RNA–Protein interactions for RNA: ENST00000415585.6

CSTF2-203, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 1 (best) BASIC

Gene CSTF2, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-203ENST00000415585 CES4AQ5XG92 561 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 C4orf22Q6V702 233 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 USP50Q70EL3 339 aaPredicted RBP13.78□□□□□ -0.2
CSTF2-203ENST00000415585 ARMCX2Q7L311 632 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 TRIM42Q8IWZ5 723 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.78□□□□□ -0.2
CSTF2-203ENST00000415585 MPP5Q8N3R9 675 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 GSDMBQ8TAX9 411 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 C7orf26Q96N11 449 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 EBNA1BP2Q99848 306 aaKnown RBP13.78□□□□□ -0.2
CSTF2-203ENST00000415585 SUFUQ9UMX1 484 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 SNX9Q9Y5X1 595 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 MAD1L1Q9Y6D9 718 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 HMX2A2RU54 273 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 FAM159BA6NKW6 160 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 GCATO75600 419 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 ZNF286BP0CG31 522 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 ESRRAP11474 423 aaPredicted RBP13.78□□□□□ -0.2
CSTF2-203ENST00000415585 DESP17661 470 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 TPSB2P20231 275 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 ATXN1P54253 815 aaKnown RBP13.78□□□□□ -0.2
CSTF2-203ENST00000415585 TMPRSS15P98073 1019 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 LAMC2Q13753 1193 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 TPSAB1Q15661 275 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 DPYSL2Q16555 572 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 FAM91A1Q658Y4 838 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 MTHFD1LQ6UB35 978 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 ALYREFQ86V81 257 aaKnown RBP13.78□□□□□ -0.2
CSTF2-203ENST00000415585 E2F7Q96AV8 911 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 MTBPQ96DY7 904 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 MAGEB5Q9BZ81 275 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 NMUR2Q9GZQ4 415 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 MROH8Q9H579 483 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 KCNK4Q9NYG8 393 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 TAS2R1Q9NYW7 299 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 SIRPGQ9P1W8 387 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 HESX1Q9UBX0 185 aa13.78□□□□□ -0.2
CSTF2-203ENST00000415585 ASB14A6NK59 587 aa13.77□□□□□ -0.21
CSTF2-203ENST00000415585 CYB561D2O14569 222 aa13.77□□□□□ -0.21
CSTF2-203ENST00000415585 KIF1CO43896 1103 aaKnown RBP13.77□□□□□ -0.21
CSTF2-203ENST00000415585 LUC7L3O95232 432 aaKnown RBP13.77□□□□□ -0.21
CSTF2-203ENST00000415585 GRM5P41594 1212 aa13.77□□□□□ -0.21
CSTF2-203ENST00000415585 ABL2P42684 1182 aa13.77□□□□□ -0.21
CSTF2-203ENST00000415585 PTPN9P43378 593 aa13.77□□□□□ -0.21
CSTF2-203ENST00000415585 OCRLQ01968 901 aa13.77□□□□□ -0.21
CSTF2-203ENST00000415585 CHI3L2Q15782 390 aa13.77□□□□□ -0.21
CSTF2-203ENST00000415585 HSF5Q4G112 596 aaPredicted RBP13.77□□□□□ -0.21
CSTF2-203ENST00000415585 TEX44Q53QW1 395 aa13.77□□□□□ -0.21
CSTF2-203ENST00000415585 ATG16L1Q676U5 607 aa13.77□□□□□ -0.21
CSTF2-203ENST00000415585 ZDHHC17Q8IUH5 632 aa13.77□□□□□ -0.21
CSTF2-203ENST00000415585 CCDC33Q8N5R6 958 aa13.77□□□□□ -0.21
CSTF2-203ENST00000415585 CLEC4CQ8WTT0 213 aa13.77□□□□□ -0.21
CSTF2-203ENST00000415585 LPIN3Q9BQK8 851 aa13.77□□□□□ -0.21
CSTF2-203ENST00000415585 C11orf84Q9BUA3 381 aaPredicted RBP13.77□□□□□ -0.21
CSTF2-203ENST00000415585 DHX35Q9H5Z1 703 aaKnown RBP13.77□□□□□ -0.21
CSTF2-203ENST00000415585 ARHGEF4Q9NR80 690 aa13.77□□□□□ -0.21
CSTF2-203ENST00000415585 PCMTD2Q9NV79 361 aa13.77□□□□□ -0.21
CSTF2-203ENST00000415585 ARMCX1Q9P291 453 aa13.77□□□□□ -0.21
CSTF2-203ENST00000415585 MYO18AQ92614 2054 aaKnown RBP13.77□□□□□ -0.21
CSTF2-203ENST00000415585 COL1A2P08123 1366 aa13.77□□□□□ -0.21
CSTF2-203ENST00000415585 CCDC195A0A1B0GUA6 201 aa13.76□□□□□ -0.21
CSTF2-203ENST00000415585 SPDYE5A6NIY4 337 aa13.76□□□□□ -0.21
CSTF2-203ENST00000415585 A6NJR5 290 aa13.76□□□□□ -0.21
CSTF2-203ENST00000415585 GRIA1P42261 906 aa13.76□□□□□ -0.21
CSTF2-203ENST00000415585 MROH9Q5TGP6 573 aa13.76□□□□□ -0.21
CSTF2-203ENST00000415585 TAPT1Q6NXT6 567 aa13.76□□□□□ -0.21
CSTF2-203ENST00000415585 KCNT2Q6UVM3 1135 aa13.76□□□□□ -0.21
CSTF2-203ENST00000415585 MAMDC4Q6UXC1 1216 aa13.76□□□□□ -0.21
CSTF2-203ENST00000415585 APBB1IPQ7Z5R6 666 aaPredicted RBP13.76□□□□□ -0.21
CSTF2-203ENST00000415585 NUDCD3Q8IVD9 361 aa13.76□□□□□ -0.21
CSTF2-203ENST00000415585 ARID3BQ8IVW6 561 aaPredicted RBP13.76□□□□□ -0.21
CSTF2-203ENST00000415585 MCUR1Q96AQ8 359 aa13.76□□□□□ -0.21
CSTF2-203ENST00000415585 ZMAT2Q96NC0 199 aaKnown RBP13.76□□□□□ -0.21
CSTF2-203ENST00000415585 QKIQ96PU8 341 aaKnown RBP eCLIP13.76□□□□□ -0.21
CSTF2-203ENST00000415585 ZNF395Q9H8N7 513 aaPredicted RBP13.76□□□□□ -0.21
CSTF2-203ENST00000415585 MTMR10Q9NXD2 777 aa13.76□□□□□ -0.21
CSTF2-203ENST00000415585 KCNH4Q9UQ05 1017 aa13.76□□□□□ -0.21
CSTF2-203ENST00000415585 PCDHA11Q9Y5I1 949 aa13.76□□□□□ -0.21
CSTF2-203ENST00000415585 ZNF638Q14966 1978 aaKnown RBP13.76□□□□□ -0.21
CSTF2-203ENST00000415585 LIN7AO14910 233 aaPredicted RBP13.76□□□□□ -0.21
CSTF2-203ENST00000415585 RARBP10826 455 aa13.76□□□□□ -0.21
CSTF2-203ENST00000415585 ZFXP17010 805 aaPredicted RBP13.76□□□□□ -0.21
CSTF2-203ENST00000415585 CRHR1P34998 444 aa13.76□□□□□ -0.21
CSTF2-203ENST00000415585 NR2C2P49116 596 aa13.76□□□□□ -0.21
CSTF2-203ENST00000415585 SNX16P57768 344 aa13.76□□□□□ -0.21
CSTF2-203ENST00000415585 BLMHQ13867 455 aa13.76□□□□□ -0.21
CSTF2-203ENST00000415585 KPNB1Q14974 876 aaKnown RBP13.76□□□□□ -0.21
CSTF2-203ENST00000415585 ACSBG2Q5FVE4 666 aa13.76□□□□□ -0.21
CSTF2-203ENST00000415585 TRIM68Q6AZZ1 485 aa13.76□□□□□ -0.21
CSTF2-203ENST00000415585 NDUFAF2Q8N183 169 aa13.76□□□□□ -0.21
CSTF2-203ENST00000415585 PPTC7Q8NI37 304 aa13.76□□□□□ -0.21
CSTF2-203ENST00000415585 CENPIQ92674 756 aaPredicted RBP13.76□□□□□ -0.21
CSTF2-203ENST00000415585 KCTD15Q96SI1 283 aaPredicted RBP13.76□□□□□ -0.21
CSTF2-203ENST00000415585 C16orf70Q9BSU1 422 aa13.76□□□□□ -0.21
CSTF2-203ENST00000415585 FAM167BQ9BTA0 163 aa13.76□□□□□ -0.21
CSTF2-203ENST00000415585 DPEP3Q9H4B8 488 aa13.76□□□□□ -0.21
CSTF2-203ENST00000415585 XAB2Q9HCS7 855 aaKnown RBP13.76□□□□□ -0.21
CSTF2-203ENST00000415585 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.76□□□□□ -0.21
CSTF2-203ENST00000415585 AP4E1Q9UPM8 1137 aa13.76□□□□□ -0.21
CSTF2-203ENST00000415585 CAPN14A8MX76 684 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms