RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 CLDN3O15551 220 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 RRP8O43159 456 aaKnown RBP10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 KIF5CO60282 957 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 CPB1P15086 417 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 SOX5P35711 763 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 AP3M2P53677 418 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 EPHB3P54753 998 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 KLHL30Q0D2K2 578 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 RAPGEF1Q13905 1077 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 MRPL58Q14197 206 aaKnown RBP10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 SPA17Q15506 151 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 CRY1Q16526 586 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 SLC18A3Q16572 532 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 MAP7D1Q3KQU3 841 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 ARHGAP15Q53QZ3 475 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 CCDC157Q569K6 752 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 C10orf76Q5T2E6 689 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 SV2AQ7L0J3 742 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 BRSK2Q8IWQ3 736 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 TXLNBQ8N3L3 684 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 FBXL13Q8NEE6 735 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 USP33Q8TEY7 942 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 ZBTB45Q96K62 511 aaPredicted RBP10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 FAM81BQ96LP2 452 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 PGLYRP2Q96PD5 576 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 SYT11Q9BT88 431 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 MSTO1Q9BUK6 570 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 TSGA10Q9BZW7 698 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 TRIM4Q9C037 500 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 CRISPLD1Q9H336 500 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 TASP1Q9H6P5 420 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 PRMT7Q9NVM4 692 aaPredicted RBP10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 NXF1Q9UBU9 619 aaKnown RBP10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 DNAJC12Q9UKB3 198 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 CCL26Q9Y258 94 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 TNFSF13BQ9Y275 285 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 PCDHA13Q9Y5I0 950 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 MYO9AB2RTY4 2548 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 MYO16Q9Y6X6 1858 aa10.08□□□□□ -0.8
SOX9-AS1-201ENST00000412640 KIAA1549LQ6ZVL6 1849 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 PTPRQQ9UMZ3 2332 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 A0A0U1RQJ8 604 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 TTLL13PA6NNM8 815 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 ERVH48-1M5A8F1 160 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 KRT86O43790 486 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 AKR1B10O60218 316 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 ALDH1A2O94788 518 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 VNN2O95498 520 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 C4BPAP04003 597 aaKnown RBP10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 CCDC172P0C7W6 258 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 C6P13671 934 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 HLA-EP13747 358 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 GNG11P61952 73 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 RPL6Q02878 288 aaKnown RBP10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 DUSP4Q13115 394 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 PRPF4BQ13523 1007 aaKnown RBP10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 DRAP1Q14919 205 aaPredicted RBP10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 SURF1Q15526 300 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 PLEKHG6Q3KR16 790 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 ZACNQ401N2 412 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 TDRD12Q587J7 1177 aaKnown RBP10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 SPDYCQ5MJ68 293 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 LMBRD2Q68DH5 695 aaPredicted RBP10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 GJB7Q6PEY0 223 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 MPZL3Q6UWV2 235 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 DNAJB7Q7Z6W7 309 aaPredicted RBP10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 RIN3Q8TB24 985 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 WHAMMQ8TF30 809 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 ZNF516Q92618 1163 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 SEMA4DQ92854 862 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 JAKMIP2Q96AA8 810 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 CCDC127Q96BQ5 260 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 PPP1R10Q96QC0 940 aaKnown RBP10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 WDR24Q96S15 920 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 CGRRF1Q99675 332 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 SLC46A2Q9BY10 475 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 DEF6Q9H4E7 631 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 LUC7LQ9NQ29 371 aaKnown RBP10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 RAB20Q9NX57 234 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 KCNK4Q9NYG8 393 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 RBAKQ9NYW8 714 aaPredicted RBP10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 BCCIPQ9P287 314 aaKnown RBP eCLIP10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 IL17BQ9UHF5 180 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 DNAI1Q9UI46 699 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 MMP17Q9ULZ9 603 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 SLC27A5Q9Y2P5 690 aa10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 HELZP42694 1942 aaKnown RBP10.07□□□□□ -0.8
SOX9-AS1-201ENST00000412640 GOLGA4Q13439 2230 aaKnown RBP10.06□□□□□ -0.8
SOX9-AS1-201ENST00000412640 RCCD1A6NED2 376 aa10.06□□□□□ -0.8
SOX9-AS1-201ENST00000412640 BTNL10A8MVZ5 291 aa10.06□□□□□ -0.8
SOX9-AS1-201ENST00000412640 RIOK3O14730 519 aaKnown RBP10.06□□□□□ -0.8
SOX9-AS1-201ENST00000412640 SOAT2O75908 522 aa10.06□□□□□ -0.8
SOX9-AS1-201ENST00000412640 DKK1O94907 266 aa10.06□□□□□ -0.8
SOX9-AS1-201ENST00000412640 ABL1P00519 1130 aa10.06□□□□□ -0.8
SOX9-AS1-201ENST00000412640 OR4Q2P0C623 313 aa10.06□□□□□ -0.8
SOX9-AS1-201ENST00000412640 CASQ1P31415 396 aa10.06□□□□□ -0.8
SOX9-AS1-201ENST00000412640 IL12RB1P42701 662 aa10.06□□□□□ -0.8
SOX9-AS1-201ENST00000412640 ALDH1A3P47895 512 aa10.06□□□□□ -0.8
SOX9-AS1-201ENST00000412640 ACOT2P49753 483 aa10.06□□□□□ -0.8
SOX9-AS1-201ENST00000412640 GCNT1Q02742 428 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms