RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 FYNP06241 537 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 NR3C2P08235 984 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 SELLP14151 372 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 CRABP2P29373 138 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 PRDX5P30044 214 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 ERV3-1Q14264 604 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 SF3B4Q15427 424 aaKnown RBP eCLIP6.82□□□□□ -1.323e-7■■■■□ 21.2
TM9SF4-202ENST00000398022 FOXR2Q6PJQ5 311 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 DYMQ7RTS9 669 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 ERO1BQ86YB8 467 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 ANKRD13CQ8N6S4 541 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 MOSPD2Q8NHP6 518 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 TBCKQ8TEA7 893 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 SNX29Q8TEQ0 813 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 FAM216AQ8WUB2 273 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 EMID1Q96A84 441 aaPredicted RBP6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 HINFPQ9BQA5 517 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 SEMA6BQ9H3T3 888 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 AZI2Q9H6S1 392 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 EPB41L5Q9HCM4 733 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 TRPC7Q9HCX4 862 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 RPH3AQ9Y2J0 694 aaPredicted RBP6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 GPC6Q9Y625 555 aaPredicted RBP6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 FLT1P17948 1338 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 A0A0B4J269 797 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 PRR5-ARHGAP8B1AHC4 643 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 TK2O00142 265 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 ZNF263O14978 683 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 SSBP05455 408 aaKnown RBP eCLIP6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 TMED10P49755 219 aaKnown RBP6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 DNA2P51530 1060 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 GUCY2DQ02846 1103 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 CDK18Q07002 472 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 DNAJC3Q13217 504 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 PLD1Q13393 1074 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 DSG2Q14126 1118 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 HIC1Q14526 733 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 STXBP5Q5T5C0 1151 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 CYP4A22Q5TCH4 519 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 FAM205BPQ63HN1 556 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 TMEM214Q6NUQ4 689 aaKnown RBP6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 ERICH5Q6P6B1 374 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 NLRC3Q7RTR2 1065 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 TSPYL5Q86VY4 417 aaPredicted RBP6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 ZDHHC17Q8IUH5 632 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 KIAA0895Q8NCT3 520 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 TMEM47Q9BQJ4 181 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 CINPQ9BW66 212 aaPredicted RBP6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 RRAGCQ9HB90 399 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 RBM12Q9NTZ6 932 aaKnown RBP6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 LARSQ9P2J5 1176 aaKnown RBP6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 SAP30BPQ9UHR5 308 aaKnown RBP6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 DNM3Q9UQ16 869 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 TYW5A2RUC4 315 aaKnown RBP6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 USP17L3A6NCW0 530 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 USP17L4A6NCW7 530 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 FADS2P1A8MWK0 482 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 H3BRJ5 948 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 ICMTO60725 284 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 ZPR1O75312 459 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 RASSF9O75901 435 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 ENDOD1O94919 500 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 HMGN1P05114 100 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 NR1D1P20393 614 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 LRPAP1P30533 357 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 GRIK1P39086 918 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 MTMR1Q13613 665 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 GALNT3Q14435 633 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 RPS26P11Q5JNZ5 115 aaPredicted RBP6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 KIAA0319Q5VV43 1072 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 RUFY4Q6ZNE9 571 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 USP17L1Q7RTZ2 530 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 C10orf53Q8N6V4 93 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 TMA16Q96EY4 203 aaKnown RBP6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 PRICKLE1Q96MT3 831 aaPredicted RBP6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 RHBGQ9H310 441 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 LRRC19Q9H756 370 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 VAT1LQ9HCJ6 419 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 KLHL11Q9NVR0 708 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 PIM2Q9P1W9 311 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 IFT80Q9P2H3 777 aaPredicted RBP6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 NFU1Q9UMS0 254 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 REV3LO60673 3130 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 ESYT2A0FGR8 921 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 RGSL1A5PLK6 1076 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 ADCY3O60266 1144 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 TLR5O60602 858 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 CRTAPO75718 401 aaPredicted RBP6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 SLC1A4P43007 532 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 ADCY7P51828 1080 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 PPARDQ03181 441 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 GFPT1Q06210 699 aaPredicted RBP6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 LGALS3BPQ08380 585 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 PDCLQ13371 301 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 VEPH1Q14D04 833 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 EFTUD2Q15029 972 aaKnown RBP eCLIP6.81□□□□□ -1.322e-6■■□□□ 14.2
TM9SF4-202ENST00000398022 RPS6KA1Q15418 735 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 KDM7AQ6ZMT4 941 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 KRT74Q7RTS7 529 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 CARFQ8N187 725 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms