RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 HEY1Q9Y5J3 304 aa12.18□□□□□ -0.46
SKA3-203ENST00000400018 GOLGA6L7A0A1B0GV03 622 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 SLC38A8A6NNN8 435 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 RAD51CO43502 376 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 PRPSAP2O60256 369 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 ZRANB2O95218 330 aaKnown RBP eCLIP12.17□□□□□ -0.46
SKA3-203ENST00000400018 GLI1P08151 1106 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 SP100P23497 879 aaPredicted RBP12.17□□□□□ -0.46
SKA3-203ENST00000400018 CBX2Q14781 532 aaPredicted RBP12.17□□□□□ -0.46
SKA3-203ENST00000400018 ODF2Q5BJF6 829 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 BTBD8Q5XKL5 378 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 TXNDC8Q6A555 127 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 ZC3H18Q86VM9 953 aaKnown RBP12.17□□□□□ -0.46
SKA3-203ENST00000400018 PRELID2Q8N945 189 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 CLP1Q92989 425 aaKnown RBP12.17□□□□□ -0.46
SKA3-203ENST00000400018 RNF38Q9H0F5 515 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 DPH5Q9H2P9 285 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 HCFC2Q9Y5Z7 792 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 C3orf70A6NLC5 250 aaPredicted RBP12.17□□□□□ -0.46
SKA3-203ENST00000400018 ATF2P15336 505 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 AMPD1P23109 780 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 RPL34P49207 117 aaKnown RBP12.17□□□□□ -0.46
SKA3-203ENST00000400018 ZXDBP98169 803 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 PIGHQ14442 188 aaPredicted RBP12.17□□□□□ -0.46
SKA3-203ENST00000400018 SIX1Q15475 284 aaPredicted RBP12.17□□□□□ -0.46
SKA3-203ENST00000400018 POTEHQ6S545 545 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 KCTD13Q8WZ19 329 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 TCEAL4Q96EI5 215 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 PWWP2AQ96N64 755 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 KCTD15Q96SI1 283 aaPredicted RBP12.17□□□□□ -0.46
SKA3-203ENST00000400018 NCAPGQ9BPX3 1015 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 DDX23Q9BUQ8 820 aaKnown RBP12.17□□□□□ -0.46
SKA3-203ENST00000400018 TKTL2Q9H0I9 626 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 WDR35Q9P2L0 1181 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 SPEGQ15772 3267 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 OR6C75A6NL08 312 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 MYO1CO00159 1063 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 PGRMC1O00264 195 aaKnown RBP12.17□□□□□ -0.46
SKA3-203ENST00000400018 CST8O60676 142 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 HSF2BPO75031 334 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 IL4RP24394 825 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 PAFAH1B1P43034 410 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 VCPP55072 806 aaKnown RBP12.17□□□□□ -0.46
SKA3-203ENST00000400018 NFE2Q16621 373 aaPredicted RBP12.17□□□□□ -0.46
SKA3-203ENST00000400018 C10orf120Q5SQS8 335 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 SLC13A5Q86YT5 568 aaPredicted RBP12.17□□□□□ -0.46
SKA3-203ENST00000400018 RFX6Q8HWS3 928 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 STK32AQ8WU08 396 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 UBXN4Q92575 508 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 NPY6RQ99463 290 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 OSBPL8Q9BZF1 889 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 WDR6Q9NNW5 1121 aaKnown RBP12.17□□□□□ -0.46
SKA3-203ENST00000400018 NDFIP2Q9NV92 336 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 DNAJC17Q9NVM6 304 aaKnown RBP12.17□□□□□ -0.46
SKA3-203ENST00000400018 ASNSD1Q9NWL6 643 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 USP3Q9Y6I4 520 aa12.17□□□□□ -0.46
SKA3-203ENST00000400018 C2orf71A6NGG8 1288 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 LILRB3O75022 631 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 KDELR1P24390 212 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 YWHAQP27348 245 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 CCR2P41597 374 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 ACADSBP45954 432 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 PPARDQ03181 441 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 ELAVL2Q12926 359 aaKnown RBP12.16□□□□□ -0.46
SKA3-203ENST00000400018 TAF12Q16514 161 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 EFHC1Q5JVL4 640 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 SEL1L2Q5TEA6 688 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 SPOCD1Q6ZMY3 1216 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 ING5Q8WYH8 240 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 SLC9A7Q96T83 725 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 C11orf84Q9BUA3 381 aaPredicted RBP12.16□□□□□ -0.46
SKA3-203ENST00000400018 CNGB3Q9NQW8 809 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 MTMR10Q9NXD2 777 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 MPP6Q9NZW5 540 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 RASAL2Q9UJF2 1139 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 AP4E1Q9UPM8 1137 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 SART1O43290 800 aaKnown RBP12.16□□□□□ -0.46
SKA3-203ENST00000400018 CTSAP10619 480 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 RARGP13631 454 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 HMGA1P17096 107 aaKnown RBP12.16□□□□□ -0.46
SKA3-203ENST00000400018 VSNL1P62760 191 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 KRT81Q14533 505 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 MAPRE1Q15691 268 aaKnown RBP12.16□□□□□ -0.46
SKA3-203ENST00000400018 WHAMMP3Q1A5X7 153 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 SLC25A52Q3SY17 297 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 PPP2R2DQ66LE6 453 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 LEKR1Q6ZMV7 388 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 DNAJB7Q7Z6W7 309 aaPredicted RBP12.16□□□□□ -0.46
SKA3-203ENST00000400018 C14orf80Q86SX3 495 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 KLHL5Q96PQ7 755 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 CORO1BQ9BR76 489 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 DNPEPQ9ULA0 475 aa12.16□□□□□ -0.46
SKA3-203ENST00000400018 VPS13AQ96RL7 3174 aa12.15□□□□□ -0.46
SKA3-203ENST00000400018 PLXNA3P51805 1871 aa12.15□□□□□ -0.46
SKA3-203ENST00000400018 A0A1W2PRU2 124 aa12.15□□□□□ -0.46
SKA3-203ENST00000400018 H7C4K7 107 aa12.15□□□□□ -0.46
SKA3-203ENST00000400018 ABLIM3O94929 683 aa12.15□□□□□ -0.46
SKA3-203ENST00000400018 ELF1P32519 619 aa12.15□□□□□ -0.46
SKA3-203ENST00000400018 CDKN2BP42772 138 aa12.15□□□□□ -0.46
SKA3-203ENST00000400018 GDF10P55107 478 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms