RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 SNRPAP09012 282 aaKnown RBP10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 CRADDP78560 199 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 TMEM62Q0P6H9 643 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 PTP4A2Q12974 167 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 TKFCQ3LXA3 575 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 SCYL2Q6P3W7 929 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 C15orf52Q6ZUT6 534 aaKnown RBP10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 ACAD11Q709F0 780 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 ANO5Q75V66 913 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 PCGF5Q86SE9 256 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 MAP4K3Q8IVH8 894 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 C12orf56Q8IXR9 622 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 TNS4Q8IZW8 715 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 SLC35B2Q8TB61 432 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 MOCOSQ96EN8 888 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 DTNBP1Q96EV8 351 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 MFSD14AQ96MC6 490 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 RIT2Q99578 217 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 PNPOQ9NVS9 261 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 DDX43Q9NXZ2 648 aaKnown RBP10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 RBAKQ9NYW8 714 aaPredicted RBP10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 IL1RAPL1Q9NZN1 696 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 APOBEC2Q9Y235 224 aaKnown RBP10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 DRG1Q9Y295 367 aaKnown RBP10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 LY75O60449 1722 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 RNF223E7ERA6 249 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 AIM2O14862 343 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 DHX15O43143 795 aaKnown RBP10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 DCXO43602 365 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 VNN1O95497 513 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 CST3P01034 146 aaPredicted RBP10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 ASLP04424 464 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 CHN2P52757 468 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 MRPS5P82675 430 aaKnown RBP10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 DLGAP5Q15398 846 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 RAB6CQ53S08 254 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 ENOSF1Q7L5Y1 443 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 SDCCAG8Q86SQ7 713 aaPredicted RBP10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 SLC26A11Q86WA9 606 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 CDAN1Q8IWY9 1227 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 NETO2Q8NC67 525 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 LENG1Q96BZ8 264 aaPredicted RBP10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 PGBD4Q96DM1 585 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 TAAR1Q96RJ0 339 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 TARS2Q9BW92 718 aaKnown RBP10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 RAB6CQ9H0N0 254 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 RAVER2Q9HCJ3 691 aaKnown RBP10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 XAB2Q9HCS7 855 aaKnown RBP10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 GPATCH2LQ9NWQ4 482 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 STK32BQ9NY57 414 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 PHF24Q9UPV7 400 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 PLLPQ9Y342 182 aa10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 HBS1LQ9Y450 684 aaKnown RBP10.23□□□□□ -0.77
PTCHD4-202ENST00000398738 E9PBE3 544 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 KCNN4O15554 427 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 KLHL41O60662 606 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 TGDSO95455 350 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 CCNE2O96020 404 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 CD1EP15812 388 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 ACO1P21399 889 aaKnown RBP10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 MMP8P22894 467 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 COPAP53621 1224 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 CCNIQ14094 377 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 CNGA3Q16281 694 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 SPDYAQ5MJ70 313 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 TTC39BQ5VTQ0 682 aaPredicted RBP10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 SWSAP1Q6NVH7 229 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 TATDN1Q6P1N9 297 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 LCA5Q86VQ0 697 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 SESTD1Q86VW0 696 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 WDR75Q8IWA0 830 aaKnown RBP10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 GMCL1P1Q8NEA9 526 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 NKD2Q969F2 451 aaPredicted RBP10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 PRR14Q9BWN1 585 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 AGO2Q9UKV8 859 aaKnown RBP10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 LZTS1Q9Y250 596 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 DTNAQ9Y4J8 743 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 ZNF541Q9H0D2 1346 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 GOLGA8QA0A0J9YX86 632 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 GOLGA8OA6NCC3 632 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 GOLGA8NF8WBI6 632 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 DHRS4L1P0CG22 281 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 KRT3P12035 628 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 FSHRP23945 695 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 STIP1P31948 543 aaKnown RBP10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 NCKAP1LP55160 1127 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 MRPS9P82933 396 aaKnown RBP10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 NADK2Q4G0N4 442 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 PABPC1LQ4VXU2 614 aaKnown RBP10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 FASTKD1Q53R41 847 aaKnown RBP10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 CHSY1Q86X52 802 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 MAP7D3Q8IWC1 876 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 HACE1Q8IYU2 909 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 KIAA0319LQ8IZA0 1049 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 RAB3IL1Q8TBN0 382 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 GIPC2Q8TF65 315 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 CCDC106Q9BWC9 280 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 IMPG2Q9BZV3 1241 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 AGO4Q9HCK5 861 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms