RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 ZNF132P52740 706 aa9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 LIMK1P53667 647 aa9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 MFAP3P55082 362 aa9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 STX17P56962 302 aa9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 EIF4HQ15056 248 aaKnown RBP9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 CNGA2Q16280 664 aa9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 PLK5Q496M5 336 aa9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 AASDHQ4L235 1098 aaPredicted RBP9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 SPDYCQ5MJ68 293 aa9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 NUGGCQ68CJ6 796 aa9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 Q6ZNB5 142 aa9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 KBTBD6Q86V97 674 aa9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 C12orf40Q86WS4 652 aa9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 TMEM25Q86YD3 366 aa9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 CHPFQ8IZ52 775 aa9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 PGBD3Q8N328 593 aa9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 PHTF2Q8N3S3 785 aa9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 NAT16Q8N8M0 369 aa9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 IL17RCQ8NAC3 791 aa9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 RBBP8NLQ8NC74 664 aaPredicted RBP9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 EHBP1Q8NDI1 1231 aa9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 SLC2A11Q9BYW1 496 aa9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 INTS2Q9H0H0 1204 aaKnown RBP9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 SLC27A6Q9Y2P4 619 aa9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 FRYLO94915 3013 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 TCRBV21S2A2A0A5A6 115 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 TYW5A2RUC4 315 aaKnown RBP9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 GTPBP10A4D1E9 387 aaKnown RBP9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 SLC30A4O14863 429 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 MDM4O15151 490 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 MAP3K13O43283 966 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 GREM1O60565 184 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 ZNF217O75362 1048 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 PENKP01210 267 aaPredicted RBP9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 ZNF806P0C7X5 589 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 KRT5P13647 590 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 HOXB2P14652 356 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 BMP6P22004 513 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 TGM1P22735 817 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 SNX16P57768 344 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 MPPE1Q53F39 396 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 BSPRYQ5W0U4 402 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 PMS2CLQ68D20 193 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 IL31Q6EBC2 164 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 SLC36A4Q6YBV0 504 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 GBP6Q6ZN66 633 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 TPGS1Q6ZTW0 290 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 LPCAT2Q7L5N7 544 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 CYP2U1Q7Z449 544 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 ANKS1BQ7Z6G8 1248 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 RABEPKQ7Z6M1 372 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 CCDC117Q8IWD4 279 aaPredicted RBP9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 UNC45BQ8IWX7 931 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 MDGA1Q8NFP4 955 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 STK32AQ8WU08 396 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 DDX50Q9BQ39 737 aaKnown RBP9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 ARRDC1-AS1Q9H2J1 176 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 PARD6AQ9NPB6 346 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 NUDT5Q9UKK9 219 aa9.5□□□□□ -0.89
SNORD88A-201ENST00000408314 ATG2BQ96BY7 2078 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 DMDP11532 3685 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 SGK1O00141 431 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 TIMM44O43615 452 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 HMBSP08397 361 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 LCP1P13796 627 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 HOXD12P35452 270 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 MTIF2P46199 727 aaKnown RBP9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 SLC11A2P49281 568 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 PGFP49763 221 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 DAOAP59103 153 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 CREB5Q02930 508 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 ARID5AQ03989 594 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 NNTQ13423 1086 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 TRIP4Q15650 581 aaPredicted RBP9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 CAMK4Q16566 473 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 PKDCCQ504Y2 493 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 CT47A1Q5JQC4 288 aaPredicted RBP9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 MSANTD2Q6P1R3 559 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 RRAGAQ7L523 313 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 CREBRFQ8IUR6 639 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 DENND1CQ8IV53 801 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 FMNL3Q8IVF7 1028 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 OLIG1Q8TAK6 271 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 LMO3Q8TAP4 145 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 UBA3Q8TBC4 463 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 WFIKKN2Q8TEU8 576 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 DDI1Q8WTU0 396 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 SLC35F5Q8WV83 523 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 HMGB4Q8WW32 186 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 SERPINB11Q96P15 392 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 NOX5Q96PH1 765 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 GBP4Q96PP9 640 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 TPSD1Q9BZJ3 242 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 DUSP15Q9H1R2 295 aaPredicted RBP9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 CLSTN2Q9H4D0 955 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 THAP9Q9H5L6 903 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 APEX2Q9UBZ4 518 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 CNTN6Q9UQ52 1028 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms