RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 CKBP12277 381 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 CPA3P15088 417 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 RXRAP19793 462 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 SFPQP23246 707 aaKnown RBP eCLIP6.39□□□□□ -1.39
CLIP4-202ENST00000401605 TBXAS1P24557 533 aaPredicted RBP6.39□□□□□ -1.39
CLIP4-202ENST00000401605 ICAM3P32942 547 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 KCNJ6P48051 423 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 MYL6P60660 151 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 GOLGA8FQ08AF8 430 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 GOLGA8DPQ0D2H9 430 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 GALNT1Q10472 559 aaPredicted RBP6.39□□□□□ -1.39
CLIP4-202ENST00000401605 ADGRE1Q14246 886 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 EPHA7Q15375 998 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 CFAP221Q4G0U5 840 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 PDE12Q6L8Q7 609 aaKnown RBP6.39□□□□□ -1.39
CLIP4-202ENST00000401605 METTL2BQ6P1Q9 378 aaKnown RBP6.39□□□□□ -1.39
CLIP4-202ENST00000401605 DRICH1Q6PGQ1 229 aaPredicted RBP6.39□□□□□ -1.39
CLIP4-202ENST00000401605 SV2BQ7L1I2 683 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 HERC6Q8IVU3 1022 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 COLGALT2Q8IYK4 626 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 ZNF565Q8N9K5 539 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 NCSTNQ92542 709 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 TNIP3Q96KP6 325 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 ACAP3Q96P50 834 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 SPSB2Q99619 263 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 MYL10Q9BUA6 226 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 IFT22Q9H7X7 185 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 PIDD1Q9HB75 910 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 ABCB6Q9NP58 842 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 NLRC4Q9NPP4 1024 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 CRTAC1Q9NQ79 661 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 SH2B1Q9NRF2 756 aaPredicted RBP6.39□□□□□ -1.39
CLIP4-202ENST00000401605 SMYD2Q9NRG4 433 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 ANAPC5Q9UJX4 755 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 COMMD3-BMI1R4GMX3 469 aa6.39□□□□□ -1.39
CLIP4-202ENST00000401605 LRRC37A2A6NM11 1700 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 BECN2A8MW95 431 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 SPATA31C2B4DYI2 1134 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 INO80B-WBP1J3KQ70 363 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 KRIT1O00522 736 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 EFCAB14O75071 495 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 ATP6V1G2O95670 118 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 BAG2O95816 211 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 CXCL10P02778 98 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 CA3P07451 260 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 MYOGP15173 224 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 TARSP26639 723 aaKnown RBP6.38□□□□□ -1.39
CLIP4-202ENST00000401605 VBP1P61758 197 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 SP2Q02086 613 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 SMARCB1Q12824 385 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 GRSF1Q12849 480 aaKnown RBP eCLIP6.38□□□□□ -1.39
CLIP4-202ENST00000401605 RALGDSQ12967 914 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 CYLC2Q14093 348 aaPredicted RBP6.38□□□□□ -1.39
CLIP4-202ENST00000401605 GEN1Q17RS7 908 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 KLHL38Q2WGJ6 581 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 FNDC3BQ53EP0 1204 aaKnown RBP6.38□□□□□ -1.39
CLIP4-202ENST00000401605 SETMARQ53H47 684 aaPredicted RBP6.38□□□□□ -1.39
CLIP4-202ENST00000401605 BMP2KLQ5H9B9 411 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 PEAR1Q5VY43 1037 aaPredicted RBP6.38□□□□□ -1.39
CLIP4-202ENST00000401605 MZT2AQ6P582 158 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 CNKSR3Q6P9H4 555 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 BORAQ6PGQ7 559 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 METTL7BQ6UX53 244 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 CLVS1Q8IUQ0 354 aaPredicted RBP6.38□□□□□ -1.39
CLIP4-202ENST00000401605 CBARPQ8N350 705 aaPredicted RBP6.38□□□□□ -1.39
CLIP4-202ENST00000401605 EHBP1Q8NDI1 1231 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 ZNF540Q8NDQ6 660 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 P3H4Q92791 437 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 ABTB1Q969K4 478 aaPredicted RBP6.38□□□□□ -1.39
CLIP4-202ENST00000401605 TSNARE1Q96NA8 513 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 MNTQ99583 582 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 C16orf70Q9BSU1 422 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 NOD2Q9HC29 1040 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 ARHGEF38Q9NXL2 777 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 PCDHB10Q9UN67 800 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 SLC12A7Q9Y666 1083 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 KANSL1LA0AUZ9 987 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 C17orf102A2RUQ5 167 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 FAM221AA4D161 298 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 SYNDIG1LA6NDD5 238 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 A8MVJ9 347 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 EIF3HO15372 352 aaKnown RBP eCLIP6.38□□□□□ -1.39
CLIP4-202ENST00000401605 ATP9AO75110 1047 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 PLEKHA8P1O95397 391 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 CRYZL1O95825 349 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 KRT6AP02538 564 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 KRT6BP04259 564 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 ASGR2P07307 311 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 PYGMP11217 842 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 ZNF165P49910 485 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 CCNG1P51959 295 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 MRPS9P82933 396 aaKnown RBP6.38□□□□□ -1.39
CLIP4-202ENST00000401605 APBA1Q02410 837 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 DNAJC3Q13217 504 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 GPNMBQ14956 572 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 NECTIN1Q15223 517 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 NONOQ15233 471 aaKnown RBP eCLIP6.38□□□□□ -1.39
CLIP4-202ENST00000401605 STILQ15468 1287 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 FUT11Q495W5 492 aa6.38□□□□□ -1.39
CLIP4-202ENST00000401605 USP17L6PQ6QN14 398 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms