RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 TRAPPC11Q7Z392 1133 aa14.14□□□□□ -0.15
VAPA-202ENST00000400000 TC2NQ8N9U0 490 aa14.14□□□□□ -0.15
VAPA-202ENST00000400000 FLCNQ8NFG4 579 aa14.14□□□□□ -0.15
VAPA-202ENST00000400000 CYP2W1Q8TAV3 490 aa14.14□□□□□ -0.15
VAPA-202ENST00000400000 REXO4Q9GZR2 422 aaKnown RBP14.14□□□□□ -0.15
VAPA-202ENST00000400000 HDHD2Q9H0R4 259 aa14.14□□□□□ -0.15
VAPA-202ENST00000400000 IL25Q9H293 177 aa14.14□□□□□ -0.15
VAPA-202ENST00000400000 VTI1BQ9UEU0 232 aa14.14□□□□□ -0.15
VAPA-202ENST00000400000 MTO1Q9Y2Z2 717 aaKnown RBP14.14□□□□□ -0.15
VAPA-202ENST00000400000 LAMC1P11047 1609 aa14.14□□□□□ -0.15
VAPA-202ENST00000400000 ARHGEF40Q8TER5 1519 aa14.14□□□□□ -0.15
VAPA-202ENST00000400000 TRIM43BA6NCK2 446 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 LSP1P33241 339 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 TCHHL1Q5QJ38 904 aaPredicted RBP14.13□□□□□ -0.15
VAPA-202ENST00000400000 KIAA1324Q6UXG2 1013 aaKnown RBP14.13□□□□□ -0.15
VAPA-202ENST00000400000 HDDC2Q7Z4H3 204 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 PURBQ96QR8 312 aaKnown RBP14.13□□□□□ -0.15
VAPA-202ENST00000400000 ACTR8Q9H981 624 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 CISHQ9NSE2 258 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 SOHLH2Q9NX45 425 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 DLGAP2Q9P1A6 1054 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 OGTO15294 1046 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 CYP11B1P15538 503 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 HNF4AP41235 474 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 PSMC6P62333 389 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 VAC14Q08AM6 782 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 SBK1Q52WX2 424 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 ZNF697Q5TEC3 545 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 BTBD9Q96Q07 612 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 MROH8Q9H579 483 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 TMCC3Q9ULS5 477 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 SPATA31A5Q5VU36 1347 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 SPATA31A7Q8IWB4 1347 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 RPS12P25398 132 aaKnown RBP14.13□□□□□ -0.15
VAPA-202ENST00000400000 SARSP49591 514 aaKnown RBP14.13□□□□□ -0.15
VAPA-202ENST00000400000 GSTA3Q16772 222 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 RIPOR1Q6ZS17 1223 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 ARHGEF5Q12774 1597 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 USP12O75317 370 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 INSRRP14616 1297 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 MOB2Q70IA6 237 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 TLK2Q86UE8 772 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 EPHX4Q8IUS5 362 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 PCSK9Q8NBP7 692 aaKnown RBP14.13□□□□□ -0.15
VAPA-202ENST00000400000 TAS1R2Q8TE23 839 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 TMEM176AQ96HP8 235 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 CCDC134Q9H6E4 229 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 KLHL20Q9Y2M5 609 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 AAR2Q9Y312 384 aaKnown RBP14.13□□□□□ -0.15
VAPA-202ENST00000400000 CEP152O94986 1710 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 MICAL2O94851 1124 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 VEGFAP15692 232 aaPredicted RBP14.13□□□□□ -0.15
VAPA-202ENST00000400000 RRM1P23921 792 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 TUBP50607 506 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 AP5B1Q2VPB7 878 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 TFDP3Q5H9I0 405 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 IRAK1BP1Q5VVH5 260 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 TNIP2Q8NFZ5 429 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 SPPL2AQ8TCT8 520 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 ELOVL6Q9H5J4 265 aa14.13□□□□□ -0.15
VAPA-202ENST00000400000 CLTCQ00610 1675 aaKnown RBP14.13□□□□□ -0.15
VAPA-202ENST00000400000 PGK1P00558 417 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 CYP11B2P19099 503 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 NDST1P52848 882 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 MMRN1Q13201 1228 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 MFSD10Q14728 455 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 C16orf62Q7Z3J2 963 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 PRUNE1Q86TP1 453 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 REXO1L1PQ8IX06 675 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 KCTD14Q9BQ13 255 aaPredicted RBP14.12□□□□□ -0.15
VAPA-202ENST00000400000 PIPSLA2A3N6 862 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 H3BRB1 525 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 ITGALP20701 1170 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 AMPD1P23109 780 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 FGD3Q5JSP0 725 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 OTUD3Q5T2D3 398 aaPredicted RBP14.12□□□□□ -0.15
VAPA-202ENST00000400000 FBXO33Q7Z6M2 555 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.12□□□□□ -0.151e-12■■■■■ 60.9
VAPA-202ENST00000400000 RNASE11Q8TAA1 199 aaKnown RBP14.12□□□□□ -0.15
VAPA-202ENST00000400000 CASP10Q92851 521 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 CGRRF1Q99675 332 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 COPG1Q9Y678 874 aaKnown RBP14.12□□□□□ -0.15
VAPA-202ENST00000400000 SPATA31A6Q5VVP1 1343 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 ABCA8O94911 1581 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 NDUFS2O75306 463 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 FAM228BP0C875 321 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 SERPINB8P50452 374 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 SRSF11Q05519 484 aaKnown RBP14.12□□□□□ -0.15
VAPA-202ENST00000400000 CXCL9Q07325 125 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 AGKQ53H12 422 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 OVOS1Q6IE37 1185 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 INTS5Q6P9B9 1019 aaKnown RBP14.12□□□□□ -0.15
VAPA-202ENST00000400000 SRLQ86TD4 932 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 ZSCAN18Q8TBC5 510 aaPredicted RBP14.12□□□□□ -0.15
VAPA-202ENST00000400000 ZBTB45Q96K62 511 aaPredicted RBP14.12□□□□□ -0.15
VAPA-202ENST00000400000 TBCDQ9BTW9 1192 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 PRKAG3Q9UGI9 489 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 POLR1AO95602 1720 aaPredicted RBP14.12□□□□□ -0.15
VAPA-202ENST00000400000 ABCC3O15438 1527 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 TMEM253P0C7T8 217 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms