RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 UBA3Q8TBC4 463 aa16.31■□□□□ 0.2
ACTB-202ENST00000414620 PIGKQ92643 395 aa16.31■□□□□ 0.2
ACTB-202ENST00000414620 CLIC5Q9NZA1 410 aa16.31■□□□□ 0.2
ACTB-202ENST00000414620 CTNND2Q9UQB3 1225 aa16.31■□□□□ 0.2
ACTB-202ENST00000414620 XPO1O14980 1071 aaKnown RBP16.3■□□□□ 0.2
ACTB-202ENST00000414620 NTSR1P30989 418 aa16.3■□□□□ 0.2
ACTB-202ENST00000414620 FMO5P49326 533 aa16.3■□□□□ 0.2
ACTB-202ENST00000414620 BCAT1P54687 386 aa16.3■□□□□ 0.2
ACTB-202ENST00000414620 SLC8A3P57103 927 aa16.3■□□□□ 0.2
ACTB-202ENST00000414620 YWHAEP62258 255 aaKnown RBP16.3■□□□□ 0.2
ACTB-202ENST00000414620 ADIGQ0VDE8 80 aa16.3■□□□□ 0.2
ACTB-202ENST00000414620 MAP7D1Q3KQU3 841 aa16.3■□□□□ 0.2
ACTB-202ENST00000414620 KIAA1211LQ6NV74 962 aa16.3■□□□□ 0.2
ACTB-202ENST00000414620 LPCAT2Q7L5N7 544 aa16.3■□□□□ 0.2
ACTB-202ENST00000414620 DENND1CQ8IV53 801 aa16.3■□□□□ 0.2
ACTB-202ENST00000414620 ARHGAP18Q8N392 663 aa16.3■□□□□ 0.2
ACTB-202ENST00000414620 DEFB119Q8N690 84 aa16.3■□□□□ 0.2
ACTB-202ENST00000414620 CNTNAP3BQ96NU0 1288 aa16.3■□□□□ 0.2
ACTB-202ENST00000414620 CDK5RAP1Q96SZ6 601 aaKnown RBP16.3■□□□□ 0.2
ACTB-202ENST00000414620 CNTNAP3Q9BZ76 1288 aa16.3■□□□□ 0.2
ACTB-202ENST00000414620 LRRC4Q9HBW1 653 aa16.3■□□□□ 0.2
ACTB-202ENST00000414620 CACNA2D2Q9NY47 1150 aa16.3■□□□□ 0.2
ACTB-202ENST00000414620 MARCH2Q9P0N8 246 aa16.3■□□□□ 0.2
ACTB-202ENST00000414620 CALCOCO1Q9P1Z2 691 aa16.3■□□□□ 0.2
ACTB-202ENST00000414620 HESX1Q9UBX0 185 aa16.3■□□□□ 0.2
ACTB-202ENST00000414620 CKAP5Q14008 2032 aa16.29■□□□□ 0.2
ACTB-202ENST00000414620 LNP1A1A4G5 178 aa16.29■□□□□ 0.2
ACTB-202ENST00000414620 PIK3R2O00459 728 aa16.29■□□□□ 0.2
ACTB-202ENST00000414620 BIN1O00499 593 aa16.29■□□□□ 0.2
ACTB-202ENST00000414620 KHNYNO15037 678 aaKnown RBP16.29■□□□□ 0.2
ACTB-202ENST00000414620 GADD45BO75293 160 aaPredicted RBP16.29■□□□□ 0.2
ACTB-202ENST00000414620 ZBED1O96006 694 aa16.29■□□□□ 0.2
ACTB-202ENST00000414620 CALCAP01258 141 aa16.29■□□□□ 0.2
ACTB-202ENST00000414620 CISD3P0C7P0 127 aa16.29■□□□□ 0.2
ACTB-202ENST00000414620 PTGER3P43115 390 aa16.29■□□□□ 0.2
ACTB-202ENST00000414620 STX17P56962 302 aa16.29■□□□□ 0.2
ACTB-202ENST00000414620 COG7P83436 770 aa16.29■□□□□ 0.2
ACTB-202ENST00000414620 BST2Q10589 180 aaKnown RBP16.29■□□□□ 0.2
ACTB-202ENST00000414620 BHLHA9Q7RTU4 235 aa16.29■□□□□ 0.2
ACTB-202ENST00000414620 ZNF276Q8N554 614 aa16.29■□□□□ 0.2
ACTB-202ENST00000414620 UBR7Q8N806 425 aa16.29■□□□□ 0.2
ACTB-202ENST00000414620 KCNV2Q8TDN2 545 aa16.29■□□□□ 0.2
ACTB-202ENST00000414620 IPO4Q8TEX9 1081 aaKnown RBP16.29■□□□□ 0.2
ACTB-202ENST00000414620 NELFBQ8WX92 580 aa16.29■□□□□ 0.2
ACTB-202ENST00000414620 KAT5Q92993 513 aa16.29■□□□□ 0.2
ACTB-202ENST00000414620 DHTKD1Q96HY7 919 aaPredicted RBP16.29■□□□□ 0.2
ACTB-202ENST00000414620 UBXN6Q9BZV1 441 aa16.29■□□□□ 0.2
ACTB-202ENST00000414620 SLC6A17Q9H1V8 727 aa16.29■□□□□ 0.2
ACTB-202ENST00000414620 METTL14Q9HCE5 456 aaKnown RBP16.29■□□□□ 0.2
ACTB-202ENST00000414620 AGO1Q9UL18 857 aaKnown RBP16.29■□□□□ 0.2
ACTB-202ENST00000414620 STRIP2Q9ULQ0 834 aa16.29■□□□□ 0.2
ACTB-202ENST00000414620 STARD13Q9Y3M8 1113 aa16.29■□□□□ 0.2
ACTB-202ENST00000414620 PCDHB4Q9Y5E5 795 aa16.29■□□□□ 0.2
ACTB-202ENST00000414620 A0A1W2PQF6 199 aa16.28■□□□□ 0.2
ACTB-202ENST00000414620 C4orf47A7E2U8 309 aa16.28■□□□□ 0.2
ACTB-202ENST00000414620 WASH3PC4AMC7 463 aa16.28■□□□□ 0.2
ACTB-202ENST00000414620 TM4SF5O14894 197 aa16.28■□□□□ 0.2
ACTB-202ENST00000414620 VDRP11473 427 aa16.28■□□□□ 0.2
ACTB-202ENST00000414620 LCP1P13796 627 aa16.28■□□□□ 0.2
ACTB-202ENST00000414620 NDUFV2P19404 249 aa16.28■□□□□ 0.2
ACTB-202ENST00000414620 TBXAS1P24557 533 aaPredicted RBP16.28■□□□□ 0.2
ACTB-202ENST00000414620 RGS7P49802 495 aa16.28■□□□□ 0.2
ACTB-202ENST00000414620 FYB2Q5VWT5 728 aa16.28■□□□□ 0.2
ACTB-202ENST00000414620 SDE2Q6IQ49 451 aa16.28■□□□□ 0.2
ACTB-202ENST00000414620 TMEM270Q6UE05 265 aa16.28■□□□□ 0.2
ACTB-202ENST00000414620 PPM1KQ8N3J5 372 aa16.28■□□□□ 0.2
ACTB-202ENST00000414620 DDX1Q92499 740 aaKnown RBP16.28■□□□□ 0.2
ACTB-202ENST00000414620 EDEM1Q92611 657 aa16.28■□□□□ 0.2
ACTB-202ENST00000414620 CEP63Q96MT8 703 aa16.28■□□□□ 0.2
ACTB-202ENST00000414620 NT5C1BQ96P26 610 aa16.28■□□□□ 0.2
ACTB-202ENST00000414620 FAM124BQ9H5Z6 455 aaPredicted RBP16.28■□□□□ 0.2
ACTB-202ENST00000414620 CD93Q9NPY3 652 aa16.28■□□□□ 0.2
ACTB-202ENST00000414620 SFMBT1Q9UHJ3 866 aa16.28■□□□□ 0.2
ACTB-202ENST00000414620 ZNF510Q9Y2H8 683 aa16.28■□□□□ 0.2
ACTB-202ENST00000414620 O00370 1275 aa16.27■□□□□ 0.2
ACTB-202ENST00000414620 BMP6P22004 513 aa16.27■□□□□ 0.2
ACTB-202ENST00000414620 BRD2P25440 801 aaKnown RBP16.27■□□□□ 0.2
ACTB-202ENST00000414620 MFAP3P55082 362 aa16.27■□□□□ 0.2
ACTB-202ENST00000414620 IRX4P78413 519 aa16.27■□□□□ 0.2
ACTB-202ENST00000414620 RPL6Q02878 288 aaKnown RBP16.27■□□□□ 0.2
ACTB-202ENST00000414620 BYSLQ13895 437 aaKnown RBP16.27■□□□□ 0.2
ACTB-202ENST00000414620 GEN1Q17RS7 908 aa16.27■□□□□ 0.2
ACTB-202ENST00000414620 LYSMD4Q5XG99 296 aa16.27■□□□□ 0.2
ACTB-202ENST00000414620 PM20D1Q6GTS8 502 aa16.27■□□□□ 0.2
ACTB-202ENST00000414620 TTI2Q6NXR4 508 aa16.27■□□□□ 0.2
ACTB-202ENST00000414620 FMNL3Q8IVF7 1028 aa16.27■□□□□ 0.2
ACTB-202ENST00000414620 SIX6OS1Q8N1H7 587 aa16.27■□□□□ 0.2
ACTB-202ENST00000414620 TFAP2BQ92481 460 aa16.27■□□□□ 0.2
ACTB-202ENST00000414620 IPO9Q96P70 1041 aaKnown RBP16.27■□□□□ 0.2
ACTB-202ENST00000414620 GABRG3Q99928 467 aa16.27■□□□□ 0.2
ACTB-202ENST00000414620 GTPBP4Q9BZE4 634 aaKnown RBP16.27■□□□□ 0.2
ACTB-202ENST00000414620 DCLK3Q9C098 648 aa16.27■□□□□ 0.2
ACTB-202ENST00000414620 TMEM74BQ9NUR3 256 aa16.27■□□□□ 0.2
ACTB-202ENST00000414620 CLEC4EQ9ULY5 219 aa16.27■□□□□ 0.2
ACTB-202ENST00000414620 CYP8B1Q9UNU6 501 aa16.27■□□□□ 0.2
ACTB-202ENST00000414620 MUC22E2RYF6 1773 aaPredicted RBP16.27■□□□□ 0.2
ACTB-202ENST00000414620 NCOR2Q9Y618 2525 aa16.27■□□□□ 0.2
ACTB-202ENST00000414620 GON4LQ3T8J9 2241 aa16.27■□□□□ 0.19
ACTB-202ENST00000414620 YJEFN3A6XGL0 299 aa16.26■□□□□ 0.19
ACTB-202ENST00000414620 PPP1R3GB7ZBB8 358 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms