RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 FAM8A1Q9UBU6 413 aa4.9□□□□□ -1.63
PCDH11X-207ENST00000406881 MORF4L1Q9UBU8 362 aa4.9□□□□□ -1.63
PCDH11X-207ENST00000406881 FAM153AQ9UHL3 310 aa4.9□□□□□ -1.63
PCDH11X-207ENST00000406881 ST3GAL5Q9UNP4 418 aa4.9□□□□□ -1.63
PCDH11X-207ENST00000406881 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.9□□□□□ -1.63
PCDH11X-207ENST00000406881 SLC30A1Q9Y6M5 507 aa4.9□□□□□ -1.63
PCDH11X-207ENST00000406881 NAV1Q8NEY1 1877 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 SLC12A8A0AV02 714 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 GOLGA8RI6L899 631 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 ADCY6O43306 1168 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 DIAPH2O60879 1101 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 UPP2O95045 317 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 HMBSP08397 361 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 HOXB8P17481 243 aaPredicted RBP4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 KRT4P19013 534 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 ACAT1P24752 427 aaKnown RBP4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 YWHAQP27348 245 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 RENBPP51606 427 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 PRMT2P55345 433 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 OXCT1P55809 520 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 TBX4P57082 545 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 SMARCB1Q12824 385 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 PLD1Q13393 1074 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 DPYSL3Q14195 570 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 PARP6Q2NL67 630 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 DEFB115Q30KQ5 88 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 PRAMEF19Q5SWL8 479 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 GJC2Q5T442 439 aaPredicted RBP4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 WSCD1Q658N2 575 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 SCARA3Q6AZY7 606 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 MRNIPQ6NTE8 343 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 ITIH5Q86UX2 942 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 PIGZQ86VD9 579 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 ZSWIM2Q8NEG5 633 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 ATXN2LQ8WWM7 1075 aaKnown RBP4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 ALG3Q92685 438 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 HAUS8Q9BT25 410 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 VCX3AQ9NNX9 186 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 FAM105AQ9NUU6 356 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 NAALADL1Q9UQQ1 740 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 FNDC3AQ9Y2H6 1198 aaKnown RBP4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 STYXL1Q9Y6J8 313 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 SCN7AQ01118 1682 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 UBA6A0AVT1 1052 aaPredicted RBP4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 GPR25O00155 361 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 MAP3K7O43318 606 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 PARNO95453 639 aaKnown RBP4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 JCHAINP01591 159 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 LRG1P02750 347 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 SMPD1P17405 629 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 MATKP42679 507 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 SCNN1GP51170 649 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 SEC24CP53992 1094 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 PRKAA2P54646 552 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 EPHB3P54753 998 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 ARHGAP1Q07960 439 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 CDH17Q12864 832 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 TUSC3Q13454 348 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 IRF5Q13568 498 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 RBBP5Q15291 538 aaKnown RBP4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 AARS2Q5JTZ9 985 aaKnown RBP4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 SPANXN3Q5MJ09 141 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 FAXCQ5TGI0 409 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 CDCA2Q69YH5 1023 aaPredicted RBP4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 MYLK4Q86YV6 388 aaPredicted RBP4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 HERC6Q8IVU3 1022 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 LRRC34Q8IZ02 419 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 C1orf127Q8N9H9 656 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 C12orf50Q8NA57 414 aaPredicted RBP4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 TSEN2Q8NCE0 465 aaKnown RBP4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 ELMO2Q96JJ3 720 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 FAR2Q96K12 515 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 CINPQ9BW66 212 aaPredicted RBP4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 DUSP16Q9BY84 665 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 MUC3BQ9H195 1237 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 TRPC7Q9HCX4 862 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 DPP7Q9UHL4 492 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 DDX60Q8IY21 1712 aaKnown RBP4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 A0A0A0MRY4 1105 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 SMIM28A0A1B0GU29 152 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 CCDC195A0A1B0GUA6 201 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 CASQ2O14958 399 aaPredicted RBP4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 BNIP3LO60238 219 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 CCDC130P13994 396 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 PGAM1P18669 254 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 AMPD1P23109 780 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 GRK2P25098 689 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 MLH1P40692 756 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 ELK3P41970 407 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 RGS4P49798 205 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 PDAP1Q13442 181 aaKnown RBP4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 BIRC2Q13490 618 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 FAM83EQ2M2I3 478 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 NBPF20Q3BBV1 942 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 PTPN20Q4JDL3 420 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 ARHGAP17Q68EM7 881 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 KCNT2Q6UVM3 1135 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 TAS2R42Q7RTR8 314 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 PRUNE1Q86TP1 453 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms