RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 ARFGEF2Q9Y6D5 1785 aa15.89■□□□□ 0.13
LSS-202ENST00000397728 TRIM60Q495X7 471 aa15.89■□□□□ 0.13
LSS-202ENST00000397728 ARMC6Q6NXE6 501 aa15.89■□□□□ 0.13
LSS-202ENST00000397728 C12orf56Q8IXR9 622 aa15.89■□□□□ 0.13
LSS-202ENST00000397728 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.89■□□□□ 0.13
LSS-202ENST00000397728 FAM50BQ9Y247 325 aa15.89■□□□□ 0.13
LSS-202ENST00000397728 LRRC10BA6NIK2 292 aa15.88■□□□□ 0.13
LSS-202ENST00000397728 ART3Q13508 389 aa15.88■□□□□ 0.13
LSS-202ENST00000397728 MRNIPQ6NTE8 343 aa15.88■□□□□ 0.13
LSS-202ENST00000397728 FAM183BPQ6ZVS7 135 aa15.88■□□□□ 0.13
LSS-202ENST00000397728 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.88■□□□□ 0.138e-7■□□□□ 10.1
LSS-202ENST00000397728 DDIASQ8IXT1 998 aa15.88■□□□□ 0.13
LSS-202ENST00000397728 KAT2BQ92831 832 aa15.88■□□□□ 0.13
LSS-202ENST00000397728 TRIM55Q9BYV6 548 aa15.88■□□□□ 0.13
LSS-202ENST00000397728 RFC1P35251 1148 aaPredicted RBP15.88■□□□□ 0.13
LSS-202ENST00000397728 LRRC14Q15048 493 aa15.88■□□□□ 0.13
LSS-202ENST00000397728 MAB21L3Q8N8X9 362 aa15.88■□□□□ 0.13
LSS-202ENST00000397728 PPARGC1AQ9UBK2 798 aaKnown RBP15.88■□□□□ 0.13
LSS-202ENST00000397728 A0A1W2PQ45 241 aaPredicted RBP15.88■□□□□ 0.13
LSS-202ENST00000397728 A0A1W2PQY0 241 aa15.88■□□□□ 0.13
LSS-202ENST00000397728 TXNDC9O14530 226 aa15.88■□□□□ 0.13
LSS-202ENST00000397728 ATAT1Q5SQI0 421 aa15.88■□□□□ 0.13
LSS-202ENST00000397728 FAM71AQ8IYT1 594 aa15.88■□□□□ 0.13
LSS-202ENST00000397728 SLC13A4Q9UKG4 626 aa15.88■□□□□ 0.13
LSS-202ENST00000397728 SLC39A10Q9ULF5 831 aa15.88■□□□□ 0.13
LSS-202ENST00000397728 EOMESO95936 686 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 PBX3P40426 434 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 IFT88Q13099 833 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 REXO1L1PQ8IX06 675 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 TBC1D19Q8N5T2 526 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 LZTR1Q8N653 840 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 C1orf127Q8N9H9 656 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 LENG9Q96B70 501 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 FOXP3Q9BZS1 431 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 TASP1Q9H6P5 420 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 AVENQ9NQS1 362 aaPredicted RBP15.87■□□□□ 0.13
LSS-202ENST00000397728 BAIAP2L1Q9UHR4 511 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 PLCH1Q4KWH8 1693 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 TARSL2A2RTX5 802 aaKnown RBP15.87■□□□□ 0.13
LSS-202ENST00000397728 TRDMT1O14717 391 aaKnown RBP15.87■□□□□ 0.13
LSS-202ENST00000397728 BAG2O95816 211 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 CST3P01034 146 aaPredicted RBP15.87■□□□□ 0.13
LSS-202ENST00000397728 FOXD4Q12950 439 aaPredicted RBP15.87■□□□□ 0.13
LSS-202ENST00000397728 PKN2Q16513 984 aaKnown RBP15.87■□□□□ 0.13
LSS-202ENST00000397728 TRMT10CQ7L0Y3 403 aaKnown RBP15.87■□□□□ 0.13
LSS-202ENST00000397728 DSG4Q86SJ6 1040 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 YIPF2Q9BWQ6 316 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 FRMD8P1Q9BZ68 369 aaPredicted RBP15.87■□□□□ 0.13
LSS-202ENST00000397728 TMEM161AQ9NX61 479 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 HEATR9A2RTY3 570 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 GSTA4O15217 222 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 DIAPH2O60879 1101 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 TADA3O75528 432 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 MYO1DO94832 1006 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 RPL17P18621 184 aaKnown RBP15.87■□□□□ 0.13
LSS-202ENST00000397728 CARSP49589 748 aaKnown RBP15.87■□□□□ 0.13
LSS-202ENST00000397728 MAPK7Q13164 816 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 ACAD11Q709F0 780 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 TNS4Q8IZW8 715 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 TCF25Q9BQ70 676 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 C2orf49Q9BVC5 232 aaPredicted RBP15.87■□□□□ 0.13
LSS-202ENST00000397728 RASSF4Q9H2L5 321 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 TRABDQ9H4I3 376 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 CLCA2Q9UQC9 943 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 RWDD3Q9Y3V2 267 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 CDH16O75309 829 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 DDHD2O94830 711 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 TTC4O95801 387 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 ITGALP20701 1170 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 SGCGQ13326 291 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 LONRF1Q17RB8 773 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 MIIPQ5JXC2 388 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 C11orf63Q6NUN7 778 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 MFSD7Q6UXD7 560 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 FAM136AQ96C01 138 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 FRMD8Q9BZ67 464 aaPredicted RBP15.87■□□□□ 0.13
LSS-202ENST00000397728 OSGEPL1Q9H4B0 414 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 TAS2R14Q9NYV8 317 aa15.87■□□□□ 0.13
LSS-202ENST00000397728 WRAP73Q9P2S5 460 aaPredicted RBP15.87■□□□□ 0.13
LSS-202ENST00000397728 APOBEC2Q9Y235 224 aaKnown RBP15.87■□□□□ 0.13
LSS-202ENST00000397728 GLI3P10071 1580 aa15.86■□□□□ 0.13
LSS-202ENST00000397728 CDC25CP30307 473 aa15.86■□□□□ 0.13
LSS-202ENST00000397728 TAF10Q12962 218 aa15.86■□□□□ 0.13
LSS-202ENST00000397728 ZSCAN26Q16670 478 aa15.86■□□□□ 0.13
LSS-202ENST00000397728 COLGALT1Q8NBJ5 622 aa15.86■□□□□ 0.13
LSS-202ENST00000397728 NOA1Q8NC60 698 aaKnown RBP15.86■□□□□ 0.13
LSS-202ENST00000397728 KLF6Q99612 283 aaPredicted RBP15.86■□□□□ 0.13
LSS-202ENST00000397728 CASS4Q9NQ75 786 aa15.86■□□□□ 0.13
LSS-202ENST00000397728 UBA2Q9UBT2 640 aaPredicted RBP15.86■□□□□ 0.13
LSS-202ENST00000397728 NID2Q14112 1375 aa15.86■□□□□ 0.13
LSS-202ENST00000397728 RBAK-RBAKDNI3L0D1 243 aa15.86■□□□□ 0.13
LSS-202ENST00000397728 EPHB6O15197 1021 aa15.86■□□□□ 0.13
LSS-202ENST00000397728 CCL16O15467 120 aa15.86■□□□□ 0.13
LSS-202ENST00000397728 SPAG6O75602 509 aa15.86■□□□□ 0.13
LSS-202ENST00000397728 KCNMA1Q12791 1236 aa15.86■□□□□ 0.13
LSS-202ENST00000397728 GET4Q7L5D6 327 aaPredicted RBP15.86■□□□□ 0.13
LSS-202ENST00000397728 RD3Q7Z3Z2 195 aa15.86■□□□□ 0.13
LSS-202ENST00000397728 DUSP16Q9BY84 665 aa15.86■□□□□ 0.13
LSS-202ENST00000397728 PCMTD2Q9NV79 361 aa15.86■□□□□ 0.13
LSS-202ENST00000397728 CD274Q9NZQ7 290 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms