RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 TRIM62Q9BVG3 475 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 TSGA10Q9BZW7 698 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 RNF38Q9H0F5 515 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 SMOC2Q9H3U7 446 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 PRDM6Q9NQX0 595 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 SMPD4Q9NXE4 827 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 USTQ9Y2C2 406 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 HYOU1Q9Y4L1 999 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 CAPN6Q9Y6Q1 641 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.68□□□□□ -0.22
CNOT4-204ENST00000414802 M0QYT0 321 aa13.68□□□□□ -0.22
CNOT4-204ENST00000414802 ZNF197O14709 1029 aa13.68□□□□□ -0.22
CNOT4-204ENST00000414802 BUB1BO60566 1050 aaPredicted RBP13.68□□□□□ -0.22
CNOT4-204ENST00000414802 TRUB2O95900 331 aaKnown RBP13.68□□□□□ -0.22
CNOT4-204ENST00000414802 CKMP06732 381 aa13.68□□□□□ -0.22
CNOT4-204ENST00000414802 IRF1P10914 325 aa13.68□□□□□ -0.22
CNOT4-204ENST00000414802 MTHFRP42898 656 aa13.68□□□□□ -0.22
CNOT4-204ENST00000414802 ZNF143P52747 638 aaPredicted RBP13.68□□□□□ -0.22
CNOT4-204ENST00000414802 NME3Q13232 169 aa13.68□□□□□ -0.22
CNOT4-204ENST00000414802 ARCQ7LC44 396 aa13.68□□□□□ -0.22
CNOT4-204ENST00000414802 NPAS3Q8IXF0 933 aa13.68□□□□□ -0.22
CNOT4-204ENST00000414802 ST13P5Q8NFI4 369 aaPredicted RBP13.68□□□□□ -0.22
CNOT4-204ENST00000414802 KIAA1524Q8TCG1 905 aa13.68□□□□□ -0.22
CNOT4-204ENST00000414802 RIPOR3Q96MK2 946 aa13.68□□□□□ -0.22
CNOT4-204ENST00000414802 ZSWIM3Q96MP5 696 aa13.68□□□□□ -0.22
CNOT4-204ENST00000414802 NPY6RQ99463 290 aa13.68□□□□□ -0.22
CNOT4-204ENST00000414802 CNPY3Q9BT09 278 aa13.68□□□□□ -0.22
CNOT4-204ENST00000414802 SLC46A2Q9BY10 475 aa13.68□□□□□ -0.22
CNOT4-204ENST00000414802 IRX2Q9BZI1 471 aaPredicted RBP13.68□□□□□ -0.22
CNOT4-204ENST00000414802 OLA1Q9NTK5 396 aaKnown RBP13.68□□□□□ -0.22
CNOT4-204ENST00000414802 DDIT4Q9NX09 232 aa13.68□□□□□ -0.22
CNOT4-204ENST00000414802 MARCH2Q9P0N8 246 aa13.68□□□□□ -0.22
CNOT4-204ENST00000414802 STAP1Q9ULZ2 295 aa13.68□□□□□ -0.22
CNOT4-204ENST00000414802 TRAV19A0A0A6YYK7 116 aa13.67□□□□□ -0.22
CNOT4-204ENST00000414802 SLC12A8A0AV02 714 aa13.67□□□□□ -0.22
CNOT4-204ENST00000414802 GRID2IPA4D2P6 1211 aa13.67□□□□□ -0.22
CNOT4-204ENST00000414802 MYO1FO00160 1098 aa13.67□□□□□ -0.22
CNOT4-204ENST00000414802 IRAK2O43187 625 aa13.67□□□□□ -0.22
CNOT4-204ENST00000414802 PROSCO94903 275 aa13.67□□□□□ -0.22
CNOT4-204ENST00000414802 PRAMEF12O95522 483 aa13.67□□□□□ -0.22
CNOT4-204ENST00000414802 TCF4P15884 667 aa13.67□□□□□ -0.22
CNOT4-204ENST00000414802 ATP5C1P36542 298 aaKnown RBP13.67□□□□□ -0.22
CNOT4-204ENST00000414802 PTPN9P43378 593 aa13.67□□□□□ -0.22
CNOT4-204ENST00000414802 TUBP50607 506 aa13.67□□□□□ -0.22
CNOT4-204ENST00000414802 TCEAL1Q15170 157 aa13.67□□□□□ -0.22
CNOT4-204ENST00000414802 SLC25A52Q3SY17 297 aa13.67□□□□□ -0.22
CNOT4-204ENST00000414802 BEND5Q7L4P6 421 aa13.67□□□□□ -0.22
CNOT4-204ENST00000414802 HLA-CQ95604 372 aa13.67□□□□□ -0.22
CNOT4-204ENST00000414802 TASP1Q9H6P5 420 aa13.67□□□□□ -0.22
CNOT4-204ENST00000414802 PIGVQ9NUD9 493 aa13.67□□□□□ -0.22
CNOT4-204ENST00000414802 IP6K2Q9UHH9 426 aa13.67□□□□□ -0.22
CNOT4-204ENST00000414802 CPQQ9Y646 472 aa13.67□□□□□ -0.22
CNOT4-204ENST00000414802 SCAMP3O14828 347 aaKnown RBP13.66□□□□□ -0.22
CNOT4-204ENST00000414802 OLFM2O95897 454 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 IGLV3-25P01717 112 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 HDCP19113 662 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 GJC1P36383 396 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 HADHBP55084 474 aaKnown RBP13.66□□□□□ -0.22
CNOT4-204ENST00000414802 HDAC4P56524 1084 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 DEUP1Q05D60 604 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 SMAD4Q13485 552 aaKnown RBP13.66□□□□□ -0.22
CNOT4-204ENST00000414802 ZNF662Q6ZS27 426 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 TADA2BQ86TJ2 420 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 FAM131BQ86XD5 332 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 ARFGAP1Q8N6T3 406 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 FNIP1Q8TF40 1166 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 SUSD6Q92537 303 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 FGF13Q92913 245 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 NT5C3BQ969T7 300 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 WBP2Q969T9 261 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 ZFRQ96KR1 1074 aaKnown RBP13.66□□□□□ -0.22
CNOT4-204ENST00000414802 MYADMQ96S97 322 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 CDK5RAP1Q96SZ6 601 aaKnown RBP13.66□□□□□ -0.22
CNOT4-204ENST00000414802 GKN1Q9NS71 199 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 DNMT3LQ9UJW3 386 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 CCL26Q9Y258 94 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 UNC80Q8N2C7 3258 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 TICRRQ7Z2Z1 1910 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 MBTPS2O43462 519 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 LRCH4O75427 683 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 PALMO75781 387 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 DDX6P26196 483 aaKnown RBP eCLIP13.66□□□□□ -0.22
CNOT4-204ENST00000414802 GBP2P32456 591 aaPredicted RBP13.66□□□□□ -0.22
CNOT4-204ENST00000414802 RDXP35241 583 aaKnown RBP13.66□□□□□ -0.22
CNOT4-204ENST00000414802 SSR1P43307 286 aaKnown RBP13.66□□□□□ -0.22
CNOT4-204ENST00000414802 KCNQ1P51787 676 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 TBX4P57082 545 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 ZXDBP98169 803 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 TFF2Q03403 129 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 DAAM2Q86T65 1068 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 CMTM8Q8IZV2 173 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 ZSCAN18Q8TBC5 510 aaPredicted RBP13.66□□□□□ -0.22
CNOT4-204ENST00000414802 SERPINB11Q96P15 392 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 PEBP4Q96S96 227 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 TMPRSS4Q9NRS4 437 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 RRN3Q9NYV6 651 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.66□□□□□ -0.22
CNOT4-204ENST00000414802 PCSK1NQ9UHG2 260 aa13.66□□□□□ -0.22
CNOT4-204ENST00000414802 NUP205Q92621 2012 aa13.65□□□□□ -0.22
CNOT4-204ENST00000414802 FTCDO95954 541 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms