RNA–Protein interactions for RNA: ENST00000414822.7

CDKN1C-202, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDKN1C, Length 2,051 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-202ENST00000414822 PSTKQ8IV42 348 aaKnown RBP22.72■■□□□ 1.23
CDKN1C-202ENST00000414822 UHMK1Q8TAS1 419 aaKnown RBP22.72■■□□□ 1.23
CDKN1C-202ENST00000414822 TOX2Q96NM4 488 aa22.72■■□□□ 1.23
CDKN1C-202ENST00000414822 MRPL9Q9BYD2 267 aaKnown RBP22.72■■□□□ 1.23
CDKN1C-202ENST00000414822 DDIT4Q9NX09 232 aa22.72■■□□□ 1.23
CDKN1C-202ENST00000414822 MARCH5Q9NX47 278 aa22.72■■□□□ 1.23
CDKN1C-202ENST00000414822 USP3Q9Y6I4 520 aa22.72■■□□□ 1.23
CDKN1C-202ENST00000414822 NT5C1B-RDH14C9J2C7 533 aa22.72■■□□□ 1.23
CDKN1C-202ENST00000414822 PARNO95453 639 aaKnown RBP22.72■■□□□ 1.23
CDKN1C-202ENST00000414822 NUDT17P0C025 328 aa22.72■■□□□ 1.23
CDKN1C-202ENST00000414822 RPL22P35268 128 aaKnown RBP22.72■■□□□ 1.23
CDKN1C-202ENST00000414822 SLC5A3P53794 718 aa22.72■■□□□ 1.23
CDKN1C-202ENST00000414822 EIF3BP55884 814 aaKnown RBP22.72■■□□□ 1.23
CDKN1C-202ENST00000414822 TRMT10CQ7L0Y3 403 aaKnown RBP22.72■■□□□ 1.23
CDKN1C-202ENST00000414822 TAB3Q8N5C8 712 aaPredicted RBP22.72■■□□□ 1.23
CDKN1C-202ENST00000414822 SH2D3CQ8N5H7 860 aa22.72■■□□□ 1.23
CDKN1C-202ENST00000414822 FAM76AQ8TAV0 307 aa22.72■■□□□ 1.23
CDKN1C-202ENST00000414822 TMBIM4Q9HC24 238 aa22.72■■□□□ 1.23
CDKN1C-202ENST00000414822 NRLP54845 237 aa22.71■■□□□ 1.23
CDKN1C-202ENST00000414822 EFHC2Q5JST6 749 aa22.71■■□□□ 1.23
CDKN1C-202ENST00000414822 ZCCHC9Q8N567 271 aaKnown RBP22.71■■□□□ 1.23
CDKN1C-202ENST00000414822 RRN3Q9NYV6 651 aa22.71■■□□□ 1.23
CDKN1C-202ENST00000414822 TTC3P53804 2025 aa22.71■■□□□ 1.23
CDKN1C-202ENST00000414822 TANC1Q9C0D5 1861 aa22.71■■□□□ 1.23
CDKN1C-202ENST00000414822 SF3B1O75533 1304 aaKnown RBP eCLIP22.7■■□□□ 1.23
CDKN1C-202ENST00000414822 UPP2O95045 317 aa22.7■■□□□ 1.23
CDKN1C-202ENST00000414822 ZFXP17010 805 aaPredicted RBP22.7■■□□□ 1.23
CDKN1C-202ENST00000414822 AMPD1P23109 780 aa22.7■■□□□ 1.23
CDKN1C-202ENST00000414822 STIP1P31948 543 aaKnown RBP22.7■■□□□ 1.23
CDKN1C-202ENST00000414822 GBE1Q04446 702 aa22.7■■□□□ 1.23
CDKN1C-202ENST00000414822 MORF4L2Q15014 288 aa22.7■■□□□ 1.23
CDKN1C-202ENST00000414822 NFE2Q16621 373 aaPredicted RBP22.7■■□□□ 1.23
CDKN1C-202ENST00000414822 KRT71Q3SY84 523 aa22.7■■□□□ 1.23
CDKN1C-202ENST00000414822 RNASEH2BQ5TBB1 312 aaKnown RBP22.7■■□□□ 1.23
CDKN1C-202ENST00000414822 SCML4Q8N228 414 aa22.7■■□□□ 1.23
CDKN1C-202ENST00000414822 ZNF333Q96JL9 665 aa22.7■■□□□ 1.23
CDKN1C-202ENST00000414822 ATP6V1G3Q96LB4 118 aa22.7■■□□□ 1.23
CDKN1C-202ENST00000414822 PGLYRP2Q96PD5 576 aa22.7■■□□□ 1.23
CDKN1C-202ENST00000414822 LRRC4CQ9HCJ2 640 aa22.7■■□□□ 1.23
CDKN1C-202ENST00000414822 WDR6Q9NNW5 1121 aaKnown RBP22.7■■□□□ 1.23
CDKN1C-202ENST00000414822 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.7■■□□□ 1.23
CDKN1C-202ENST00000414822 NLRC5Q86WI3 1866 aa22.7■■□□□ 1.22
CDKN1C-202ENST00000414822 CREB3O43889 395 aa22.7■■□□□ 1.22
CDKN1C-202ENST00000414822 ACSL3O95573 720 aa22.7■■□□□ 1.22
CDKN1C-202ENST00000414822 CTCFP49711 727 aaPredicted RBP22.7■■□□□ 1.22
CDKN1C-202ENST00000414822 ZNF280DQ6N043 979 aa22.7■■□□□ 1.22
CDKN1C-202ENST00000414822 FUT10Q6P4F1 479 aa22.7■■□□□ 1.22
CDKN1C-202ENST00000414822 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.7■■□□□ 1.22
CDKN1C-202ENST00000414822 RNF139Q8WU17 664 aa22.7■■□□□ 1.22
CDKN1C-202ENST00000414822 SLC9A7Q96T83 725 aa22.7■■□□□ 1.22
CDKN1C-202ENST00000414822 TNFRSF10BO14763 440 aa22.69■■□□□ 1.22
CDKN1C-202ENST00000414822 ADRA1BP35368 520 aa22.69■■□□□ 1.22
CDKN1C-202ENST00000414822 LRRN4Q8WUT4 740 aa22.69■■□□□ 1.22
CDKN1C-202ENST00000414822 PGAP3Q96FM1 320 aaPredicted RBP22.69■■□□□ 1.22
CDKN1C-202ENST00000414822 RBM15Q96T37 977 aaKnown RBP eCLIP22.69■■□□□ 1.221e-10■□□□□ 11.1
CDKN1C-202ENST00000414822 ETNK2Q9NVF9 386 aa22.69■■□□□ 1.22
CDKN1C-202ENST00000414822 RCOR3Q9P2K3 495 aaPredicted RBP22.69■■□□□ 1.22
CDKN1C-202ENST00000414822 MFHAS1Q9Y4C4 1052 aa22.69■■□□□ 1.22
CDKN1C-202ENST00000414822 H3BRJ5 948 aa22.69■■□□□ 1.22
CDKN1C-202ENST00000414822 NDC80O14777 642 aa22.69■■□□□ 1.22
CDKN1C-202ENST00000414822 KCNN4O15554 427 aa22.69■■□□□ 1.22
CDKN1C-202ENST00000414822 GALTP07902 379 aa22.69■■□□□ 1.22
CDKN1C-202ENST00000414822 ARPP19P56211 112 aa22.69■■□□□ 1.22
CDKN1C-202ENST00000414822 NCBP2-AS2Q69YL0 99 aa22.69■■□□□ 1.22
CDKN1C-202ENST00000414822 TMEM173Q86WV6 379 aaPredicted RBP22.69■■□□□ 1.22
CDKN1C-202ENST00000414822 LRRC43Q8N309 656 aa22.69■■□□□ 1.22
CDKN1C-202ENST00000414822 FUBP3Q96I24 572 aaKnown RBP eCLIP22.69■■□□□ 1.22
CDKN1C-202ENST00000414822 FOXP3Q9BZS1 431 aa22.69■■□□□ 1.22
CDKN1C-202ENST00000414822 TMEM39AQ9NV64 488 aa22.69■■□□□ 1.22
CDKN1C-202ENST00000414822 BCCIPQ9P287 314 aaKnown RBP eCLIP22.69■■□□□ 1.22
CDKN1C-202ENST00000414822 TBX21Q9UL17 535 aa22.69■■□□□ 1.22
CDKN1C-202ENST00000414822 SHOC2Q9UQ13 582 aa22.69■■□□□ 1.22
CDKN1C-202ENST00000414822 PTPRDP23468 1912 aa22.68■■□□□ 1.22
CDKN1C-202ENST00000414822 FGFR3P22607 806 aa22.68■■□□□ 1.22
CDKN1C-202ENST00000414822 RBL1P28749 1068 aa22.68■■□□□ 1.22
CDKN1C-202ENST00000414822 SLC10A2Q12908 348 aaPredicted RBP22.68■■□□□ 1.22
CDKN1C-202ENST00000414822 MRPL58Q14197 206 aaKnown RBP22.68■■□□□ 1.22
CDKN1C-202ENST00000414822 KYNUQ16719 465 aa22.68■■□□□ 1.22
CDKN1C-202ENST00000414822 DNAJC21Q5F1R6 531 aaKnown RBP22.68■■□□□ 1.22
CDKN1C-202ENST00000414822 FAM182AQ5T1J6 154 aa22.68■■□□□ 1.22
CDKN1C-202ENST00000414822 C1orf53Q5VUE5 145 aa22.68■■□□□ 1.22
CDKN1C-202ENST00000414822 SDHAF4Q5VUM1 108 aa22.68■■□□□ 1.22
CDKN1C-202ENST00000414822 PCGF5Q86SE9 256 aa22.68■■□□□ 1.22
CDKN1C-202ENST00000414822 TAC4Q86UU9 113 aa22.68■■□□□ 1.22
CDKN1C-202ENST00000414822 CCDC33Q8N5R6 958 aa22.68■■□□□ 1.22
CDKN1C-202ENST00000414822 STKLD1Q8NE28 680 aa22.68■■□□□ 1.22
CDKN1C-202ENST00000414822 PRCCQ92733 491 aaPredicted RBP22.68■■□□□ 1.22
CDKN1C-202ENST00000414822 EXOC4Q96A65 974 aa22.68■■□□□ 1.22
CDKN1C-202ENST00000414822 NTAN1Q96AB6 310 aa22.68■■□□□ 1.22
CDKN1C-202ENST00000414822 TMEM175Q9BSA9 504 aa22.68■■□□□ 1.22
CDKN1C-202ENST00000414822 USP29Q9HBJ7 922 aa22.68■■□□□ 1.22
CDKN1C-202ENST00000414822 ANLNQ9NQW6 1124 aa22.68■■□□□ 1.22
CDKN1C-202ENST00000414822 ARHGEF4Q9NR80 690 aa22.68■■□□□ 1.22
CDKN1C-202ENST00000414822 FBXW11Q9UKB1 542 aa22.68■■□□□ 1.22
CDKN1C-202ENST00000414822 PCDHB5Q9Y5E4 795 aa22.68■■□□□ 1.22
CDKN1C-202ENST00000414822 HMGB1P1B2RPK0 211 aaPredicted RBP22.67■■□□□ 1.22
CDKN1C-202ENST00000414822 F9P00740 461 aa22.67■■□□□ 1.22
CDKN1C-202ENST00000414822 GPR15P49685 360 aa22.67■■□□□ 1.22
CDKN1C-202ENST00000414822 AIF1P55008 147 aa22.67■■□□□ 1.22
CDKN1C-202ENST00000414822 YWHAGP61981 247 aaKnown RBP eCLIP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms