RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 MAPKAPK3Q16644 382 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 SLC5A9Q2M3M2 681 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 ERCC6LQ2NKX8 1250 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 TRIM71Q2Q1W2 868 aaKnown RBP3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 TMEM95Q3KNT9 176 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 PDCD4Q53EL6 469 aaKnown RBP3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 PLAG1Q6DJT9 500 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 RGS7BPQ6MZT1 257 aaPredicted RBP3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 TAF2Q6P1X5 1199 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 RASGRP3Q8IV61 690 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 CCDC117Q8IWD4 279 aaPredicted RBP3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 SRRM1Q8IYB3 904 aaKnown RBP3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 NRSN1Q8IZ57 195 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 ADGRG5Q8IZF4 528 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 LCORLQ8N3X6 602 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 RNF152Q8N8N0 203 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 CPEB3Q8NE35 698 aaKnown RBP3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 MYRIPQ8NFW9 859 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 OR56A3Q8NH54 315 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 FAM71BQ8TC56 605 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 MAML1Q92585 1016 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 RSC1A1Q92681 617 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 GCC1Q96CN9 775 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 SLC39A13Q96H72 371 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 FAM227BQ96M60 508 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 PRPF18Q99633 342 aaKnown RBP3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 VKORC1Q9BQB6 163 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 NUDT22Q9BRQ3 303 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 DPCDQ9BVM2 203 aaPredicted RBP3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 TLR10Q9BXR5 811 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 SLC25A32Q9H2D1 315 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 SAYSD1Q9NPB0 183 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 CASS4Q9NQ75 786 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 RGL1Q9NZL6 768 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 EHD3Q9NZN3 535 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 LRFN1Q9P244 771 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 NKX1-2Q9UD57 310 aaPredicted RBP3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 ANAPC4Q9UJX5 808 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 SLC45A2Q9UMX9 530 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 CHST2Q9Y4C5 530 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 MORC2Q9Y6X9 1032 aaPredicted RBP3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 HFM1A2PYH4 1435 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 DISP2A7MBM2 1401 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 ZFYVE9O95405 1425 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 ADGRL3Q9HAR2 1447 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 ARHGEF10O15013 1369 aa3□□□□□ -1.93
RNU6-1140P-201ENST00000410517 UTRNP46939 3433 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 FAM234BA2RU67 622 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 LEFTY2O00292 366 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 CD3EAPO15446 510 aaKnown RBP2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 PEX1O43933 1283 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 SUN1O94901 812 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 A1BGP04217 495 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 CBSLP0DN79 551 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 SRGNP10124 158 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 CHRM3P20309 590 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 RBL1P28749 1068 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 CBSP35520 551 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 CHKAP35790 457 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 PGDP52209 483 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 BCAT1P54687 386 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 HTRA4P83105 476 aaPredicted RBP2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 MYO1EQ12965 1108 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 RESTQ13127 1097 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 PPFIA1Q13136 1202 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 RAB30Q15771 203 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 TAF12Q16514 161 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 CYP2A13Q16696 494 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 ZNF750Q32MQ0 723 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 BEAN1Q3B7T3 259 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 TBC1D25Q3MII6 688 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 KLHL22Q53GT1 634 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 ALFQ53S48 1182 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 RBM20Q5T481 1227 aaKnown RBP2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 Q6YL49 198 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 RAB11FIP2Q7L804 512 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 WDR53Q7Z5U6 358 aaPredicted RBP2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 GALNT15Q8N3T1 639 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 FSTL5Q8N475 847 aaPredicted RBP2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 CELF5Q8N6W0 485 aaKnown RBP2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 MBD3L2Q8NHZ7 208 aaPredicted RBP2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 PNISRQ8TF01 805 aaKnown RBP2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 CPT1BQ92523 772 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 PPP2R3CQ969Q6 453 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 RSPRY1Q96DX4 576 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 ZSCAN31Q96LW9 406 aaPredicted RBP2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 ZNF778Q96MU6 729 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 HIST1H2AAQ96QV6 131 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 ZSWIM1Q9BR11 485 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 SNX15Q9NRS6 342 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 CTTNBP2NLQ9P2B4 639 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 CDC23Q9UJX2 597 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 CCNL1Q9UK58 526 aaPredicted RBP2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 NDRG4Q9ULP0 352 aaKnown RBP2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 SUFUQ9UMX1 484 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 AGAP1Q9UPQ3 857 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 HPSEQ9Y251 543 aa2.99□□□□□ -1.93
RNU6-1140P-201ENST00000410517 MST1RQ04912 1400 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms