RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 TJP3O95049 919 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 H2AFXP16104 143 aaPredicted RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 ABCB4P21439 1286 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 CALB2P22676 271 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 ADSSP30520 456 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 RPL9P32969 192 aaKnown RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 POLR2HP52434 150 aaKnown RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 POU5F1Q01860 360 aaKnown RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 TOP3AQ13472 1001 aaPredicted RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 ZNF234Q14588 700 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 SSX2Q16385 188 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 HSD17B12Q53GQ0 312 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 XKR3Q5GH77 459 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 EMBQ6PCB8 327 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 PNMA1Q8ND90 353 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 SPATA22Q8NHS9 363 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 SNX33Q8WV41 574 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 ZBTB9Q96C00 473 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 EYA3Q99504 573 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 COPS4Q9BT78 406 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 GANQ9H2C0 597 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 ZSWIM6Q9HCJ5 1215 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 MKLN1Q9UL63 735 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 CDYLQ9Y232 598 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 EIF3LQ9Y262 564 aaKnown RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 F8VZ95 297 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 H7C2Y5 167 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 NOS1APO75052 506 aaPredicted RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 MAKP20794 623 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 HTR2AP28223 471 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 SLC26A3P40879 764 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 C21orf59P57076 290 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 SNX17Q15036 470 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 NLRP8Q86W28 1048 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 NIM1KQ8IY84 436 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 INO80EQ8NBZ0 244 aaPredicted RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 POP5Q969H6 163 aaKnown RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 RADILQ96JH8 1075 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 MARK4Q96L34 752 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 TIMM29Q9BSF4 260 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 ATG5Q9H1Y0 275 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 FN3KQ9H479 309 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 GAREM1Q9H706 876 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 LAMP5Q9UJQ1 280 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 GINS2Q9Y248 185 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 TDRKHQ9Y2W6 561 aaKnown RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 CRYM-AS1A6NIL9 109 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 BOLA2-SMG1P6H3BVE0 249 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 RAD51CO43502 376 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 RAD51DO75771 328 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 CYBBP04839 570 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 PRLRP16471 622 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 MAPK4P31152 587 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 UGT1A5P35504 534 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 ETV5P41161 510 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 TMPOP42166 694 aaKnown RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 TWF2Q6IBS0 349 aaKnown RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 DENND5BQ6ZUT9 1274 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 ZNF767PQ75MW2 155 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 KRT28Q7Z3Y7 464 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 SNX32Q86XE0 403 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 SLC44A1Q8WWI5 657 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 RIT1Q92963 219 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 MOAP1Q96BY2 351 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 COG8Q96MW5 612 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 SGIP1Q9BQI5 828 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 HTATIP2Q9BUP3 242 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 PHF20Q9BVI0 1012 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 HIPK2Q9H2X6 1198 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 GMIPQ9P107 970 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 ZNF639Q9UID6 485 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 GNG8Q9UK08 70 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 MAN1B1Q9UKM7 699 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 CCDC163A0A0D9SF12 145 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 HEATR9A2RTY3 570 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 AGAP5A6NIR3 686 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 ARPC2O15144 300 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 CIDEAO60543 219 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 ALDH1A1P00352 501 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 PDYNP01213 254 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 IFNA17P01571 189 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 STAG3L2P0CL84 134 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 GAP43P17677 238 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 EIF2AK2P19525 551 aaKnown RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 CLCN6P51797 869 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 GEMIN4P57678 1058 aaKnown RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 CCNA1P78396 465 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 ALCAMQ13740 583 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 SULT1C3Q6IMI6 304 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 TOM1L2Q6ZVM7 507 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 COMTD1Q86VU5 262 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 TMEM17Q86X19 198 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 GHDCQ8N2G8 530 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 OR5T2Q8NGG2 359 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 OR4Q3Q8NH05 313 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 PIGOQ8TEQ8 1089 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 KLHL6Q8WZ60 621 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 MAGOHBQ96A72 148 aaKnown RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 RRNAD1Q96FB5 475 aaKnown RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 TESK2Q96S53 571 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms