RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 PAEPP09466 180 aa20.21■□□□□ 0.83
SMARCB1-204ENST00000407422 SDHBP21912 280 aa20.21■□□□□ 0.83
SMARCB1-204ENST00000407422 BCKDHBP21953 392 aa20.21■□□□□ 0.83
SMARCB1-204ENST00000407422 CORO1AP31146 461 aaKnown RBP20.21■□□□□ 0.83
SMARCB1-204ENST00000407422 MARSP56192 900 aaKnown RBP20.21■□□□□ 0.83
SMARCB1-204ENST00000407422 USP39Q53GS9 565 aaKnown RBP20.21■□□□□ 0.83
SMARCB1-204ENST00000407422 LCLAT1Q6UWP7 414 aa20.21■□□□□ 0.83
SMARCB1-204ENST00000407422 EHBP1Q8NDI1 1231 aa20.21■□□□□ 0.83
SMARCB1-204ENST00000407422 IPO9Q96P70 1041 aaKnown RBP20.21■□□□□ 0.83
SMARCB1-204ENST00000407422 AGO1Q9UL18 857 aaKnown RBP20.21■□□□□ 0.83
SMARCB1-204ENST00000407422 CNOT1A5YKK6 2376 aaKnown RBP20.21■□□□□ 0.83
SMARCB1-204ENST00000407422 SLC12A8A0AV02 714 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 DCDC2BA2VCK2 349 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 YJEFN3A6XGL0 299 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 E7ENQ6 273 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 CISD3P0C7P0 127 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 BRD2P25440 801 aaKnown RBP20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 WASP42768 502 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 ELF2Q15723 593 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 PLA2G2CQ5R387 149 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 EGFLAMQ63HQ2 1017 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 DENND1CQ8IV53 801 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 TRIML1Q8N9V2 468 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 HMGB4Q8WW32 186 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 RLN3Q8WXF3 142 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 EDEM1Q92611 657 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 KREMEN1Q96MU8 473 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 ACOX2Q99424 681 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 POLMQ9NP87 494 aaPredicted RBP20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 RXFP3Q9NSD7 469 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 STARD13Q9Y3M8 1113 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 TCRBV21S2A2A0A5A6 115 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 PIK3R2O00459 728 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 ALDH1A2O94788 518 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 AFPP02771 609 aaKnown RBP20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 ZNF806P0C7X5 589 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 SETSIPP0DME0 302 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 LCP1P13796 627 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 MPLP40238 635 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 RGS7P49802 495 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 BSPRYQ5W0U4 402 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 PMF1Q6P1K2 205 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 NUDT18Q6ZVK8 323 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 SIX6OS1Q8N1H7 587 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 FRMD1Q8N878 549 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 RBBP8NLQ8NC74 664 aaPredicted RBP20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 OLIG1Q8TAK6 271 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 NETO1Q8TDF5 533 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 KCNV2Q8TDN2 545 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 SLC35F5Q8WV83 523 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 KCTD13Q8WZ19 329 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 MED15Q96RN5 788 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 CHMP5Q9NZZ3 219 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 STRIP2Q9ULQ0 834 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 ZNF510Q9Y2H8 683 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 PCDHGA5Q9Y5G8 931 aa20.2■□□□□ 0.82
SMARCB1-204ENST00000407422 RHOBTB1O94844 696 aa20.19■□□□□ 0.82
SMARCB1-204ENST00000407422 DGKGP49619 791 aa20.19■□□□□ 0.82
SMARCB1-204ENST00000407422 ZNF132P52740 706 aa20.19■□□□□ 0.82
SMARCB1-204ENST00000407422 GCNT1Q02742 428 aa20.19■□□□□ 0.82
SMARCB1-204ENST00000407422 CNGA2Q16280 664 aa20.19■□□□□ 0.82
SMARCB1-204ENST00000407422 FYB2Q5VWT5 728 aa20.19■□□□□ 0.82
SMARCB1-204ENST00000407422 FMNL3Q8IVF7 1028 aa20.19■□□□□ 0.82
SMARCB1-204ENST00000407422 ERLEC1Q96DZ1 483 aa20.19■□□□□ 0.82
SMARCB1-204ENST00000407422 RTKNQ9BST9 563 aa20.19■□□□□ 0.82
SMARCB1-204ENST00000407422 DCLK3Q9C098 648 aa20.19■□□□□ 0.82
SMARCB1-204ENST00000407422 INTS2Q9H0H0 1204 aaKnown RBP20.19■□□□□ 0.82
SMARCB1-204ENST00000407422 BCCIPQ9P287 314 aaKnown RBP eCLIP20.19■□□□□ 0.82
SMARCB1-204ENST00000407422 SFMBT1Q9UHJ3 866 aa20.19■□□□□ 0.82
SMARCB1-204ENST00000407422 PLXND1Q9Y4D7 1925 aa20.18■□□□□ 0.82
SMARCB1-204ENST00000407422 M0QYV0 167 aa20.18■□□□□ 0.82
SMARCB1-204ENST00000407422 PENKP01210 267 aaPredicted RBP20.18■□□□□ 0.82
SMARCB1-204ENST00000407422 CREB5Q02930 508 aa20.18■□□□□ 0.82
SMARCB1-204ENST00000407422 PMS2CLQ68D20 193 aa20.18■□□□□ 0.82
SMARCB1-204ENST00000407422 TCEAL6Q6IPX3 200 aa20.18■□□□□ 0.82
SMARCB1-204ENST00000407422 TRMT11Q7Z4G4 463 aaKnown RBP20.18■□□□□ 0.82
SMARCB1-204ENST00000407422 TCEAL3Q969E4 200 aa20.18■□□□□ 0.82
SMARCB1-204ENST00000407422 RWDD2AQ9UIY3 292 aa20.18■□□□□ 0.82
SMARCB1-204ENST00000407422 FBXO10Q9UK96 956 aa20.18■□□□□ 0.82
SMARCB1-204ENST00000407422 A0A1W2PQF6 199 aa20.17■□□□□ 0.82
SMARCB1-204ENST00000407422 SLC30A4O14863 429 aa20.17■□□□□ 0.82
SMARCB1-204ENST00000407422 HOXB2P14652 356 aa20.17■□□□□ 0.82
SMARCB1-204ENST00000407422 NTSR1P30989 418 aa20.17■□□□□ 0.82
SMARCB1-204ENST00000407422 CHKAP35790 457 aa20.17■□□□□ 0.82
SMARCB1-204ENST00000407422 DAOAP59103 153 aa20.17■□□□□ 0.82
SMARCB1-204ENST00000407422 AASDHQ4L235 1098 aaPredicted RBP20.17■□□□□ 0.82
SMARCB1-204ENST00000407422 CHPFQ8IZ52 775 aa20.17■□□□□ 0.82
SMARCB1-204ENST00000407422 PGBD3Q8N328 593 aa20.17■□□□□ 0.82
SMARCB1-204ENST00000407422 C12orf50Q8NA57 414 aaPredicted RBP20.17■□□□□ 0.82
SMARCB1-204ENST00000407422 CNGB3Q9NQW8 809 aa20.17■□□□□ 0.82
SMARCB1-204ENST00000407422 BCLAF3A2AJT9 711 aaKnown RBP20.16■□□□□ 0.82
SMARCB1-204ENST00000407422 FOXD2O60548 495 aaPredicted RBP20.16■□□□□ 0.82
SMARCB1-204ENST00000407422 P2RY2P41231 377 aa20.16■□□□□ 0.82
SMARCB1-204ENST00000407422 TRIP4Q15650 581 aaPredicted RBP20.16■□□□□ 0.82
SMARCB1-204ENST00000407422 CREBRFQ8IUR6 639 aa20.16■□□□□ 0.82
SMARCB1-204ENST00000407422 CLEC4CQ8WTT0 213 aa20.16■□□□□ 0.82
SMARCB1-204ENST00000407422 RNF139Q8WU17 664 aa20.16■□□□□ 0.82
SMARCB1-204ENST00000407422 PLD4Q96BZ4 506 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms