RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 CNTRLQ7Z7A1 2325 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 EXOC1LA0A1B0GW35 172 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 MARCKSL1P49006 195 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 MAPKAPK2P49137 400 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 NPY2RP49146 381 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 RPL26P61254 145 aaKnown RBP6.07□□□□□ -1.44
PTPRD-206ENST00000397617 SLC18A2Q05940 514 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 RFTN1Q14699 578 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-206ENST00000397617 BBS5Q8N3I7 341 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 RDH11Q8TC12 318 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 MAGEB5Q9BZ81 275 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 PDGFCQ9NRA1 345 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 HBS1LQ9Y450 684 aaKnown RBP6.07□□□□□ -1.44
PTPRD-206ENST00000397617 TEX264Q9Y6I9 313 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 A0A0U1RQJ8 604 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 MAGEA9P43362 315 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 MLLT6P55198 1093 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-206ENST00000397617 GEMIN4P57678 1058 aaKnown RBP6.07□□□□□ -1.44
PTPRD-206ENST00000397617 MGAT3Q09327 533 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 DPYSL3Q14195 570 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 SNX30Q5VWJ9 437 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 HEATR6Q6AI08 1181 aaKnown RBP6.07□□□□□ -1.44
PTPRD-206ENST00000397617 ALG1LQ6GMV1 187 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 ZNF280DQ6N043 979 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 TMEM135Q86UB9 458 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 FAM35AQ86V20 835 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 ZDHHC14Q8IZN3 488 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 ATRIPQ8WXE1 791 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 SAR1AQ9NR31 198 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 KLHL42Q9P2K6 505 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 H2AFYO75367 372 aaKnown RBP6.07□□□□□ -1.44
PTPRD-206ENST00000397617 PSMC4P43686 418 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 SH3BGRP55822 239 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-206ENST00000397617 CORO7P57737 925 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 OTUD4Q01804 1114 aaKnown RBP6.07□□□□□ -1.44
PTPRD-206ENST00000397617 GPR17Q13304 367 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 C6orf89Q6UWU4 347 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 TSEN2Q8NCE0 465 aaKnown RBP6.07□□□□□ -1.44
PTPRD-206ENST00000397617 NPLOC4Q8TAT6 608 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 CKAP2Q8WWK9 683 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 TCF12Q99081 682 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 CATSPERBQ9H7T0 1116 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 AAR2Q9Y312 384 aaKnown RBP6.07□□□□□ -1.44
PTPRD-206ENST00000397617 STARD13Q9Y3M8 1113 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 F8VP50 259 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 TRIM66O15016 1216 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 B4GALT5O43286 388 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 IQCF3P0C7M6 154 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 FLT3LGP49771 235 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 ACLYP53396 1101 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 SLC44A1Q8WWI5 657 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 PRCCQ92733 491 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-206ENST00000397617 DDX50Q9BQ39 737 aaKnown RBP6.07□□□□□ -1.44
PTPRD-206ENST00000397617 AP4E1Q9UPM8 1137 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 NR2E1Q9Y466 385 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 E5RJQ4 531 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 KRT19P08727 400 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 SNRPAP09012 282 aaKnown RBP6.07□□□□□ -1.44
PTPRD-206ENST00000397617 GBP2P32456 591 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-206ENST00000397617 RENBPP51606 427 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 GALNT1Q10472 559 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-206ENST00000397617 KCNJ11Q14654 390 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 KIZQ2M2Z5 673 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 DENND1BQ6P3S1 775 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 PIGWQ7Z7B1 504 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 DENND1AQ8TEH3 1009 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 PYROXD1Q8WU10 500 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 SEPT8Q92599 483 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 OSMRQ99650 979 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 BCAS3Q9H6U6 928 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 PFDN4Q9NQP4 134 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 DPP7Q9UHL4 492 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 DCTN3O75935 186 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 MICAL2O94851 1124 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 SSR1P43307 286 aaKnown RBP6.07□□□□□ -1.44
PTPRD-206ENST00000397617 VASPP50552 380 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-206ENST00000397617 ADCY1Q08828 1119 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 TTC39BQ5VTQ0 682 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-206ENST00000397617 ANKRD33Q7Z3H0 272 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 KSR1Q8IVT5 923 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 TWNKQ96RR1 684 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 EBNA1BP2Q99848 306 aaKnown RBP6.07□□□□□ -1.44
PTPRD-206ENST00000397617 PI4K2AQ9BTU6 479 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 SEMA4AQ9H3S1 761 aa6.07□□□□□ -1.44
PTPRD-206ENST00000397617 NXF3Q9H4D5 531 aaKnown RBP6.07□□□□□ -1.44
PTPRD-206ENST00000397617 DHRS4L1P0CG22 281 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 NFKBIAP25963 317 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 TNFSF9P41273 254 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 ITGA8P53708 1063 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 PTPN5P54829 565 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 FAM228AQ86W67 206 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 KCTD6Q8NC69 237 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 CCDC197Q8NCU1 140 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 PIK3R5Q8WYR1 880 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 SH2D3AQ9BRG2 576 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 COLEC11Q9BWP8 271 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 FRMPD3Q5JV73 1810 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 SDR42E2A6NKP2 422 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 SLCO1B7G3V0H7 640 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 SERPINB4P48594 390 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms