RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 KLF8O95600 359 aaPredicted RBP19.94■□□□□ 0.78
SF3A1-202ENST00000411423 MFAP3P55082 362 aa19.94■□□□□ 0.78
SF3A1-202ENST00000411423 MRPS21P82921 87 aaKnown RBP19.94■□□□□ 0.78
SF3A1-202ENST00000411423 COG7P83436 770 aa19.94■□□□□ 0.78
SF3A1-202ENST00000411423 TRIP4Q15650 581 aaPredicted RBP19.94■□□□□ 0.78
SF3A1-202ENST00000411423 VWA3BQ502W6 1294 aa19.94■□□□□ 0.78
SF3A1-202ENST00000411423 FYB2Q5VWT5 728 aa19.94■□□□□ 0.78
SF3A1-202ENST00000411423 CAMKK1Q8N5S9 505 aa19.94■□□□□ 0.78
SF3A1-202ENST00000411423 TERB1Q8NA31 727 aa19.94■□□□□ 0.78
SF3A1-202ENST00000411423 TXNDC5Q8NBS9 432 aaKnown RBP19.94■□□□□ 0.78
SF3A1-202ENST00000411423 SHC3Q92529 594 aa19.94■□□□□ 0.78
SF3A1-202ENST00000411423 ACDQ96AP0 544 aa19.94■□□□□ 0.78
SF3A1-202ENST00000411423 HSFY1Q96LI6 401 aa19.94■□□□□ 0.78
SF3A1-202ENST00000411423 GBP4Q96PP9 640 aa19.94■□□□□ 0.78
SF3A1-202ENST00000411423 TUBGCP2Q9BSJ2 902 aa19.94■□□□□ 0.78
SF3A1-202ENST00000411423 DEC1Q9P2X7 70 aa19.94■□□□□ 0.78
SF3A1-202ENST00000411423 NCDNQ9UBB6 729 aa19.94■□□□□ 0.78
SF3A1-202ENST00000411423 CLEC4EQ9ULY5 219 aa19.94■□□□□ 0.78
SF3A1-202ENST00000411423 CCDC163A0A0D9SF12 145 aa19.93■□□□□ 0.78
SF3A1-202ENST00000411423 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.93■□□□□ 0.78
SF3A1-202ENST00000411423 KCNJ18B7U540 433 aa19.93■□□□□ 0.78
SF3A1-202ENST00000411423 PRRT4C9JH25 899 aa19.93■□□□□ 0.78
SF3A1-202ENST00000411423 GNA15P30679 374 aa19.93■□□□□ 0.78
SF3A1-202ENST00000411423 CNR2P34972 360 aa19.93■□□□□ 0.78
SF3A1-202ENST00000411423 TNFRSF4P43489 277 aa19.93■□□□□ 0.78
SF3A1-202ENST00000411423 KCNJ12Q14500 433 aa19.93■□□□□ 0.78
SF3A1-202ENST00000411423 CRY1Q16526 586 aa19.93■□□□□ 0.78
SF3A1-202ENST00000411423 C11orf57Q6ZUT1 292 aaPredicted RBP19.93■□□□□ 0.78
SF3A1-202ENST00000411423 ENOSF1Q7L5Y1 443 aa19.93■□□□□ 0.78
SF3A1-202ENST00000411423 FAM217AQ8IXS0 508 aa19.93■□□□□ 0.78
SF3A1-202ENST00000411423 WDTC1Q8N5D0 677 aa19.93■□□□□ 0.78
SF3A1-202ENST00000411423 FAM160A2Q8N612 972 aaPredicted RBP19.93■□□□□ 0.78
SF3A1-202ENST00000411423 GAB3Q8WWW8 586 aa19.93■□□□□ 0.78
SF3A1-202ENST00000411423 DACH1Q9UI36 760 aa19.93■□□□□ 0.78
SF3A1-202ENST00000411423 FBXO10Q9UK96 956 aa19.93■□□□□ 0.78
SF3A1-202ENST00000411423 STRIP2Q9ULQ0 834 aa19.93■□□□□ 0.78
SF3A1-202ENST00000411423 TBC1D3BA6NDS4 549 aa19.92■□□□□ 0.78
SF3A1-202ENST00000411423 DCLK1O15075 740 aa19.92■□□□□ 0.78
SF3A1-202ENST00000411423 AXIN1O15169 862 aa19.92■□□□□ 0.78
SF3A1-202ENST00000411423 THAP12O43422 761 aa19.92■□□□□ 0.78
SF3A1-202ENST00000411423 APBB3O95704 486 aa19.92■□□□□ 0.78
SF3A1-202ENST00000411423 PENKP01210 267 aaPredicted RBP19.92■□□□□ 0.78
SF3A1-202ENST00000411423 PRKCSHP14314 528 aaPredicted RBP19.92■□□□□ 0.78
SF3A1-202ENST00000411423 C10orf76Q5T2E6 689 aa19.92■□□□□ 0.78
SF3A1-202ENST00000411423 EGFLAMQ63HQ2 1017 aa19.92■□□□□ 0.78
SF3A1-202ENST00000411423 GRAMD4Q6IC98 578 aa19.92■□□□□ 0.78
SF3A1-202ENST00000411423 MSANTD2Q6P1R3 559 aa19.92■□□□□ 0.78
SF3A1-202ENST00000411423 KBTBD6Q86V97 674 aa19.92■□□□□ 0.78
SF3A1-202ENST00000411423 RASSF3Q86WH2 238 aa19.92■□□□□ 0.78
SF3A1-202ENST00000411423 SCUBE3Q8IX30 993 aa19.92■□□□□ 0.78
SF3A1-202ENST00000411423 IRGQQ8WZA9 623 aa19.92■□□□□ 0.78
SF3A1-202ENST00000411423 PLD4Q96BZ4 506 aa19.92■□□□□ 0.78
SF3A1-202ENST00000411423 PIWIL1Q96J94 861 aaKnown RBP19.92■□□□□ 0.78
SF3A1-202ENST00000411423 ACOX2Q99424 681 aa19.92■□□□□ 0.78
SF3A1-202ENST00000411423 SLC4A5Q9BY07 1137 aa19.92■□□□□ 0.78
SF3A1-202ENST00000411423 TPSD1Q9BZJ3 242 aa19.92■□□□□ 0.78
SF3A1-202ENST00000411423 ABCC13Q9NSE7 274 aa19.92■□□□□ 0.78
SF3A1-202ENST00000411423 WDR35Q9P2L0 1181 aa19.92■□□□□ 0.78
SF3A1-202ENST00000411423 DNAJC12Q9UKB3 198 aa19.92■□□□□ 0.78
SF3A1-202ENST00000411423 NFE2L3Q9Y4A8 694 aa19.92■□□□□ 0.78
SF3A1-202ENST00000411423 FOXN3O00409 490 aaPredicted RBP19.91■□□□□ 0.78
SF3A1-202ENST00000411423 GFRA2O00451 464 aa19.91■□□□□ 0.78
SF3A1-202ENST00000411423 PAPSS1O43252 624 aaPredicted RBP19.91■□□□□ 0.78
SF3A1-202ENST00000411423 RPP40O75818 363 aaKnown RBP19.91■□□□□ 0.78
SF3A1-202ENST00000411423 LTFP02788 710 aa19.91■□□□□ 0.78
SF3A1-202ENST00000411423 CLCN1P35523 988 aa19.91■□□□□ 0.78
SF3A1-202ENST00000411423 USP8P40818 1118 aa19.91■□□□□ 0.78
SF3A1-202ENST00000411423 TCP11X2Q5H9J9 407 aa19.91■□□□□ 0.78
SF3A1-202ENST00000411423 LAIR1Q6GTX8 287 aa19.91■□□□□ 0.78
SF3A1-202ENST00000411423 FAM114A1Q8IWE2 563 aa19.91■□□□□ 0.78
SF3A1-202ENST00000411423 MDGA1Q8NFP4 955 aa19.91■□□□□ 0.78
SF3A1-202ENST00000411423 ENOX1Q8TC92 643 aaKnown RBP19.91■□□□□ 0.78
SF3A1-202ENST00000411423 RNF139Q8WU17 664 aa19.91■□□□□ 0.78
SF3A1-202ENST00000411423 DCLK3Q9C098 648 aa19.91■□□□□ 0.78
SF3A1-202ENST00000411423 OLA1Q9NTK5 396 aaKnown RBP19.91■□□□□ 0.78
SF3A1-202ENST00000411423 TAB2Q9NYJ8 693 aa19.91■□□□□ 0.78
SF3A1-202ENST00000411423 EBF1Q9UH73 591 aa19.91■□□□□ 0.78
SF3A1-202ENST00000411423 INVSQ9Y283 1065 aa19.91■□□□□ 0.78
SF3A1-202ENST00000411423 E5RJQ4 531 aa19.9■□□□□ 0.78
SF3A1-202ENST00000411423 IGLV3-27P01718 113 aa19.9■□□□□ 0.78
SF3A1-202ENST00000411423 WASP42768 502 aa19.9■□□□□ 0.78
SF3A1-202ENST00000411423 DGKGP49619 791 aa19.9■□□□□ 0.78
SF3A1-202ENST00000411423 SGSHP51688 502 aa19.9■□□□□ 0.78
SF3A1-202ENST00000411423 DGKEP52429 567 aa19.9■□□□□ 0.78
SF3A1-202ENST00000411423 SPEM2Q0P670 501 aa19.9■□□□□ 0.78
SF3A1-202ENST00000411423 CDKAL1Q5VV42 579 aa19.9■□□□□ 0.78
SF3A1-202ENST00000411423 ANO7Q6IWH7 933 aa19.9■□□□□ 0.78
SF3A1-202ENST00000411423 CEP68Q76N32 757 aa19.9■□□□□ 0.78
SF3A1-202ENST00000411423 PASD1Q8IV76 773 aa19.9■□□□□ 0.78
SF3A1-202ENST00000411423 CPXM2Q8N436 756 aa19.9■□□□□ 0.78
SF3A1-202ENST00000411423 ZNF513Q8N8E2 541 aaPredicted RBP19.9■□□□□ 0.78
SF3A1-202ENST00000411423 TSTD1Q8NFU3 115 aa19.9■□□□□ 0.78
SF3A1-202ENST00000411423 XPO6Q96QU8 1125 aaKnown RBP19.9■□□□□ 0.78
SF3A1-202ENST00000411423 ST7Q9NRC1 585 aa19.9■□□□□ 0.78
SF3A1-202ENST00000411423 NAALADL1Q9UQQ1 740 aa19.9■□□□□ 0.78
SF3A1-202ENST00000411423 ZNF510Q9Y2H8 683 aa19.9■□□□□ 0.78
SF3A1-202ENST00000411423 STARD13Q9Y3M8 1113 aa19.9■□□□□ 0.78
SF3A1-202ENST00000411423 HBS1LQ9Y450 684 aaKnown RBP19.9■□□□□ 0.78
SF3A1-202ENST00000411423 FHOD1Q9Y613 1164 aa19.9■□□□□ 0.78
SF3A1-202ENST00000411423 TSPAN3O60637 253 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms