RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 OR56A5P0C7T3 313 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 HSMCR30P0CW71 290 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 GJA1P17302 382 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 YWHAQP27348 245 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 NOS3P29474 1203 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 CYLC2Q14093 348 aaPredicted RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 SEC23AQ15436 765 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 XKR4Q5GH76 650 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 DEPDC1Q5TB30 811 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 PIAS4Q8N2W9 510 aaPredicted RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 RAD54LQ92698 747 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 BTBD6Q96KE9 485 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 Q96MT0 163 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 CENPOQ9BU64 300 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 MOV10L1Q9BXT6 1211 aaKnown RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 ZMYND12Q9H0C1 365 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 FAM49AQ9H0Q0 323 aaPredicted RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 POLG2Q9UHN1 485 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 DNAJC12Q9UKB3 198 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 PADI4Q9UM07 663 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 MTO1Q9Y2Z2 717 aaKnown RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 TELO2Q9Y4R8 837 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 SPIN1Q9Y657 262 aaPredicted RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 A0A1W2PQJ5 194 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 TOM1L1O75674 476 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 FGGP02679 453 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 VARSP26640 1264 aaKnown RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 FSTL1Q12841 308 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 EMC2Q15006 297 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 CNGA3Q16281 694 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 CERCAMQ5T4B2 595 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 MFSD4BQ5TF39 518 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 PRR5LQ6MZQ0 368 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 CYP20A1Q6UW02 462 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 ATG14Q6ZNE5 492 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 EXOC3L1Q86VI1 746 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 TMC8Q8IU68 726 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 ZNF527Q8NB42 609 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 NOA1Q8NC60 698 aaKnown RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 COG1Q8WTW3 980 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 PTCD2Q8WV60 388 aaKnown RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 KCTD13Q8WZ19 329 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 TESK2Q96S53 571 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 VCPKMTQ9H867 229 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 NKIRAS2Q9NYR9 191 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 TRMT6Q9UJA5 497 aaKnown RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 GNPTGQ9UJJ9 305 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 VAV3Q9UKW4 847 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 AXIN2Q9Y2T1 843 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 PRR5-ARHGAP8B1AHC4 643 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 M0QYV0 167 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 CYB5BO43169 146 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 TREHO43280 583 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 PPP1R37O75864 691 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 CHRM1P11229 460 aaPredicted RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 PFKLP17858 780 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 NR4A1P22736 598 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 DUSP3P51452 185 aaPredicted RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 CCNG1P51959 295 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 ELP6Q0PNE2 266 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 MPP3Q13368 585 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 SNTA1Q13424 505 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 FAM187BQ17R55 369 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 ZNF827Q17R98 1081 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 CATSPEREQ5SY80 951 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 RASIP1Q5U651 963 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 TMEM26Q6ZUK4 368 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 VASH1Q7L8A9 365 aaPredicted RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 NECAB2Q7Z6G3 386 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 KBTBD2Q8IY47 623 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 SPICE1Q8N0Z3 855 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 SCAIQ8N9R8 606 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 ZKSCAN4Q969J2 545 aaPredicted RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 GORASP1Q9BQQ3 440 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 OSBPL10Q9BXB5 764 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 ASB7Q9H672 318 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 SP140LQ9H930 580 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 TIGARQ9NQ88 270 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 ZNF229Q9UJW7 825 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 JAG2Q9Y219 1238 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 ENTPD4Q9Y227 616 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 EIF3LQ9Y262 564 aaKnown RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 AP4S1Q9Y587 144 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 FRMPD2Q68DX3 1309 aaPredicted RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 ARID2Q68CP9 1835 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 SERPINI2O75830 405 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 HEXAP06865 529 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 USP17L7P0C7H9 530 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 BMP4P12644 408 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 CTSEP14091 401 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 CCND1P24385 295 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 SERPINB3P29508 390 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 SERPINB8P50452 374 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 ARHGDIBP52566 201 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 GPC5P78333 572 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 PTH1RQ03431 593 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 ZNF177Q13360 481 aaPredicted RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 PDSS1Q5T2R2 415 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 ATF7IP2Q5U623 682 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms