RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 EIF3DO15371 548 aaKnown RBP eCLIP15.77■□□□□ 0.12
SEC13-206ENST00000397102 BEST1O76090 585 aa15.77■□□□□ 0.12
SEC13-206ENST00000397102 PENKP01210 267 aaPredicted RBP15.77■□□□□ 0.12
SEC13-206ENST00000397102 PRB1P04280 392 aa15.77■□□□□ 0.12
SEC13-206ENST00000397102 ACADMP11310 421 aa15.77■□□□□ 0.12
SEC13-206ENST00000397102 GRK6P43250 576 aa15.77■□□□□ 0.12
SEC13-206ENST00000397102 PLA2G4AP47712 749 aa15.77■□□□□ 0.12
SEC13-206ENST00000397102 CSNK1EP49674 416 aaKnown RBP15.77■□□□□ 0.12
SEC13-206ENST00000397102 AFF3P51826 1226 aaKnown RBP15.77■□□□□ 0.12
SEC13-206ENST00000397102 COPAP53621 1224 aa15.77■□□□□ 0.12
SEC13-206ENST00000397102 MFAP3P55082 362 aa15.77■□□□□ 0.12
SEC13-206ENST00000397102 E2F5Q15329 346 aa15.77■□□□□ 0.12
SEC13-206ENST00000397102 ENGASEQ8NFI3 743 aa15.77■□□□□ 0.12
SEC13-206ENST00000397102 SLC39A7Q92504 469 aa15.77■□□□□ 0.12
SEC13-206ENST00000397102 ZNF516Q92618 1163 aa15.77■□□□□ 0.12
SEC13-206ENST00000397102 DCBLD2Q96PD2 775 aa15.77■□□□□ 0.12
SEC13-206ENST00000397102 AGPAT3Q9NRZ7 376 aa15.77■□□□□ 0.12
SEC13-206ENST00000397102 OSER1Q9NX31 292 aa15.77■□□□□ 0.12
SEC13-206ENST00000397102 MUC22E2RYF6 1773 aaPredicted RBP15.77■□□□□ 0.11
SEC13-206ENST00000397102 TP53BP1Q12888 1972 aaPredicted RBP15.76■□□□□ 0.11
SEC13-206ENST00000397102 ASH1LQ9NR48 2969 aaKnown RBP15.76■□□□□ 0.11
SEC13-206ENST00000397102 A0A087X0B3 334 aa15.76■□□□□ 0.11
SEC13-206ENST00000397102 ATXN7O15265 892 aaPredicted RBP15.76■□□□□ 0.11
SEC13-206ENST00000397102 TGFB1I1O43294 461 aa15.76■□□□□ 0.11
SEC13-206ENST00000397102 PCDHGA12O60330 932 aa15.76■□□□□ 0.11
SEC13-206ENST00000397102 PHACTR2O75167 634 aa15.76■□□□□ 0.11
SEC13-206ENST00000397102 C1QL1O75973 258 aa15.76■□□□□ 0.11
SEC13-206ENST00000397102 CCDC130P13994 396 aa15.76■□□□□ 0.11
SEC13-206ENST00000397102 MAP3K7CLP57077 242 aa15.76■□□□□ 0.11
SEC13-206ENST00000397102 TEAD4Q15561 434 aa15.76■□□□□ 0.11
SEC13-206ENST00000397102 GEN1Q17RS7 908 aa15.76■□□□□ 0.11
SEC13-206ENST00000397102 KIF19Q2TAC6 998 aa15.76■□□□□ 0.11
SEC13-206ENST00000397102 ZNF667Q5HYK9 610 aa15.76■□□□□ 0.11
SEC13-206ENST00000397102 ACOT1Q86TX2 421 aa15.76■□□□□ 0.11
SEC13-206ENST00000397102 XXYLT1Q8NBI6 393 aa15.76■□□□□ 0.11
SEC13-206ENST00000397102 PIP4K2CQ8TBX8 421 aa15.76■□□□□ 0.11
SEC13-206ENST00000397102 ZNF507Q8TCN5 953 aa15.76■□□□□ 0.11
SEC13-206ENST00000397102 HPS3Q969F9 1004 aa15.76■□□□□ 0.11
SEC13-206ENST00000397102 P2RY11Q96G91 374 aa15.76■□□□□ 0.11
SEC13-206ENST00000397102 GZF1Q9H116 711 aaPredicted RBP15.76■□□□□ 0.11
SEC13-206ENST00000397102 OSGEPQ9NPF4 335 aa15.76■□□□□ 0.11
SEC13-206ENST00000397102 DNMT3LQ9UJW3 386 aa15.76■□□□□ 0.11
SEC13-206ENST00000397102 SCML2Q9UQR0 700 aa15.76■□□□□ 0.11
SEC13-206ENST00000397102 SNX11Q9Y5W9 270 aa15.76■□□□□ 0.11
SEC13-206ENST00000397102 KNL1Q8NG31 2342 aa15.76■□□□□ 0.11
SEC13-206ENST00000397102 COL5A1P20908 1838 aaPredicted RBP15.75■□□□□ 0.11
SEC13-206ENST00000397102 MDM4O15151 490 aa15.75■□□□□ 0.11
SEC13-206ENST00000397102 STC2O76061 302 aa15.75■□□□□ 0.11
SEC13-206ENST00000397102 HLA-EP13747 358 aa15.75■□□□□ 0.11
SEC13-206ENST00000397102 GRIA4P48058 902 aa15.75■□□□□ 0.11
SEC13-206ENST00000397102 CCT8P50990 548 aa15.75■□□□□ 0.11
SEC13-206ENST00000397102 CYP2J2P51589 502 aa15.75■□□□□ 0.11
SEC13-206ENST00000397102 SNRPFP62306 86 aaKnown RBP15.75■□□□□ 0.11
SEC13-206ENST00000397102 ORC1Q13415 861 aa15.75■□□□□ 0.11
SEC13-206ENST00000397102 ZNF234Q14588 700 aa15.75■□□□□ 0.11
SEC13-206ENST00000397102 EIF4HQ15056 248 aaKnown RBP15.75■□□□□ 0.11
SEC13-206ENST00000397102 ZNF699Q32M78 642 aa15.75■□□□□ 0.11
SEC13-206ENST00000397102 FYB2Q5VWT5 728 aa15.75■□□□□ 0.11
SEC13-206ENST00000397102 DHRS13Q6UX07 377 aa15.75■□□□□ 0.11
SEC13-206ENST00000397102 SCARA5Q6ZMJ2 495 aa15.75■□□□□ 0.11
SEC13-206ENST00000397102 EPM2AIP1Q7L775 607 aaPredicted RBP15.75■□□□□ 0.11
SEC13-206ENST00000397102 ANKS1BQ7Z6G8 1248 aa15.75■□□□□ 0.11
SEC13-206ENST00000397102 SLC2A14Q8TDB8 520 aa15.75■□□□□ 0.11
SEC13-206ENST00000397102 SNX19Q92543 992 aa15.75■□□□□ 0.11
SEC13-206ENST00000397102 IGSF8Q969P0 613 aa15.75■□□□□ 0.11
SEC13-206ENST00000397102 PANK2Q9BZ23 570 aa15.75■□□□□ 0.11
SEC13-206ENST00000397102 SDCBP2Q9H190 292 aa15.75■□□□□ 0.11
SEC13-206ENST00000397102 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.75■□□□□ 0.11
SEC13-206ENST00000397102 ANKRD6Q9Y2G4 727 aa15.75■□□□□ 0.11
SEC13-206ENST00000397102 ZNF510Q9Y2H8 683 aa15.75■□□□□ 0.11
SEC13-206ENST00000397102 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.75■□□□□ 0.11
SEC13-206ENST00000397102 SLCO1B1Q9Y6L6 691 aa15.75■□□□□ 0.11
SEC13-206ENST00000397102 NUMA1Q14980 2115 aa15.74■□□□□ 0.11
SEC13-206ENST00000397102 CLIC2O15247 247 aa15.74■□□□□ 0.11
SEC13-206ENST00000397102 CYP26A1O43174 497 aa15.74■□□□□ 0.11
SEC13-206ENST00000397102 CLSTN1O94985 981 aa15.74■□□□□ 0.11
SEC13-206ENST00000397102 RARGP13631 454 aa15.74■□□□□ 0.11
SEC13-206ENST00000397102 PRKCHP24723 683 aa15.74■□□□□ 0.11
SEC13-206ENST00000397102 CHKAP35790 457 aa15.74■□□□□ 0.11
SEC13-206ENST00000397102 BMT2Q1RMZ1 405 aa15.74■□□□□ 0.11
SEC13-206ENST00000397102 INAVAQ3KP66 663 aa15.74■□□□□ 0.11
SEC13-206ENST00000397102 C10orf120Q5SQS8 335 aa15.74■□□□□ 0.11
SEC13-206ENST00000397102 GPRIN1Q7Z2K8 1008 aa15.74■□□□□ 0.11
SEC13-206ENST00000397102 FAM124AQ86V42 546 aa15.74■□□□□ 0.11
SEC13-206ENST00000397102 TMPRSS12Q86WS5 348 aa15.74■□□□□ 0.11
SEC13-206ENST00000397102 CACUL1Q86Y37 369 aa15.74■□□□□ 0.11
SEC13-206ENST00000397102 CRYBG2Q8N1P7 616 aa15.74■□□□□ 0.11
SEC13-206ENST00000397102 LSM14AQ8ND56 463 aaKnown RBP15.74■□□□□ 0.11
SEC13-206ENST00000397102 NXPE2Q96DL1 559 aa15.74■□□□□ 0.11
SEC13-206ENST00000397102 PIWIL1Q96J94 861 aaKnown RBP15.74■□□□□ 0.11
SEC13-206ENST00000397102 LRRC27Q9C0I9 530 aa15.74■□□□□ 0.11
SEC13-206ENST00000397102 TNMDQ9H2S6 317 aa15.74■□□□□ 0.11
SEC13-206ENST00000397102 PRORYQ9H606 182 aa15.74■□□□□ 0.11
SEC13-206ENST00000397102 C6orf106Q9H6K1 298 aaPredicted RBP15.74■□□□□ 0.11
SEC13-206ENST00000397102 NMUR1Q9HB89 426 aa15.74■□□□□ 0.11
SEC13-206ENST00000397102 ELOVL2Q9NXB9 296 aa15.74■□□□□ 0.11
SEC13-206ENST00000397102 NUDT5Q9UKK9 219 aa15.74■□□□□ 0.11
SEC13-206ENST00000397102 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.74■□□□□ 0.11
SEC13-206ENST00000397102 PCDHA5Q9Y5H7 936 aa15.74■□□□□ 0.11
SEC13-206ENST00000397102 UBE4BO95155 1302 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms