 aa13.92□□□□□ -0.18
CTHRC1-202ENST00000415886 ANKRD40Q6AI12 368 aa13.92□□□□□ -0.18
CTHRC1-202ENST00000415886 UNC93AQ86WB7 457 aa13.92□□□□□ -0.18
CTHRC1-202ENST00000415886 FUKQ8N0W3 1084 aa13.92□□□□□ -0.18
CTHRC1-202ENST00000415886 P2RY11Q96G91 374 aa13.92□□□□□ -0.18
CTHRC1-202ENST00000415886 TOE1Q96GM8 510 aaKnown RBP13.92□□□□□ -0.18
CTHRC1-202ENST00000415886 DHTKD1Q96HY7 919 aaPredicted RBP13.92□□□□□ -0.18
CTHRC1-202ENST00000415886 SMOQ99835 787 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms