RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 TRIM42Q8IWZ5 723 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 STKLD1Q8NE28 680 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 USP13Q92995 863 aaPredicted RBP10.18□□□□□ -0.78
TRIM39-203ENST00000396547 DGCR14Q96DF8 476 aaKnown RBP10.18□□□□□ -0.78
TRIM39-203ENST00000396547 HAPLN3Q96S86 360 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 FBXO40Q9UH90 709 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 CDH22Q9UJ99 828 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 POLR2AP24928 1970 aaKnown RBP10.17□□□□□ -0.78
TRIM39-203ENST00000396547 XPO1O14980 1071 aaKnown RBP10.17□□□□□ -0.78
TRIM39-203ENST00000396547 EXTL3O43909 919 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 SIN3BO75182 1162 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 CPOXP36551 454 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 GRIA1P42261 906 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 ALDH1A3P47895 512 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 PKNOX1P55347 436 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 TMEM62Q0P6H9 643 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 PDK1Q15118 436 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 HACE1Q8IYU2 909 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 MPP5Q8N3R9 675 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 ARFGAP1Q8N6T3 406 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 DNAJC5GQ8N7S2 189 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 VCPIP1Q96JH7 1222 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 MRPL1Q9BYD6 325 aaKnown RBP10.17□□□□□ -0.78
TRIM39-203ENST00000396547 RNPEPQ9H4A4 650 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 COPS7BQ9H9Q2 264 aaPredicted RBP10.17□□□□□ -0.78
TRIM39-203ENST00000396547 GPAMQ9HCL2 828 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 HSFX1Q9UBD0 423 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 CNTNAP2Q9UHC6 1331 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 OTOFQ9HC10 1997 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 K7ERI5 159 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 DKC1O60832 514 aaKnown RBP eCLIP10.17□□□□□ -0.78
TRIM39-203ENST00000396547 SUPT3HO75486 399 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 RFPL1O75677 317 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 KRT38O76015 456 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 BPGMP07738 259 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 SLC1A6P48664 564 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 ADARP55265 1226 aaKnown RBP10.17□□□□□ -0.78
TRIM39-203ENST00000396547 CDH8P55286 799 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 PRKG1Q13976 671 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 DBN1Q16643 649 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 B3GNT6Q6ZMB0 384 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 FRMD7Q6ZUT3 714 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 TAS1R3Q7RTX0 852 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 TMC7Q7Z402 723 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 PTAR1Q7Z6K3 402 aaPredicted RBP10.17□□□□□ -0.78
TRIM39-203ENST00000396547 MICALL2Q8IY33 904 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 ADAM32Q8TC27 787 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 MIPOL1Q8TD10 442 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 C7orf26Q96N11 449 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 RMDN3Q96TC7 470 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 MTMR12Q9C0I1 747 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 CISHQ9NSE2 258 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.17□□□□□ -0.78
TRIM39-203ENST00000396547 TMCO1Q9UM00 188 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 TEX264Q9Y6I9 313 aa10.17□□□□□ -0.78
TRIM39-203ENST00000396547 A0A1B0GTW7 788 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 SDR42E2A6NKP2 422 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 TTLL13PA6NNM8 815 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 H3BSA7 217 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 VILLO15195 856 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 TBC1D12O60347 775 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 SRGAP2CP0DJJ0 459 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 SRGAP2BP0DMP2 458 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 OSBPP22059 807 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 RBL1P28749 1068 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 MIPP30301 263 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 TNFSF9P41273 254 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 YWHAZP63104 245 aaKnown RBP10.16□□□□□ -0.78
TRIM39-203ENST00000396547 TRPC3Q13507 836 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 PPM1JQ5JR12 505 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 N4BP2L1Q5TBK1 243 aaPredicted RBP10.16□□□□□ -0.78
TRIM39-203ENST00000396547 ARHGEF16Q5VV41 709 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 PDPK2PQ6A1A2 396 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 SH2D5Q6ZV89 423 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 BBS12Q6ZW61 710 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 C4orf19Q8IY42 314 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 WDTC1Q8N5D0 677 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 TTC13Q8NBP0 860 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 ZFP28Q8NHY6 868 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 PPP4R1Q8TF05 950 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 LRGUKQ96M69 825 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 FBXL18Q96ME1 805 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 ANLNQ9NQW6 1124 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 ZNF358Q9NW07 568 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 UBAP1Q9NZ09 502 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 TTLL3Q9Y4R7 772 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 ZC3H11AO75152 810 aaKnown RBP eCLIP10.16□□□□□ -0.78
TRIM39-203ENST00000396547 CSDE1O75534 798 aaKnown RBP10.16□□□□□ -0.78
TRIM39-203ENST00000396547 TMCC1O94876 653 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 KRT7P08729 469 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 DESP17661 470 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 PCSK6P29122 969 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 FDFT1P37268 417 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 ABCG1P45844 678 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 RPS6P62753 249 aaKnown RBP10.16□□□□□ -0.78
TRIM39-203ENST00000396547 KRT81Q14533 505 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 TMEM132AQ24JP5 1023 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 PTPN20Q4JDL3 420 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 CES3Q6UWW8 571 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 GSDMBQ8TAX9 411 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms