RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 PITX1P78337 314 aaPredicted RBP30.61■■■□□ 2.49
USP42-202ENST00000404008 COG7P83436 770 aa30.61■■■□□ 2.49
USP42-202ENST00000404008 MTF1Q14872 753 aa30.61■■■□□ 2.49
USP42-202ENST00000404008 RAD9BQ6WBX8 426 aa30.61■■■□□ 2.49
USP42-202ENST00000404008 ADAM32Q8TC27 787 aa30.61■■■□□ 2.49
USP42-202ENST00000404008 BPIFB1Q8TDL5 484 aa30.61■■■□□ 2.49
USP42-202ENST00000404008 NT5C3BQ969T7 300 aa30.61■■■□□ 2.49
USP42-202ENST00000404008 NECAB3Q96P71 396 aaPredicted RBP30.61■■■□□ 2.49
USP42-202ENST00000404008 DDX23Q9BUQ8 820 aaKnown RBP30.61■■■□□ 2.49
USP42-202ENST00000404008 RRN3Q9NYV6 651 aa30.61■■■□□ 2.49
USP42-202ENST00000404008 CFAP97Q9P2B7 532 aa30.61■■■□□ 2.49
USP42-202ENST00000404008 HBS1LQ9Y450 684 aaKnown RBP30.61■■■□□ 2.49
USP42-202ENST00000404008 EPN1Q9Y6I3 576 aaPredicted RBP30.61■■■□□ 2.49
USP42-202ENST00000404008 C2CD4BA6NLJ0 364 aa30.6■■■□□ 2.49
USP42-202ENST00000404008 EIF3CLB5ME19 914 aaKnown RBP30.6■■■□□ 2.49
USP42-202ENST00000404008 NDUFA10O95299 355 aa30.6■■■□□ 2.49
USP42-202ENST00000404008 TRUB2O95900 331 aaKnown RBP30.6■■■□□ 2.49
USP42-202ENST00000404008 IRF1P10914 325 aa30.6■■■□□ 2.49
USP42-202ENST00000404008 GPC5P78333 572 aa30.6■■■□□ 2.49
USP42-202ENST00000404008 FCHO2Q0JRZ9 810 aa30.6■■■□□ 2.49
USP42-202ENST00000404008 C10orf76Q5T2E6 689 aa30.6■■■□□ 2.49
USP42-202ENST00000404008 GJD3Q8N144 294 aa30.6■■■□□ 2.49
USP42-202ENST00000404008 TTC16Q8NEE8 873 aa30.6■■■□□ 2.49
USP42-202ENST00000404008 DEPDC1BQ8WUY9 529 aa30.6■■■□□ 2.49
USP42-202ENST00000404008 SERPINB11Q96P15 392 aa30.6■■■□□ 2.49
USP42-202ENST00000404008 MCEEQ96PE7 176 aa30.6■■■□□ 2.49
USP42-202ENST00000404008 NPY6RQ99463 290 aa30.6■■■□□ 2.49
USP42-202ENST00000404008 EIF3CQ99613 913 aaKnown RBP30.6■■■□□ 2.49
USP42-202ENST00000404008 MYO1AQ9UBC5 1043 aa30.6■■■□□ 2.49
USP42-202ENST00000404008 STAP1Q9ULZ2 295 aa30.6■■■□□ 2.49
USP42-202ENST00000404008 SCINQ9Y6U3 715 aa30.6■■■□□ 2.49
USP42-202ENST00000404008 CYP1A2P05177 515 aa30.59■■■□□ 2.49
USP42-202ENST00000404008 H2AFZP0C0S5 128 aa30.59■■■□□ 2.49
USP42-202ENST00000404008 PSMC3P17980 439 aa30.59■■■□□ 2.49
USP42-202ENST00000404008 RPL7AP62424 266 aaKnown RBP30.59■■■□□ 2.49
USP42-202ENST00000404008 NNTQ13423 1086 aa30.59■■■□□ 2.49
USP42-202ENST00000404008 TRIP4Q15650 581 aaPredicted RBP30.59■■■□□ 2.49
USP42-202ENST00000404008 SLC25A52Q3SY17 297 aa30.59■■■□□ 2.49
USP42-202ENST00000404008 OTUD1Q5VV17 481 aaPredicted RBP30.59■■■□□ 2.49
USP42-202ENST00000404008 H2AFVQ71UI9 128 aa30.59■■■□□ 2.49
USP42-202ENST00000404008 LRRC8AQ8IWT6 810 aa30.59■■■□□ 2.49
USP42-202ENST00000404008 SLC44A3Q8N4M1 653 aa30.59■■■□□ 2.49
USP42-202ENST00000404008 WBP2Q969T9 261 aa30.59■■■□□ 2.49
USP42-202ENST00000404008 ADAM33Q9BZ11 813 aa30.59■■■□□ 2.49
USP42-202ENST00000404008 FAM204AQ9H8W3 233 aa30.59■■■□□ 2.49
USP42-202ENST00000404008 CD320Q9NPF0 282 aa30.59■■■□□ 2.49
USP42-202ENST00000404008 STC2O76061 302 aa30.58■■■□□ 2.49
USP42-202ENST00000404008 SLC34A2O95436 690 aa30.58■■■□□ 2.49
USP42-202ENST00000404008 HMBSP08397 361 aa30.58■■■□□ 2.49
USP42-202ENST00000404008 KPNA1P52294 538 aaPredicted RBP30.58■■■□□ 2.49
USP42-202ENST00000404008 EIF4EBP2Q13542 120 aaPredicted RBP30.58■■■□□ 2.49
USP42-202ENST00000404008 DCUN1D2Q6PH85 259 aa30.58■■■□□ 2.49
USP42-202ENST00000404008 CCDC112Q8NEF3 446 aa30.58■■■□□ 2.49
USP42-202ENST00000404008 RXFP2Q8WXD0 754 aa30.58■■■□□ 2.49
USP42-202ENST00000404008 CTNNBL1Q8WYA6 563 aaPredicted RBP30.58■■■□□ 2.49
USP42-202ENST00000404008 PLD4Q96BZ4 506 aa30.58■■■□□ 2.49
USP42-202ENST00000404008 ARHGEF26Q96DR7 871 aa30.58■■■□□ 2.49
USP42-202ENST00000404008 CFAP57Q96MR6 1250 aa30.58■■■□□ 2.49
USP42-202ENST00000404008 MRPL47Q9HD33 250 aaKnown RBP30.58■■■□□ 2.49
USP42-202ENST00000404008 TLR6Q9Y2C9 796 aa30.58■■■□□ 2.49
USP42-202ENST00000404008 E2F8A0AVK6 867 aa30.57■■■□□ 2.48
USP42-202ENST00000404008 IRAK2O43187 625 aa30.57■■■□□ 2.48
USP42-202ENST00000404008 GREM1O60565 184 aa30.57■■■□□ 2.48
USP42-202ENST00000404008 IGLV3-27P01718 113 aa30.57■■■□□ 2.48
USP42-202ENST00000404008 TMEM253P0C7T8 217 aa30.57■■■□□ 2.48
USP42-202ENST00000404008 PDGFRAP16234 1089 aa30.57■■■□□ 2.48
USP42-202ENST00000404008 TFE3P19532 575 aaPredicted RBP30.57■■■□□ 2.48
USP42-202ENST00000404008 SULT1E1P49888 294 aa30.57■■■□□ 2.48
USP42-202ENST00000404008 GRM2Q14416 872 aa30.57■■■□□ 2.48
USP42-202ENST00000404008 SPA17Q15506 151 aa30.57■■■□□ 2.48
USP42-202ENST00000404008 RNF135Q8IUD6 432 aa30.57■■■□□ 2.48
USP42-202ENST00000404008 KIAA1958Q8N8K9 716 aa30.57■■■□□ 2.48
USP42-202ENST00000404008 DDIT4Q9NX09 232 aa30.57■■■□□ 2.48
USP42-202ENST00000404008 CALCOCO1Q9P1Z2 691 aa30.57■■■□□ 2.48
USP42-202ENST00000404008 SH3BP1Q9Y3L3 701 aa30.57■■■□□ 2.48
USP42-202ENST00000404008 TRIOO75962 3097 aa30.57■■■□□ 2.48
USP42-202ENST00000404008 M0QYT0 321 aa30.56■■■□□ 2.48
USP42-202ENST00000404008 GPD1P21695 349 aa30.56■■■□□ 2.48
USP42-202ENST00000404008 TBX4P57082 545 aa30.56■■■□□ 2.48
USP42-202ENST00000404008 RING1Q06587 406 aa30.56■■■□□ 2.48
USP42-202ENST00000404008 CCDC14Q49A88 953 aa30.56■■■□□ 2.48
USP42-202ENST00000404008 PGAP3Q96FM1 320 aaPredicted RBP30.56■■■□□ 2.48
USP42-202ENST00000404008 UHRF1Q96T88 793 aaPredicted RBP30.56■■■□□ 2.48
USP42-202ENST00000404008 TBCBQ99426 244 aa30.56■■■□□ 2.48
USP42-202ENST00000404008 TRMT61BQ9BVS5 477 aaKnown RBP30.56■■■□□ 2.48
USP42-202ENST00000404008 THG1LQ9NWX6 298 aaKnown RBP30.56■■■□□ 2.48
USP42-202ENST00000404008 INTUQ9ULD6 942 aa30.56■■■□□ 2.48
USP42-202ENST00000404008 TMEM191CA6NGB0 347 aa30.55■■■□□ 2.48
USP42-202ENST00000404008 SDC4P31431 198 aa30.55■■■□□ 2.48
USP42-202ENST00000404008 GBP1P32455 592 aa30.55■■■□□ 2.48
USP42-202ENST00000404008 MAGEA1P43355 309 aa30.55■■■□□ 2.48
USP42-202ENST00000404008 PTPN9P43378 593 aa30.55■■■□□ 2.48
USP42-202ENST00000404008 TDGQ13569 410 aa30.55■■■□□ 2.48
USP42-202ENST00000404008 HTR3DQ70Z44 454 aa30.55■■■□□ 2.48
USP42-202ENST00000404008 BNIPLQ7Z465 357 aa30.55■■■□□ 2.48
USP42-202ENST00000404008 YAF2Q8IY57 180 aa30.55■■■□□ 2.48
USP42-202ENST00000404008 SLC39A13Q96H72 371 aa30.55■■■□□ 2.48
USP42-202ENST00000404008 LSM7Q9UK45 103 aaKnown RBP30.55■■■□□ 2.48
USP42-202ENST00000404008 PCDHA13Q9Y5I0 950 aa30.55■■■□□ 2.48
USP42-202ENST00000404008 ZNF143P52747 638 aaPredicted RBP30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms