RNA–Protein interactions for RNA: ENST00000415807.6

FNDC3B-202, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 5,083 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-202ENST00000415807 SAPCD2Q86UD0 394 aa12.08□□□□□ -0.47
FNDC3B-202ENST00000415807 MICAL1Q8TDZ2 1067 aa12.08□□□□□ -0.47
FNDC3B-202ENST00000415807 B3GALT6Q96L58 329 aa12.08□□□□□ -0.47
FNDC3B-202ENST00000415807 NRDE2Q9H7Z3 1164 aa12.08□□□□□ -0.47
FNDC3B-202ENST00000415807 PTPRHQ9HD43 1115 aa12.08□□□□□ -0.47
FNDC3B-202ENST00000415807 TLK1Q9UKI8 766 aa12.08□□□□□ -0.47
FNDC3B-202ENST00000415807 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 ARL5CA6NH57 179 aa12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 SPTLC1O15269 473 aa12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 KBTBD12Q3ZCT8 623 aa12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 RASSF3Q86WH2 238 aa12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 ZCCHC9Q8N567 271 aaKnown RBP12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 ARMC2Q8NEN0 867 aa12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 PIK3R5Q8WYR1 880 aa12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 FAM136AQ96C01 138 aa12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 SFMBT1Q9UHJ3 866 aa12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 ENDOD1O94919 500 aa12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 APOEP02649 317 aa12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 FGFR1P11362 822 aa12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 HTRA3P83110 453 aa12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 SPATA21Q7Z572 469 aa12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 ATPAF2Q8N5M1 289 aa12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 PPP4R1Q8TF05 950 aa12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 MYLPFQ96A32 169 aa12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 PAAF1Q9BRP4 392 aa12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 ZBED2Q9BTP6 218 aa12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 PRDM12Q9H4Q4 367 aa12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 C2CD4BA6NLJ0 364 aa12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 PURAQ00577 322 aaKnown RBP12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 POU5F1BQ06416 359 aa12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 NUDCD3Q8IVD9 361 aa12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 GIPC2Q8TF65 315 aa12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 SP110Q9HB58 689 aa12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 POPDC2Q9HBU9 364 aa12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 SHOC2Q9UQ13 582 aa12.08□□□□□ -0.48
FNDC3B-202ENST00000415807 CFAP69A5D8W1 941 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 RNF103O00237 685 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 MSI1O43347 362 aaKnown RBP12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 PYGBP11216 843 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 GARSP41250 739 aaKnown RBP12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 MARCH8Q5T0T0 291 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 STAMBPL1Q96FJ0 436 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 SENP6Q9GZR1 1112 aaPredicted RBP12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 LRRC4CQ9HCJ2 640 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 TRPC7Q9HCX4 862 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 HMX1Q9NP08 348 aaPredicted RBP12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 A0A1W2PPM1 405 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 SERPINB6P35237 376 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 SPATS2Q86XZ4 545 aaKnown RBP12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 HTR3CQ8WXA8 447 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 TRIB2Q92519 343 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 KAT2BQ92831 832 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 PCED1BQ96HM7 432 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 RNF208Q9H0X6 261 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 DDX20Q9UHI6 824 aaKnown RBP12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 QSER1Q2KHR3 1735 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 KPNA6O60684 536 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 SYPL2Q5VXT5 272 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 RFX8Q6ZV50 586 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 FAM35AQ86V20 835 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 PLD5Q8N7P1 536 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 PPARGC1AQ9UBK2 798 aaKnown RBP12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 ARFGEF1Q9Y6D6 1849 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 WDR27A2RRH5 827 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 ARHGAP42A6NI28 874 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 TMEM88BA6NKF7 163 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 NR1H3Q13133 447 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 POLNQ7Z5Q5 900 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 ANKS1BQ7Z6G8 1248 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 ZNF467Q7Z7K2 595 aaPredicted RBP12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 WNT8BQ93098 351 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 SMARCD1Q96GM5 515 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 SH3GL2Q99962 352 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 MAF1Q9H063 256 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 OR12D3Q9UGF7 316 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 CEP290O15078 2479 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 PHIPQ8WWQ0 1821 aa12.07□□□□□ -0.48
FNDC3B-202ENST00000415807 TBKBP1A7MCY6 615 aa12.06□□□□□ -0.48
FNDC3B-202ENST00000415807 PITX1P78337 314 aaPredicted RBP12.06□□□□□ -0.48
FNDC3B-202ENST00000415807 QPCTQ16769 361 aa12.06□□□□□ -0.48
FNDC3B-202ENST00000415807 HFE2Q6ZVN8 426 aa12.06□□□□□ -0.48
FNDC3B-202ENST00000415807 ATAD1Q8NBU5 361 aa12.06□□□□□ -0.48
FNDC3B-202ENST00000415807 FBXO32Q969P5 355 aa12.06□□□□□ -0.48
FNDC3B-202ENST00000415807 CAPNS2Q96L46 248 aa12.06□□□□□ -0.48
FNDC3B-202ENST00000415807 DUSP16Q9BY84 665 aa12.06□□□□□ -0.48
FNDC3B-202ENST00000415807 BCO2Q9BYV7 579 aa12.06□□□□□ -0.48
FNDC3B-202ENST00000415807 FAM129AQ9BZQ8 928 aa12.06□□□□□ -0.48
FNDC3B-202ENST00000415807 AGO3Q9H9G7 860 aaKnown RBP12.06□□□□□ -0.48
FNDC3B-202ENST00000415807 TCRBV7S3A2A0A539 114 aa12.06□□□□□ -0.48
FNDC3B-202ENST00000415807 YJEFN3A6XGL0 299 aa12.06□□□□□ -0.48
FNDC3B-202ENST00000415807 E7ENQ6 273 aa12.06□□□□□ -0.48
FNDC3B-202ENST00000415807 SEPT4O43236 478 aa12.06□□□□□ -0.48
FNDC3B-202ENST00000415807 CA12O43570 354 aa12.06□□□□□ -0.48
FNDC3B-202ENST00000415807 MGAT1P26572 445 aa12.06□□□□□ -0.48
FNDC3B-202ENST00000415807 MRPS5P82675 430 aaKnown RBP12.06□□□□□ -0.48
FNDC3B-202ENST00000415807 FAAP100Q0VG06 881 aa12.06□□□□□ -0.48
FNDC3B-202ENST00000415807 FNBP1LQ5T0N5 605 aa12.06□□□□□ -0.48
FNDC3B-202ENST00000415807 CHSY1Q86X52 802 aa12.06□□□□□ -0.48
FNDC3B-202ENST00000415807 PGM2Q96G03 612 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms