RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 UBXN2BQ14CS0 331 aa15.28■□□□□ 0.04
LIMS1-206ENST00000414829 TSR1Q2NL82 804 aaKnown RBP15.28■□□□□ 0.04
LIMS1-206ENST00000414829 NUDT18Q6ZVK8 323 aa15.28■□□□□ 0.04
LIMS1-206ENST00000414829 FAM183BPQ6ZVS7 135 aa15.28■□□□□ 0.04
LIMS1-206ENST00000414829 ARCQ7LC44 396 aa15.28■□□□□ 0.04
LIMS1-206ENST00000414829 RIN3Q8TB24 985 aa15.28■□□□□ 0.04
LIMS1-206ENST00000414829 CLEC4CQ8WTT0 213 aa15.28■□□□□ 0.04
LIMS1-206ENST00000414829 SLC20A1Q8WUM9 679 aa15.28■□□□□ 0.04
LIMS1-206ENST00000414829 SLC2A13Q96QE2 648 aa15.28■□□□□ 0.04
LIMS1-206ENST00000414829 LRFN3Q9BTN0 628 aa15.28■□□□□ 0.04
LIMS1-206ENST00000414829 LTB4R2Q9NPC1 389 aa15.28■□□□□ 0.04
LIMS1-206ENST00000414829 NUDT5Q9UKK9 219 aa15.28■□□□□ 0.04
LIMS1-206ENST00000414829 TLR6Q9Y2C9 796 aa15.28■□□□□ 0.04
LIMS1-206ENST00000414829 ANKRD62A6NC57 917 aa15.27■□□□□ 0.04
LIMS1-206ENST00000414829 MDM4O15151 490 aa15.27■□□□□ 0.04
LIMS1-206ENST00000414829 HOXC11O43248 304 aaPredicted RBP15.27■□□□□ 0.04
LIMS1-206ENST00000414829 APOEP02649 317 aa15.27■□□□□ 0.04
LIMS1-206ENST00000414829 CYBBP04839 570 aa15.27■□□□□ 0.04
LIMS1-206ENST00000414829 ADH5P11766 374 aa15.27■□□□□ 0.04
LIMS1-206ENST00000414829 ARSAP15289 507 aa15.27■□□□□ 0.04
LIMS1-206ENST00000414829 TNFAIP3P21580 790 aa15.27■□□□□ 0.04
LIMS1-206ENST00000414829 GSCP56915 257 aaPredicted RBP15.27■□□□□ 0.04
LIMS1-206ENST00000414829 GAD2Q05329 585 aa15.27■□□□□ 0.04
LIMS1-206ENST00000414829 C1QBPQ07021 282 aaKnown RBP15.27■□□□□ 0.04
LIMS1-206ENST00000414829 DHCR24Q15392 516 aa15.27■□□□□ 0.04
LIMS1-206ENST00000414829 CLEC16AQ2KHT3 1053 aa15.27■□□□□ 0.04
LIMS1-206ENST00000414829 TDRD12Q587J7 1177 aaKnown RBP15.27■□□□□ 0.04
LIMS1-206ENST00000414829 DCAF6Q58WW2 860 aa15.27■□□□□ 0.04
LIMS1-206ENST00000414829 FAM102AQ5T9C2 384 aaPredicted RBP15.27■□□□□ 0.04
LIMS1-206ENST00000414829 CWF19L1Q69YN2 538 aaKnown RBP15.27■□□□□ 0.04
LIMS1-206ENST00000414829 TRIM68Q6AZZ1 485 aa15.27■□□□□ 0.04
LIMS1-206ENST00000414829 Q6ZNB5 142 aa15.27■□□□□ 0.04
LIMS1-206ENST00000414829 IRF2BP2Q7Z5L9 587 aa15.27■□□□□ 0.04
LIMS1-206ENST00000414829 PHF13Q86YI8 300 aaPredicted RBP15.27■□□□□ 0.04
LIMS1-206ENST00000414829 BBS7Q8IWZ6 715 aa15.27■□□□□ 0.04
LIMS1-206ENST00000414829 DQX1Q8TE96 717 aaKnown RBP15.27■□□□□ 0.04
LIMS1-206ENST00000414829 CPA5Q8WXQ8 436 aa15.27■□□□□ 0.04
LIMS1-206ENST00000414829 NDRG1Q92597 394 aaKnown RBP15.27■□□□□ 0.04
LIMS1-206ENST00000414829 TRIM11Q96F44 468 aa15.27■□□□□ 0.04
LIMS1-206ENST00000414829 TRIM5Q9C035 493 aa15.27■□□□□ 0.04
LIMS1-206ENST00000414829 KCNH6Q9H252 994 aa15.27■□□□□ 0.04
LIMS1-206ENST00000414829 ZNHIT6Q9NWK9 470 aaKnown RBP15.27■□□□□ 0.04
LIMS1-206ENST00000414829 HCN4Q9Y3Q4 1203 aa15.27■□□□□ 0.04
LIMS1-206ENST00000414829 OBSL1O75147 1896 aa15.27■□□□□ 0.03
LIMS1-206ENST00000414829 IRAK2O43187 625 aa15.26■□□□□ 0.03
LIMS1-206ENST00000414829 IGLV3-27P01718 113 aa15.26■□□□□ 0.03
LIMS1-206ENST00000414829 CYP17A1P05093 508 aa15.26■□□□□ 0.03
LIMS1-206ENST00000414829 UNGP13051 313 aaPredicted RBP15.26■□□□□ 0.03
LIMS1-206ENST00000414829 CHRNB2P17787 502 aa15.26■□□□□ 0.03
LIMS1-206ENST00000414829 DRD1P21728 446 aa15.26■□□□□ 0.03
LIMS1-206ENST00000414829 NOS2P35228 1153 aa15.26■□□□□ 0.03
LIMS1-206ENST00000414829 MATKP42679 507 aa15.26■□□□□ 0.03
LIMS1-206ENST00000414829 RPS9P46781 194 aaKnown RBP15.26■□□□□ 0.03
LIMS1-206ENST00000414829 TBX4P57082 545 aa15.26■□□□□ 0.03
LIMS1-206ENST00000414829 FBXO43Q4G163 708 aa15.26■□□□□ 0.03
LIMS1-206ENST00000414829 DGKKQ5KSL6 1271 aa15.26■□□□□ 0.03
LIMS1-206ENST00000414829 ACBD5Q5T8D3 534 aaPredicted RBP15.26■□□□□ 0.03
LIMS1-206ENST00000414829 MMS22LQ6ZRQ5 1243 aa15.26■□□□□ 0.03
LIMS1-206ENST00000414829 XYLT1Q86Y38 959 aa15.26■□□□□ 0.03
LIMS1-206ENST00000414829 VSTM4Q8IW00 320 aa15.26■□□□□ 0.03
LIMS1-206ENST00000414829 ADGRG2Q8IZP9 1017 aa15.26■□□□□ 0.03
LIMS1-206ENST00000414829 SYNPOQ8N3V7 929 aa15.26■□□□□ 0.03
LIMS1-206ENST00000414829 CPXM2Q8N436 756 aa15.26■□□□□ 0.03
LIMS1-206ENST00000414829 ZNF557Q8N988 423 aaPredicted RBP15.26■□□□□ 0.03
LIMS1-206ENST00000414829 AZIN2Q96A70 460 aa15.26■□□□□ 0.03
LIMS1-206ENST00000414829 VCPIP1Q96JH7 1222 aa15.26■□□□□ 0.03
LIMS1-206ENST00000414829 FAM204AQ9H8W3 233 aa15.26■□□□□ 0.03
LIMS1-206ENST00000414829 SPHK2Q9NRA0 654 aa15.26■□□□□ 0.03
LIMS1-206ENST00000414829 ADAM22Q9P0K1 906 aa15.26■□□□□ 0.03
LIMS1-206ENST00000414829 SLC12A6Q9UHW9 1150 aa15.26■□□□□ 0.03
LIMS1-206ENST00000414829 TECTAO75443 2155 aa15.25■□□□□ 0.03
LIMS1-206ENST00000414829 MYO16Q9Y6X6 1858 aa15.25■□□□□ 0.03
LIMS1-206ENST00000414829 TYW5A2RUC4 315 aaKnown RBP15.25■□□□□ 0.03
LIMS1-206ENST00000414829 FAM170BA6NMN3 283 aa15.25■□□□□ 0.03
LIMS1-206ENST00000414829 TRDMT1O14717 391 aaKnown RBP15.25■□□□□ 0.03
LIMS1-206ENST00000414829 GREM1O60565 184 aa15.25■□□□□ 0.03
LIMS1-206ENST00000414829 F9P00740 461 aa15.25■□□□□ 0.03
LIMS1-206ENST00000414829 GYPCP04921 128 aa15.25■□□□□ 0.03
LIMS1-206ENST00000414829 SERPING1P05155 500 aa15.25■□□□□ 0.03
LIMS1-206ENST00000414829 HMBSP08397 361 aa15.25■□□□□ 0.03
LIMS1-206ENST00000414829 GJA4P35212 333 aa15.25■□□□□ 0.03
LIMS1-206ENST00000414829 E2F5Q15329 346 aa15.25■□□□□ 0.03
LIMS1-206ENST00000414829 SND1Q7KZF4 910 aaKnown RBP eCLIP15.25■□□□□ 0.03
LIMS1-206ENST00000414829 TAC4Q86UU9 113 aa15.25■□□□□ 0.03
LIMS1-206ENST00000414829 CNGA4Q8IV77 575 aa15.25■□□□□ 0.03
LIMS1-206ENST00000414829 XPO6Q96QU8 1125 aaKnown RBP15.25■□□□□ 0.03
LIMS1-206ENST00000414829 P2RY13Q9BPV8 354 aa15.25■□□□□ 0.03
LIMS1-206ENST00000414829 C11orf70Q9BRQ4 267 aa15.25■□□□□ 0.03
LIMS1-206ENST00000414829 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.25■□□□□ 0.03
LIMS1-206ENST00000414829 MARK1Q9P0L2 795 aa15.25■□□□□ 0.03
LIMS1-206ENST00000414829 SFMBT1Q9UHJ3 866 aa15.25■□□□□ 0.03
LIMS1-206ENST00000414829 STOML2Q9UJZ1 356 aa15.25■□□□□ 0.03
LIMS1-206ENST00000414829 NAALADL1Q9UQQ1 740 aa15.25■□□□□ 0.03
LIMS1-206ENST00000414829 MYH10P35580 1976 aa15.25■□□□□ 0.03
LIMS1-206ENST00000414829 DENND4CQ5VZ89 1909 aa15.24■□□□□ 0.03
LIMS1-206ENST00000414829 MSI1O43347 362 aaKnown RBP15.24■□□□□ 0.03
LIMS1-206ENST00000414829 TRUB2O95900 331 aaKnown RBP15.24■□□□□ 0.03
LIMS1-206ENST00000414829 PDGFBP01127 241 aaPredicted RBP15.24■□□□□ 0.03
LIMS1-206ENST00000414829 MYBL1P10243 752 aa15.24■□□□□ 0.03
LIMS1-206ENST00000414829 GZMAP12544 262 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms