RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 CYP4F11Q9HBI6 524 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 TMEM161AQ9NX61 479 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 NT5C1B-RDH14C9J2C7 533 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 ITGAVP06756 1048 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 HOXD8P13378 290 aaPredicted RBP12.32□□□□□ -0.44
ATN1-202ENST00000396684 PECAM1P16284 738 aaPredicted RBP12.32□□□□□ -0.44
ATN1-202ENST00000396684 PAMP19021 973 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 LRPAP1P30533 357 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 CDH5P33151 784 aaPredicted RBP12.32□□□□□ -0.44
ATN1-202ENST00000396684 CDKN2BP42772 138 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 KCTD19Q17RG1 926 aaPredicted RBP12.32□□□□□ -0.44
ATN1-202ENST00000396684 ANKS3Q6ZW76 656 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 SMG8Q8ND04 991 aaKnown RBP12.32□□□□□ -0.44
ATN1-202ENST00000396684 TEKT4Q8WW24 435 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 MLXIPLQ9NP71 852 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 TRPM5Q9NZQ8 1165 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 PSMC3IPQ9P2W1 217 aaPredicted RBP12.32□□□□□ -0.44
ATN1-202ENST00000396684 AP3B1O00203 1094 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 PFDN6O15212 129 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 SLC4A1P02730 911 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 FAM163BP0C2L3 166 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 NPNTQ6UXI9 565 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 SPATS2Q86XZ4 545 aaKnown RBP12.32□□□□□ -0.44
ATN1-202ENST00000396684 LRRC43Q8N309 656 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 ALLCQ8N6M5 410 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 NIPA2Q8N8Q9 360 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 RSPH1Q8WYR4 309 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 IFT43Q96FT9 208 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 NRDE2Q9H7Z3 1164 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 NUDT5Q9UKK9 219 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 PCDHB12Q9Y5F1 795 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 OR6C75A6NL08 312 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 COPEO14579 308 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 PSMD3O43242 534 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 CHRNA1P02708 482 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 RBL1P28749 1068 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 PTPN9P43378 593 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 SLC11A2P49281 568 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 TUFMP49411 452 aaKnown RBP12.31□□□□□ -0.44
ATN1-202ENST00000396684 ZNF135P52742 658 aaPredicted RBP12.31□□□□□ -0.44
ATN1-202ENST00000396684 EPHB1P54762 984 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 MREGQ8N565 214 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 EPS8L3Q8TE67 593 aaKnown RBP12.31□□□□□ -0.44
ATN1-202ENST00000396684 SERPINB12Q96P63 405 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 PCDH18Q9HCL0 1135 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 LSM7Q9UK45 103 aaKnown RBP12.31□□□□□ -0.44
ATN1-202ENST00000396684 TLK1Q9UKI8 766 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 AARSP49588 968 aaKnown RBP eCLIP12.31□□□□□ -0.441e-6■■■■□ 20.6
ATN1-202ENST00000396684 TBX4P57082 545 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 VSIG1Q86XK7 387 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 RIBC1Q8N443 379 aaPredicted RBP12.31□□□□□ -0.44
ATN1-202ENST00000396684 FBXO36Q8NEA4 188 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 HTR3CQ8WXA8 447 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 NDRG1Q92597 394 aaKnown RBP12.31□□□□□ -0.44
ATN1-202ENST00000396684 KCNN1Q92952 543 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 SCYL1Q96KG9 808 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 SLC4A5Q9BY07 1137 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 ADAM33Q9BZ11 813 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 KIF9Q9HAQ2 790 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 PRDM16Q9HAZ2 1276 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 TMBIM4Q9HC24 238 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 OLA1Q9NTK5 396 aaKnown RBP12.31□□□□□ -0.44
ATN1-202ENST00000396684 ZFATQ9P243 1243 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 NAALADL1Q9UQQ1 740 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 RIPK2O43353 540 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 SUN1O94901 812 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 OR4Q2P0C623 313 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 IRF1P10914 325 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 ETS1P14921 441 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 MDH1P40925 334 aaKnown RBP12.31□□□□□ -0.44
ATN1-202ENST00000396684 NUGGCQ68CJ6 796 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 TTC27Q6P3X3 843 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 TMEM110Q86TL2 294 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 CCDC197Q8NCU1 140 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 TRPV1Q8NER1 839 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 ZNF558Q96NG5 402 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 TRABDQ9H4I3 376 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 ADAM28Q9UKQ2 775 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 PCDHB8Q9UN66 801 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 SCN4AP35499 1836 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 EVPLQ92817 2033 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 WDR91A4D1P6 747 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 TULP2O00295 520 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 ABLIM1O14639 778 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 SOX4Q06945 474 aaPredicted RBP12.31□□□□□ -0.44
ATN1-202ENST00000396684 DPY19L2P1Q6NXN4 242 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 TRIM42Q8IWZ5 723 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 NUP93Q8N1F7 819 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 PLCD4Q9BRC7 762 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 OR12D3Q9UGF7 316 aa12.31□□□□□ -0.44
ATN1-202ENST00000396684 KIAA1217Q5T5P2 1943 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 TYMPP19971 482 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 SMAD1Q15797 465 aaKnown RBP12.3□□□□□ -0.44
ATN1-202ENST00000396684 AGMOQ6ZNB7 445 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 EP400NLQ6ZTU2 488 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 LINC01465Q8N7H1 131 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 PPP1R2P1Q96PQ5 205 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 UNC93B1Q9H1C4 597 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 ARHGAP42A6NI28 874 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 HACD1B0YJ81 288 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms