RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 TERB1Q8NA31 727 aa9.68□□□□□ -0.86
NIF3L1-203ENST00000409129 KLF16Q9BXK1 252 aaPredicted RBP9.68□□□□□ -0.86
NIF3L1-203ENST00000409129 NUSAP1Q9BXS6 441 aaKnown RBP9.68□□□□□ -0.86
NIF3L1-203ENST00000409129 TLR8Q9NR97 1041 aaKnown RBP9.68□□□□□ -0.86
NIF3L1-203ENST00000409129 TMEM74BQ9NUR3 256 aa9.68□□□□□ -0.86
NIF3L1-203ENST00000409129 HMGXB4Q9UGU5 601 aa9.68□□□□□ -0.86
NIF3L1-203ENST00000409129 HCN2Q9UL51 889 aa9.68□□□□□ -0.86
NIF3L1-203ENST00000409129 STARD13Q9Y3M8 1113 aa9.68□□□□□ -0.86
NIF3L1-203ENST00000409129 MYOFQ9NZM1 2061 aa9.68□□□□□ -0.86
NIF3L1-203ENST00000409129 MUC22E2RYF6 1773 aaPredicted RBP9.68□□□□□ -0.86
NIF3L1-203ENST00000409129 UNC79Q9P2D8 2635 aa9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 TRIM24O15164 1050 aa9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 AP5Z1O43299 807 aa9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 GREM1O60565 184 aa9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 ASS1P00966 412 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 HLA-DRAP01903 254 aa9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 HSP90AA1P07900 732 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 FAM200BP0CF97 657 aa9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 GABRG2P18507 467 aa9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 TRIM21P19474 475 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 ADORA2BP29275 332 aa9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 NTSR1P30989 418 aa9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 ATP5C1P36542 298 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 ASPAP45381 313 aa9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 DNM1Q05193 864 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 C1orf220Q5T0J3 134 aa9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 LYSMD4Q5XG99 296 aa9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 CEP135Q66GS9 1140 aa9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 GRAMD4Q6IC98 578 aa9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 SPOPLQ6IQ16 392 aa9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 SDE2Q6IQ49 451 aa9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 SLC23A3Q6PIS1 610 aa9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 MIB1Q86YT6 1006 aa9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 XPO6Q96QU8 1125 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 HNRNPABQ99729 332 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 KRTAP3-3Q9BYR6 98 aa9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 KRTAP3-2Q9BYR7 98 aa9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 CYLDQ9NQC7 956 aa9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 FAM49BQ9NUQ9 324 aa9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 DNAJC17Q9NVM6 304 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 WDR35Q9P2L0 1181 aa9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 LSM7Q9UK45 103 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 PILRBQ9UKJ0 227 aa9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 SCML2Q9UQR0 700 aa9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 FRMD4BQ9Y2L6 1034 aa9.67□□□□□ -0.86
NIF3L1-203ENST00000409129 A0A1W2PQF6 199 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 HHLA1C9JL84 531 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 NEDD8-MDP1E9PL57 170 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 MAPK13O15264 365 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 ZBTB24O43167 697 aaPredicted RBP9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 CYP26A1O43174 497 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 CALUO43852 315 aaPredicted RBP9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 CACNG3O60359 315 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 MYL1P05976 194 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 PLA2G2AP14555 144 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 HOXB2P14652 356 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 TYRP14679 529 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 ENGP17813 658 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 ACO1P21399 889 aaKnown RBP9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 ITPKAP23677 461 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 CMA1P23946 247 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 HOXD12P35452 270 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 PIK3CAP42336 1068 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 WASP42768 502 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 PLA2G4AP47712 749 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 VAMP7P51809 220 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 RPL6Q02878 288 aaKnown RBP9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 GOLGA8FQ08AF8 430 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 GOLGA8DPQ0D2H9 430 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 INCA1Q0VD86 236 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 DUOXA1Q1HG43 343 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 PEAR1Q5VY43 1037 aaPredicted RBP9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 SLC36A4Q6YBV0 504 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 TPGS1Q6ZTW0 290 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 CLEC20AQ6ZU45 233 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 GPRIN1Q7Z2K8 1008 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 LURAP1LQ8IV03 231 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 DEFB119Q8N690 84 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 CEP76Q8TAP6 659 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 CYFIP2Q96F07 1278 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 TWNKQ96RR1 684 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 ACOX2Q99424 681 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 BBS2Q9BXC9 721 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 NT5C1AQ9BXI3 368 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 CYP3A43Q9HB55 503 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 NMUR1Q9HB89 426 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 OSER1Q9NX31 292 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 MARK1Q9P0L2 795 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 CALCOCO1Q9P1Z2 691 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 USP25Q9UHP3 1055 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 SLC6A14Q9UN76 642 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 TRAF3IP3Q9Y228 551 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 PCDHA5Q9Y5H7 936 aa9.66□□□□□ -0.86
NIF3L1-203ENST00000409129 ATXN2Q99700 1313 aaKnown RBP9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 A0A1B0GVL5 298 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 A0A1W2PQH9 124 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 FAM221BA6H8Z2 402 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 PRRT4C9JH25 899 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 ZNF217O75362 1048 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms