RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 CENPCQ03188 943 aa13.75□□□□□ -0.21
HDAC8-210ENST00000412342 GOLGA8FQ08AF8 430 aa13.75□□□□□ -0.21
HDAC8-210ENST00000412342 GOLGA8DPQ0D2H9 430 aa13.75□□□□□ -0.21
HDAC8-210ENST00000412342 C2CD6Q53TS8 623 aa13.75□□□□□ -0.21
HDAC8-210ENST00000412342 C1orf228Q6PIY5 440 aa13.75□□□□□ -0.21
HDAC8-210ENST00000412342 TAC4Q86UU9 113 aa13.75□□□□□ -0.21
HDAC8-210ENST00000412342 XYLT1Q86Y38 959 aa13.75□□□□□ -0.21
HDAC8-210ENST00000412342 ZDHHC17Q8IUH5 632 aa13.75□□□□□ -0.21
HDAC8-210ENST00000412342 FAM217AQ8IXS0 508 aa13.75□□□□□ -0.21
HDAC8-210ENST00000412342 IPO4Q8TEX9 1081 aaKnown RBP13.75□□□□□ -0.21
HDAC8-210ENST00000412342 RNF139Q8WU17 664 aa13.75□□□□□ -0.21
HDAC8-210ENST00000412342 CPA5Q8WXQ8 436 aa13.75□□□□□ -0.21
HDAC8-210ENST00000412342 CLDN23Q96B33 292 aa13.75□□□□□ -0.21
HDAC8-210ENST00000412342 FAM149B1Q96BN6 582 aa13.75□□□□□ -0.21
HDAC8-210ENST00000412342 PLD4Q96BZ4 506 aa13.75□□□□□ -0.21
HDAC8-210ENST00000412342 SLC39A13Q96H72 371 aa13.75□□□□□ -0.21
HDAC8-210ENST00000412342 AGPAT1Q99943 283 aa13.75□□□□□ -0.21
HDAC8-210ENST00000412342 NUP58Q9BVL2 599 aa13.75□□□□□ -0.21
HDAC8-210ENST00000412342 PDCL3Q9H2J4 239 aa13.75□□□□□ -0.21
HDAC8-210ENST00000412342 POPDC2Q9HBU9 364 aa13.75□□□□□ -0.21
HDAC8-210ENST00000412342 STRIP2Q9ULQ0 834 aa13.75□□□□□ -0.21
HDAC8-210ENST00000412342 FAM170BA6NMN3 283 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 GFRA2O00451 464 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 TRDMT1O14717 391 aaKnown RBP13.74□□□□□ -0.21
HDAC8-210ENST00000412342 HSF2BPO75031 334 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 DAB1O75553 588 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 DCNP07585 359 aaKnown RBP13.74□□□□□ -0.21
HDAC8-210ENST00000412342 HMBSP08397 361 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 CHRNB1P11230 501 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 CORO1AP31146 461 aaKnown RBP13.74□□□□□ -0.21
HDAC8-210ENST00000412342 SCNN1AP37088 669 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 OPRD1P41143 372 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 NNTQ13423 1086 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 CCINQ13939 588 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 UBXN2BQ14CS0 331 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 CLEC16AQ2KHT3 1053 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 TMEM196Q5HYL7 178 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 EFHC1Q5JVL4 640 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 LY6G5CQ5SRR4 150 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 OTUD1Q5VV17 481 aaPredicted RBP13.74□□□□□ -0.21
HDAC8-210ENST00000412342 HGSNATQ68CP4 663 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 OR6B2Q6IFH4 312 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 SARM1Q6SZW1 724 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 TOGARAM2Q6ZUX3 1019 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 C12orf40Q86WS4 652 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 ERICH1Q86X53 443 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 DEFB106AQ8N104 65 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 EZH1Q92800 747 aaPredicted RBP13.74□□□□□ -0.21
HDAC8-210ENST00000412342 GOLGA1Q92805 767 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 C18orf8Q96DM3 657 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 FCRL2Q96LA5 508 aaPredicted RBP13.74□□□□□ -0.21
HDAC8-210ENST00000412342 NELL2Q99435 816 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 TRIM62Q9BVG3 475 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 ADAM33Q9BZ11 813 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 RBSNQ9H1K0 784 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 FBRSL1Q9HCM7 1045 aaKnown RBP13.74□□□□□ -0.21
HDAC8-210ENST00000412342 MARK1Q9P0L2 795 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 STOML2Q9UJZ1 356 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 LSM7Q9UK45 103 aaKnown RBP13.74□□□□□ -0.21
HDAC8-210ENST00000412342 AGO1Q9UL18 857 aaKnown RBP13.74□□□□□ -0.21
HDAC8-210ENST00000412342 CAPN11Q9UMQ6 739 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 NDRG2Q9UN36 371 aaKnown RBP13.74□□□□□ -0.21
HDAC8-210ENST00000412342 MRPS17Q9Y2R5 130 aaKnown RBP13.74□□□□□ -0.21
HDAC8-210ENST00000412342 SIT1Q9Y3P8 196 aa13.74□□□□□ -0.21
HDAC8-210ENST00000412342 IRAK2O43187 625 aa13.73□□□□□ -0.21
HDAC8-210ENST00000412342 HOXC11O43248 304 aaPredicted RBP13.73□□□□□ -0.21
HDAC8-210ENST00000412342 GRAP2O75791 330 aa13.73□□□□□ -0.21
HDAC8-210ENST00000412342 ADH5P11766 374 aa13.73□□□□□ -0.21
HDAC8-210ENST00000412342 RPS9P46781 194 aaKnown RBP13.73□□□□□ -0.21
HDAC8-210ENST00000412342 GSCP56915 257 aaPredicted RBP13.73□□□□□ -0.21
HDAC8-210ENST00000412342 SNX16P57768 344 aa13.73□□□□□ -0.21
HDAC8-210ENST00000412342 RING1Q06587 406 aa13.73□□□□□ -0.21
HDAC8-210ENST00000412342 PON2Q15165 354 aa13.73□□□□□ -0.21
HDAC8-210ENST00000412342 ASIC2Q16515 512 aa13.73□□□□□ -0.21
HDAC8-210ENST00000412342 SFMBT2Q5VUG0 894 aa13.73□□□□□ -0.21
HDAC8-210ENST00000412342 FSTL4Q6MZW2 842 aa13.73□□□□□ -0.21
HDAC8-210ENST00000412342 TRNP1Q6NT89 227 aa13.73□□□□□ -0.21
HDAC8-210ENST00000412342 MMS22LQ6ZRQ5 1243 aa13.73□□□□□ -0.21
HDAC8-210ENST00000412342 ZNF571Q7Z3V5 609 aaPredicted RBP13.73□□□□□ -0.21
HDAC8-210ENST00000412342 TMEM25Q86YD3 366 aa13.73□□□□□ -0.21
HDAC8-210ENST00000412342 PHF13Q86YI8 300 aaPredicted RBP13.73□□□□□ -0.21
HDAC8-210ENST00000412342 VSTM4Q8IW00 320 aa13.73□□□□□ -0.21
HDAC8-210ENST00000412342 ETFBKMTQ8IXQ9 262 aa13.73□□□□□ -0.21
HDAC8-210ENST00000412342 PHTF2Q8N3S3 785 aa13.73□□□□□ -0.21
HDAC8-210ENST00000412342 SLC30A5Q8TAD4 765 aa13.73□□□□□ -0.21
HDAC8-210ENST00000412342 ADAM32Q8TC27 787 aa13.73□□□□□ -0.21
HDAC8-210ENST00000412342 IQCDQ96DY2 449 aa13.73□□□□□ -0.21
HDAC8-210ENST00000412342 SERPINB11Q96P15 392 aa13.73□□□□□ -0.21
HDAC8-210ENST00000412342 DCLK3Q9C098 648 aa13.73□□□□□ -0.21
HDAC8-210ENST00000412342 HAUS4Q9H6D7 363 aa13.73□□□□□ -0.21
HDAC8-210ENST00000412342 SYNCQ9H7C4 482 aa13.73□□□□□ -0.21
HDAC8-210ENST00000412342 SPHK2Q9NRA0 654 aa13.73□□□□□ -0.21
HDAC8-210ENST00000412342 TMEM59LQ9UK28 342 aa13.73□□□□□ -0.21
HDAC8-210ENST00000412342 ZNF510Q9Y2H8 683 aa13.73□□□□□ -0.21
HDAC8-210ENST00000412342 TCRBV5S1A1TA0A578 114 aa13.72□□□□□ -0.21
HDAC8-210ENST00000412342 STK25O00506 426 aa13.72□□□□□ -0.21
HDAC8-210ENST00000412342 CAPN9O14815 690 aa13.72□□□□□ -0.21
HDAC8-210ENST00000412342 CBFA2T2O43439 604 aa13.72□□□□□ -0.21
HDAC8-210ENST00000412342 LATS1O95835 1130 aa13.72□□□□□ -0.21
HDAC8-210ENST00000412342 TRUB2O95900 331 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms