RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 EMC1Q8N766 993 aa17.92■□□□□ 0.46
MCF2L-208ENST00000397030 ALKBH4Q9NXW9 302 aa17.92■□□□□ 0.46
MCF2L-208ENST00000397030 USP20Q9Y2K6 914 aa17.92■□□□□ 0.46
MCF2L-208ENST00000397030 DDTLA6NHG4 134 aaPredicted RBP17.92■□□□□ 0.46
MCF2L-208ENST00000397030 METTL7BQ6UX53 244 aa17.92■□□□□ 0.46
MCF2L-208ENST00000397030 SLC30A10Q6XR72 485 aa17.92■□□□□ 0.46
MCF2L-208ENST00000397030 CATSPER1Q8NEC5 780 aa17.92■□□□□ 0.46
MCF2L-208ENST00000397030 ASAH2Q9NR71 780 aa17.92■□□□□ 0.46
MCF2L-208ENST00000397030 C1orf167Q5SNV9 1468 aa17.92■□□□□ 0.46
MCF2L-208ENST00000397030 PEX1O43933 1283 aa17.92■□□□□ 0.46
MCF2L-208ENST00000397030 F9P00740 461 aa17.92■□□□□ 0.46
MCF2L-208ENST00000397030 GEMIN4P57678 1058 aaKnown RBP17.92■□□□□ 0.46
MCF2L-208ENST00000397030 RETSATQ6NUM9 610 aa17.92■□□□□ 0.46
MCF2L-208ENST00000397030 MTERF3Q96E29 417 aa17.92■□□□□ 0.46
MCF2L-208ENST00000397030 TPD52L3Q96J77 140 aa17.92■□□□□ 0.46
MCF2L-208ENST00000397030 PRRG4Q9BZD6 226 aa17.92■□□□□ 0.46
MCF2L-208ENST00000397030 RBM22Q9NW64 420 aaKnown RBP eCLIP17.92■□□□□ 0.463e-6■■■□□ 16.8
MCF2L-208ENST00000397030 GULP1Q9UBP9 304 aa17.92■□□□□ 0.46
MCF2L-208ENST00000397030 SMG5Q9UPR3 1016 aaKnown RBP17.92■□□□□ 0.46
MCF2L-208ENST00000397030 CNTNAP5Q8WYK1 1306 aa17.92■□□□□ 0.46
MCF2L-208ENST00000397030 HS6ST1O60243 411 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 GRK2P25098 689 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 ATP12AP54707 1039 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 NFIL3Q16649 462 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 TMEM154Q6P9G4 183 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 KLHL24Q6TFL4 600 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 CXorf40BQ96DE9 158 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 ZCCHC2Q9C0B9 1178 aaKnown RBP17.91■□□□□ 0.46
MCF2L-208ENST00000397030 UBE2OQ9C0C9 1292 aaKnown RBP17.91■□□□□ 0.46
MCF2L-208ENST00000397030 THAP2Q9H0W7 228 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 SIK3Q9Y2K2 1263 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 MED24O75448 989 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 PLEKP08567 350 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-208ENST00000397030 USP17L7P0C7H9 530 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 OR56A5P0C7T3 313 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 E2F4Q16254 413 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 PCNX4Q63HM2 1172 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 SCARA3Q6AZY7 606 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 USP50Q70EL3 339 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-208ENST00000397030 UXS1Q8NBZ7 420 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 ADGRG1Q9Y653 693 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 GSAPA4D1B5 854 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 RGS5O15539 181 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 MLH1P40692 756 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 FMR1Q06787 632 aaKnown RBP eCLIP17.91■□□□□ 0.46
MCF2L-208ENST00000397030 CSTF3Q12996 717 aaKnown RBP17.91■□□□□ 0.46
MCF2L-208ENST00000397030 RAET1GQ6H3X3 334 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 STRA8Q7Z7C7 330 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 USP27XA6NNY8 438 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 RPLP2P05387 115 aaKnown RBP17.91■□□□□ 0.46
MCF2L-208ENST00000397030 LRRC74BQ6ZQY2 392 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 NAT16Q8N8M0 369 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 ZSWIM2Q8NEG5 633 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 E2F7Q96AV8 911 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 SMARCD1Q96GM5 515 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 GPAMQ9HCL2 828 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 ARHGEF3Q9NR81 526 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 ABCC3O15438 1527 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 A0A1W2PQC6 194 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 TRIM49D1C9J1S8 452 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 SNRPFP62306 86 aaKnown RBP17.91■□□□□ 0.46
MCF2L-208ENST00000397030 SERPINA13PQ6UXR4 307 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 C3orf67Q6ZVT6 689 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 TXNRD3Q86VQ6 643 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 BPIFA3Q9BQP9 254 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 MANSC1Q9H8J5 431 aa17.91■□□□□ 0.46
MCF2L-208ENST00000397030 IL1BP01584 269 aa17.9■□□□□ 0.46
MCF2L-208ENST00000397030 NFYCQ13952 458 aa17.9■□□□□ 0.46
MCF2L-208ENST00000397030 CCSER1Q9C0I3 900 aa17.9■□□□□ 0.46
MCF2L-208ENST00000397030 RTN3O95197 1032 aaPredicted RBP17.9■□□□□ 0.46
MCF2L-208ENST00000397030 SERPINB8P50452 374 aa17.9■□□□□ 0.46
MCF2L-208ENST00000397030 BOLA3Q53S33 107 aa17.9■□□□□ 0.46
MCF2L-208ENST00000397030 CNBD2Q96M20 576 aa17.9■□□□□ 0.46
MCF2L-208ENST00000397030 USP1O94782 785 aa17.9■□□□□ 0.46
MCF2L-208ENST00000397030 MT-CO1P00395 513 aa17.9■□□□□ 0.46
MCF2L-208ENST00000397030 NUP62P37198 522 aaPredicted RBP17.9■□□□□ 0.46
MCF2L-208ENST00000397030 ALDH5A1P51649 535 aaPredicted RBP17.9■□□□□ 0.46
MCF2L-208ENST00000397030 PRDM15P57071 1507 aaPredicted RBP17.9■□□□□ 0.46
MCF2L-208ENST00000397030 PGM5Q15124 567 aa17.9■□□□□ 0.46
MCF2L-208ENST00000397030 TRIM66O15016 1216 aa17.9■□□□□ 0.46
MCF2L-208ENST00000397030 NAB2Q15742 525 aa17.9■□□□□ 0.46
MCF2L-208ENST00000397030 AGMOQ6ZNB7 445 aa17.9■□□□□ 0.46
MCF2L-208ENST00000397030 SPATA4Q8NEY3 305 aa17.9■□□□□ 0.46
MCF2L-208ENST00000397030 ZDHHC15Q96MV8 337 aa17.9■□□□□ 0.46
MCF2L-208ENST00000397030 PPP1R10Q96QC0 940 aaKnown RBP17.9■□□□□ 0.46
MCF2L-208ENST00000397030 MTA3Q9BTC8 594 aa17.9■□□□□ 0.46
MCF2L-208ENST00000397030 ATP6V1B2P21281 511 aa17.9■□□□□ 0.46
MCF2L-208ENST00000397030 EDRF1Q3B7T1 1238 aa17.9■□□□□ 0.46
MCF2L-208ENST00000397030 MARC1Q5VT66 337 aa17.9■□□□□ 0.46
MCF2L-208ENST00000397030 BNIPLQ7Z465 357 aa17.9■□□□□ 0.46
MCF2L-208ENST00000397030 HELQQ8TDG4 1101 aa17.9■□□□□ 0.46
MCF2L-208ENST00000397030 NDRG2Q9UN36 371 aaKnown RBP17.9■□□□□ 0.46
MCF2L-208ENST00000397030 ZNF609O15014 1411 aa17.9■□□□□ 0.46
MCF2L-208ENST00000397030 RPN2P04844 631 aa17.89■□□□□ 0.46
MCF2L-208ENST00000397030 PPP2R1BP30154 601 aa17.89■□□□□ 0.46
MCF2L-208ENST00000397030 GRIK3Q13003 919 aa17.89■□□□□ 0.46
MCF2L-208ENST00000397030 CCDC144BQ3MJ40 725 aa17.89■□□□□ 0.46
MCF2L-208ENST00000397030 ZNF544Q6NX49 715 aa17.89■□□□□ 0.46
MCF2L-208ENST00000397030 ATG4AQ8WYN0 398 aa17.89■□□□□ 0.46
MCF2L-208ENST00000397030 DPF2Q92785 391 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms