RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 OVOS1Q6IE37 1185 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 TRAF7Q6Q0C0 670 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 SLC24A5Q71RS6 500 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 BNIPLQ7Z465 357 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 PDIK1LQ8N165 341 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 SLC43A3Q8NBI5 491 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 SLC7A14Q8TBB6 771 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 SUSD3Q96L08 255 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 CSNK1G1Q9HCP0 422 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 C9IYK1 514 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 HHLA1C9JL84 531 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 H3BRJ5 948 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 TMEM63AO94886 807 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 CCT5P48643 541 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 SEC24CP53992 1094 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 GBE1Q04446 702 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 NLRP14Q86W24 1093 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 RIBC1Q8N443 379 aaPredicted RBP25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 SLAIN1Q8ND83 568 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 RHOBTB2Q9BYZ6 727 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 RAB6BQ9NRW1 208 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 GMNCA6NCL1 334 aa25.58■■□□□ 1.69
DNMT3A-206ENST00000406659 BANF1O75531 89 aa25.58■■□□□ 1.69
DNMT3A-206ENST00000406659 LTFP02788 710 aa25.58■■□□□ 1.69
DNMT3A-206ENST00000406659 BDNFP23560 247 aa25.58■■□□□ 1.69
DNMT3A-206ENST00000406659 SLC10A2Q12908 348 aaPredicted RBP25.58■■□□□ 1.69
DNMT3A-206ENST00000406659 MBTPS1Q14703 1052 aa25.58■■□□□ 1.69
DNMT3A-206ENST00000406659 BBS9Q3SYG4 887 aa25.58■■□□□ 1.69
DNMT3A-206ENST00000406659 SLC45A4Q5BKX6 768 aa25.58■■□□□ 1.69
DNMT3A-206ENST00000406659 C4orf22Q6V702 233 aa25.58■■□□□ 1.69
DNMT3A-206ENST00000406659 PPP1R21Q6ZMI0 780 aa25.58■■□□□ 1.69
DNMT3A-206ENST00000406659 CAPN12Q6ZSI9 719 aa25.58■■□□□ 1.69
DNMT3A-206ENST00000406659 ZMYND15Q9H091 742 aa25.58■■□□□ 1.69
DNMT3A-206ENST00000406659 CENPFP49454 3210 aa25.58■■□□□ 1.68
DNMT3A-206ENST00000406659 E7ESA3 106 aa25.57■■□□□ 1.68
DNMT3A-206ENST00000406659 CHADO15335 359 aa25.57■■□□□ 1.68
DNMT3A-206ENST00000406659 TRAPPC3O43617 180 aa25.57■■□□□ 1.68
DNMT3A-206ENST00000406659 FYNP06241 537 aa25.57■■□□□ 1.68
DNMT3A-206ENST00000406659 PHBP35232 272 aa25.57■■□□□ 1.68
DNMT3A-206ENST00000406659 TSPY1Q01534 308 aa25.57■■□□□ 1.68
DNMT3A-206ENST00000406659 KCNJ11Q14654 390 aa25.57■■□□□ 1.68
DNMT3A-206ENST00000406659 ARHGEF6Q15052 776 aa25.57■■□□□ 1.68
DNMT3A-206ENST00000406659 MAPRE1Q15691 268 aaKnown RBP25.57■■□□□ 1.68
DNMT3A-206ENST00000406659 MSS51Q4VC12 460 aa25.57■■□□□ 1.68
DNMT3A-206ENST00000406659 EFHC2Q5JST6 749 aa25.57■■□□□ 1.68
DNMT3A-206ENST00000406659 BZW1Q7L1Q6 419 aaKnown RBP25.57■■□□□ 1.68
DNMT3A-206ENST00000406659 ATP11CQ8NB49 1132 aa25.57■■□□□ 1.68
DNMT3A-206ENST00000406659 URGCPQ8TCY9 931 aa25.57■■□□□ 1.68
DNMT3A-206ENST00000406659 XPO6Q96QU8 1125 aaKnown RBP25.57■■□□□ 1.68
DNMT3A-206ENST00000406659 CCT8L2Q96SF2 557 aa25.57■■□□□ 1.68
DNMT3A-206ENST00000406659 PIGVQ9NUD9 493 aa25.57■■□□□ 1.68
DNMT3A-206ENST00000406659 TBK1Q9UHD2 729 aa25.57■■□□□ 1.68
DNMT3A-206ENST00000406659 USP3Q9Y6I4 520 aa25.57■■□□□ 1.68
DNMT3A-206ENST00000406659 NCAM1P13591 858 aa25.56■■□□□ 1.68
DNMT3A-206ENST00000406659 TYMPP19971 482 aa25.56■■□□□ 1.68
DNMT3A-206ENST00000406659 NCBP2-AS2Q69YL0 99 aa25.56■■□□□ 1.68
DNMT3A-206ENST00000406659 RNF139Q8WU17 664 aa25.56■■□□□ 1.68
DNMT3A-206ENST00000406659 SLC9A7Q96T83 725 aa25.56■■□□□ 1.68
DNMT3A-206ENST00000406659 DMAP1Q9NPF5 467 aaPredicted RBP25.56■■□□□ 1.68
DNMT3A-206ENST00000406659 INTS9Q9NV88 658 aaKnown RBP25.56■■□□□ 1.68
DNMT3A-206ENST00000406659 RRN3Q9NYV6 651 aa25.56■■□□□ 1.68
DNMT3A-206ENST00000406659 ZMYND8Q9ULU4 1186 aaPredicted RBP25.56■■□□□ 1.68
DNMT3A-206ENST00000406659 TSC2P49815 1807 aa25.56■■□□□ 1.68
DNMT3A-206ENST00000406659 ARVCFO00192 962 aa25.56■■□□□ 1.68
DNMT3A-206ENST00000406659 ITGB1P05556 798 aa25.56■■□□□ 1.68
DNMT3A-206ENST00000406659 FAM189BP81408 668 aa25.56■■□□□ 1.68
DNMT3A-206ENST00000406659 NOMO2Q5JPE7 1267 aa25.56■■□□□ 1.68
DNMT3A-206ENST00000406659 KCNT2Q6UVM3 1135 aa25.56■■□□□ 1.68
DNMT3A-206ENST00000406659 IRGQQ8WZA9 623 aa25.56■■□□□ 1.68
DNMT3A-206ENST00000406659 QKIQ96PU8 341 aaKnown RBP eCLIP25.56■■□□□ 1.68
DNMT3A-206ENST00000406659 PKMYT1Q99640 499 aa25.56■■□□□ 1.68
DNMT3A-206ENST00000406659 KLC2Q9H0B6 622 aa25.56■■□□□ 1.68
DNMT3A-206ENST00000406659 TMPRSS4Q9NRS4 437 aa25.56■■□□□ 1.68
DNMT3A-206ENST00000406659 ETNK2Q9NVF9 386 aa25.56■■□□□ 1.68
DNMT3A-206ENST00000406659 TMLHEQ9NVH6 421 aa25.56■■□□□ 1.68
DNMT3A-206ENST00000406659 PCDHB8Q9UN66 801 aa25.56■■□□□ 1.68
DNMT3A-206ENST00000406659 POC1B-GALNT4F8VUJ3 575 aa25.55■■□□□ 1.68
DNMT3A-206ENST00000406659 GRK4P32298 578 aa25.55■■□□□ 1.68
DNMT3A-206ENST00000406659 MAP2K2P36507 400 aa25.55■■□□□ 1.68
DNMT3A-206ENST00000406659 PALM2Q8IXS6 379 aa25.55■■□□□ 1.68
DNMT3A-206ENST00000406659 CYP4X1Q8N118 509 aa25.55■■□□□ 1.68
DNMT3A-206ENST00000406659 FBXO36Q8NEA4 188 aa25.55■■□□□ 1.68
DNMT3A-206ENST00000406659 OR10T2Q8NGX3 314 aa25.55■■□□□ 1.68
DNMT3A-206ENST00000406659 ZNF473Q8WTR7 871 aaKnown RBP25.55■■□□□ 1.68
DNMT3A-206ENST00000406659 LRRN4Q8WUT4 740 aa25.55■■□□□ 1.68
DNMT3A-206ENST00000406659 TMEM209Q96SK2 561 aa25.55■■□□□ 1.68
DNMT3A-206ENST00000406659 PPCSQ9HAB8 311 aa25.55■■□□□ 1.68
DNMT3A-206ENST00000406659 ARHGEF4Q9NR80 690 aa25.55■■□□□ 1.68
DNMT3A-206ENST00000406659 DTLQ9NZJ0 730 aa25.55■■□□□ 1.68
DNMT3A-206ENST00000406659 HACD1B0YJ81 288 aa25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 KBTBD13C9JR72 458 aa25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 F8W810 466 aa25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 EBAG9O00559 213 aa25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 CREB3O43889 395 aa25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 FAM107AO95990 144 aa25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 ADRA1BP35368 520 aa25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 AIF1P55008 147 aa25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 GPX6P59796 221 aa25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 TMED2Q15363 201 aa25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 CLLU1OSQ5K130 101 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms