RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 LDLRP01130 860 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 GP5P40197 560 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 NEK3P51956 506 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 LLGL1Q15334 1064 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 MAPK11Q15759 364 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 ERAP2Q6P179 960 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 ATG14Q6ZNE5 492 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 PICK1Q9NRD5 415 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 ADAM30Q9UKF2 790 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 MYPNQ86TC9 1320 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 TECPR2O15040 1411 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 A0A1W2PRG6 482 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 ISPDA4D126 451 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 SPTLC1O15269 473 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 ZNF862O60290 1169 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 TOMM70O94826 608 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 MPOP05164 745 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 TRIM32Q13049 653 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 GRB10Q13322 594 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 POLD3Q15054 466 aaPredicted RBP10.26□□□□□ -0.77
PTPRM-203ENST00000400060 FASTKD1Q53R41 847 aaKnown RBP10.26□□□□□ -0.77
PTPRM-203ENST00000400060 ZNF746Q6NUN9 644 aaPredicted RBP10.26□□□□□ -0.77
PTPRM-203ENST00000400060 POMGNT1Q8WZA1 660 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 RSAD1Q9HA92 442 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 MROH1Q8NDA8 1641 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 GSTT2P0CG29 244 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 GSTT2BP0CG30 244 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 CD58P19256 250 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 ARL4AP40617 200 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 GABPAQ06546 454 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 LAMC2Q13753 1193 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 EPHA7Q15375 998 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 SF3B3Q15393 1217 aaKnown RBP10.26□□□□□ -0.77
PTPRM-203ENST00000400060 TOP1MTQ969P6 601 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 C11orf70Q9BRQ4 267 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 CCSER2Q9H7U1 834 aa10.26□□□□□ -0.77
PTPRM-203ENST00000400060 HNRNPCL2B2RXH8 293 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 KLF11O14901 512 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 ALOX12P18054 663 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 AP3M2P53677 418 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 COPZ1P61923 177 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 RPS6P62753 249 aaKnown RBP10.25□□□□□ -0.77
PTPRM-203ENST00000400060 FOXO4P98177 505 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 MROH9Q5TGP6 573 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 KIAA1841Q6NSI8 718 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.25□□□□□ -0.77
PTPRM-203ENST00000400060 PLA2G12BQ9BX93 195 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 TMEM117Q9H0C3 514 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 PCDH12Q9NPG4 1184 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 ING3Q9NXR8 418 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 GRHL1Q9NZI5 618 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 RBMX2Q9Y388 322 aaKnown RBP10.25□□□□□ -0.77
PTPRM-203ENST00000400060 ARHGEF28Q8N1W1 1705 aaKnown RBP10.25□□□□□ -0.77
PTPRM-203ENST00000400060 CCDC78A2IDD5 438 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 FAM47E-STBD1D6RA91 191 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 KMOO15229 486 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 LZTS3O60299 673 aaPredicted RBP10.25□□□□□ -0.77
PTPRM-203ENST00000400060 DNAJB5O75953 348 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 BTDP43251 543 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 GIT2Q14161 759 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 CTC1Q2NKJ3 1217 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 ASTE1Q2TB18 679 aaPredicted RBP10.25□□□□□ -0.77
PTPRM-203ENST00000400060 DENND5AQ6IQ26 1287 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 MZT2BQ6NZ67 158 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 KATNAL2Q8IYT4 538 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 CYP4X1Q8N118 509 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 FAM136AQ96C01 138 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 MED30Q96HR3 178 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 RNF38Q9H0F5 515 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 A0A1W2PQ72 361 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 NADKO95544 446 aaPredicted RBP10.25□□□□□ -0.77
PTPRM-203ENST00000400060 CASP2P42575 452 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 CSE1LP55060 971 aaKnown RBP10.25□□□□□ -0.77
PTPRM-203ENST00000400060 PPM1LQ5SGD2 360 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 SLCO6A1Q86UG4 719 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 ARMC8Q8IUR7 673 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 OR8H2Q8N162 312 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 CCDC24Q8N4L8 307 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 PTCD3Q96EY7 689 aaKnown RBP10.25□□□□□ -0.77
PTPRM-203ENST00000400060 FKBP14Q9NWM8 211 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 MAGEB16A2A368 324 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 CCDC182A6NF36 153 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 PSMD3O43242 534 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 CCNT2O60583 730 aaKnown RBP10.25□□□□□ -0.77
PTPRM-203ENST00000400060 PRKACBP22694 351 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 ALDH1B1P30837 517 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 ARL13BQ3SXY8 428 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 KBTBD7Q8WVZ9 684 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 ACAT2Q9BWD1 397 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 NMUR2Q9GZQ4 415 aa10.25□□□□□ -0.77
PTPRM-203ENST00000400060 LOC110117498-PIK3R3F6TDL0 507 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 PSMD11O00231 422 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 NEMP1O14524 444 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 CYP26A1O43174 497 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 CRYZL1O95825 349 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 PABPC1P11940 636 aaKnown RBP10.24□□□□□ -0.77
PTPRM-203ENST00000400060 TCN1P20061 433 aaPredicted RBP10.24□□□□□ -0.77
PTPRM-203ENST00000400060 LRPAP1P30533 357 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 SERPINH1P50454 418 aaKnown RBP10.24□□□□□ -0.77
PTPRM-203ENST00000400060 TMBIM6P55061 237 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms