RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 ST20-MTHFSA0A0A6YYL1 179 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 LINC01387J3KSC0 135 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 TNPO2O14787 897 aaKnown RBP7.13□□□□□ -1.27
SMCO1-201ENST00000397537 CEP104O60308 925 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 INHBAP08476 426 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 CKBP12277 381 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 HOXC8P31273 242 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 ADRA1BP35368 520 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 MAGEA8P43361 318 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 SOX8P57073 446 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 SPIRE1Q08AE8 756 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 TRDNQ13061 729 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 CUL2Q13617 745 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 TRADDQ15628 312 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 RAB41Q5JT25 222 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 SPRYD7Q5W111 196 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 FAM111BQ6SJ93 734 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 RAB11FIP2Q7L804 512 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 UBE3BQ7Z3V4 1068 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 KRT28Q7Z3Y7 464 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 CPNE8Q86YQ8 564 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 CNTN4Q8IWV2 1026 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 RHOT2Q8IXI1 618 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 DNAJC5GQ8N7S2 189 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 CNNM3Q8NE01 707 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 KIF18AQ8NI77 898 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 KCNE4Q8WWG9 221 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 RREB1Q92766 1687 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 TEKT1Q969V4 418 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 TUBGCP3Q96CW5 907 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 ABHD17AQ96GS6 310 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 NR1H4Q96RI1 486 aaPredicted RBP7.13□□□□□ -1.27
SMCO1-201ENST00000397537 TUBGCP5Q96RT8 1024 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 MRPL46Q9H2W6 279 aaKnown RBP7.13□□□□□ -1.27
SMCO1-201ENST00000397537 CRLF2Q9HC73 371 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 ZNF304Q9HCX3 659 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 TM9SF3Q9HD45 589 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 TDP1Q9NUW8 608 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 SUCLA2Q9P2R7 463 aaPredicted RBP7.13□□□□□ -1.27
SMCO1-201ENST00000397537 CLIP2Q9UDT6 1046 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 IL19Q9UHD0 177 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 NUP188Q5SRE5 1749 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 CCDC18Q5T9S5 1454 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 KDRP35968 1356 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 SYNGAP1Q96PV0 1343 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 RNF103-CHMP3A0A140T963 221 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 LRRD1A4D1F6 860 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 TMEM233B4DJY2 109 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 KIF2AO00139 706 aaPredicted RBP7.12□□□□□ -1.27
SMCO1-201ENST00000397537 RNF103O00237 685 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 NPHS1O60500 1241 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 CCNDBP1O95273 360 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 MATN4O95460 622 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 ABHD16AO95870 558 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 TXNP10599 105 aaKnown RBP7.12□□□□□ -1.27
SMCO1-201ENST00000397537 MTIF2P46199 727 aaKnown RBP7.12□□□□□ -1.27
SMCO1-201ENST00000397537 ARHGAP8P85298 464 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 MGAT5Q09328 741 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 CTBP1Q13363 440 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 NFIL3Q16649 462 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 NAA35Q5VZE5 725 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 CRELD2Q6UXH1 353 aaPredicted RBP7.12□□□□□ -1.27
SMCO1-201ENST00000397537 CHST3Q7LGC8 479 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 WDR63Q8IWG1 891 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 SFRP1Q8N474 314 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 DCLK2Q8N568 766 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 MRPL43Q8N983 215 aaKnown RBP7.12□□□□□ -1.27
SMCO1-201ENST00000397537 MFSD2AQ8NA29 543 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 SLC5A11Q8WWX8 675 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 RABGGTAQ92696 567 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 WNT8BQ93098 351 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 GIMAP5Q96F15 307 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 KLHDC7BQ96G42 594 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 ZNF518BQ9C0D4 1074 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 ISCUQ9H1K1 167 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 SLC6A14Q9UN76 642 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 MED16Q9Y2X0 877 aa7.12□□□□□ -1.27
SMCO1-201ENST00000397537 ZFYVE9O95405 1425 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 CCNB3Q8WWL7 1395 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 UBA6A0AVT1 1052 aaPredicted RBP7.11□□□□□ -1.27
SMCO1-201ENST00000397537 WTIPA6NIX2 430 aaPredicted RBP7.11□□□□□ -1.27
SMCO1-201ENST00000397537 LIPT2A6NK58 231 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 TMEM232C9JQI7 657 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 SLC27A2O14975 620 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 ZNF263O14978 683 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 WDR46O15213 610 aaKnown RBP7.11□□□□□ -1.27
SMCO1-201ENST00000397537 TNFSF14O43557 240 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 CA12O43570 354 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 EPN2O95208 641 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 PRR35P0CG20 571 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 XRCC6P12956 609 aaKnown RBP eCLIP7.11□□□□□ -1.27
SMCO1-201ENST00000397537 SELLP14151 372 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 GDI1P31150 447 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 PPARGP37231 505 aaPredicted RBP7.11□□□□□ -1.27
SMCO1-201ENST00000397537 CAMLGP49069 296 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 GTF2A1P52655 376 aaPredicted RBP7.11□□□□□ -1.27
SMCO1-201ENST00000397537 ACTR1AP61163 376 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 EXOSC9Q06265 439 aaKnown RBP7.11□□□□□ -1.27
SMCO1-201ENST00000397537 RUNX1T1Q06455 604 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms