RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 CGRRF1Q99675 332 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 MCMBPQ9BTE3 642 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 HEMGNQ9BXL5 484 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 LHX5Q9H2C1 402 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 VCX3BQ9H321 246 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 EBF3Q9H4W6 596 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 USP29Q9HBJ7 922 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 VCX3AQ9NNX9 186 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 HERC5Q9UII4 1024 aaKnown RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 EMCNQ9ULC0 261 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 ZNF541Q9H0D2 1346 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 BRWD3Q6RI45 1802 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 CFAP69A5D8W1 941 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 H0Y3Z8 333 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 APOC4-APOC2K7ER74 178 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 ATP2A1O14983 1001 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 SLC16A4O15374 487 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 FBXO21O94952 628 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 HLA-DRAP01903 254 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 APOC2P02655 101 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 TFAP2AP05549 437 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 BPGMP07738 259 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 FAM163BP0C2L3 166 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 SLURP2P0DP57 97 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 ESRRAP11474 423 aaPredicted RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 BGNP21810 368 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 EIF4BP23588 611 aaKnown RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 SSTR1P30872 391 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 RGS2P41220 211 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 GJA8P48165 433 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 HARS2P49590 506 aaKnown RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 SNAP25P60880 206 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 PSMC5P62195 406 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 RPL7AP62424 266 aaKnown RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 YWHAZP63104 245 aaKnown RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 PLCB3Q01970 1234 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 ASPHQ12797 758 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 NOMO1Q15155 1222 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 MAP3K21Q5TCX8 1036 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 STRIP1Q5VSL9 837 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 FBXL19Q6PCT2 694 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 ATG14Q6ZNE5 492 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 ANO5Q75V66 913 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 ZNF534Q76KX8 674 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 MIER3Q7Z3K6 550 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 ALYREFQ86V81 257 aaKnown RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 ZC3H18Q86VM9 953 aaKnown RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 SLC26A11Q86WA9 606 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 FBXO36Q8NEA4 188 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 IL31RAQ8NI17 732 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 ACMSDQ8TDX5 336 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 POMGNT1Q8WZA1 660 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 FAF2Q96CS3 445 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 DGCR14Q96DF8 476 aaKnown RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 CNDP1Q96KN2 507 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 SRPK1Q96SB4 655 aaKnown RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 FAM129BQ96TA1 746 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 INO80BQ9C086 356 aaPredicted RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 C20orf27Q9GZN8 174 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 WWP1Q9H0M0 922 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 FAM124BQ9H5Z6 455 aaPredicted RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 TIMMDC1Q9NPL8 285 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 XPNPEP1Q9NQW7 623 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 SMYD2Q9NRG4 433 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 C1orf112Q9NSG2 853 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 NDE1Q9NXR1 346 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 MOCS1Q9NZB8 636 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 FEM1BQ9UK73 627 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 ADAMTS6Q9UKP5 1117 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 RAB26Q9ULW5 256 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 PTPRFP10586 1907 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 FAM237BA0A1B0GVD1 139 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 FAM155AB1AL88 458 aaPredicted RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 B2RBV5 119 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 POC1B-GALNT4F8VUJ3 575 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 H0YCG3 227 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 TLR3O15455 904 aaKnown RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 LPXNO60711 386 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 BANF1O75531 89 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 TMCC1O94876 653 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 ASS1P00966 412 aaKnown RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 CALCAP01258 141 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 KRT1P04264 644 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 ITGA2BP08514 1039 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 FGF3P11487 239 aaPredicted RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 HARSP12081 509 aaKnown RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 KRT10P13645 584 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 VAV1P15498 845 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 VCLP18206 1134 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 KDELR1P24390 212 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 CNTFP26441 200 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 IL1R2P27930 398 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 GNA15P30679 374 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 ALDH3B2P48448 385 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 CHN2P52757 468 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 AP3M2P53677 418 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 MTTPP55157 894 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 NOP14P78316 857 aaKnown RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 HPCAP84074 193 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms