RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 FGGP02679 453 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 HNRNPA1P09651 372 aaKnown RBP eCLIP16.03■□□□□ 0.16
VAMP1-202ENST00000396308 RARAP10276 462 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 PYGMP11217 842 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 CDC25CP30307 473 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 CCR1P32246 355 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 IRS1P35568 1242 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 TUBP50607 506 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 CDH6P55285 790 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 NNTQ13423 1086 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 TFDP3Q5H9I0 405 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 HECTD3Q5T447 861 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 DCAF12L1Q5VU92 463 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 DNAJB7Q7Z6W7 309 aaPredicted RBP16.03■□□□□ 0.16
VAMP1-202ENST00000396308 FAM131BQ86XD5 332 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 CREG2Q8IUH2 290 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 LEMD2Q8NC56 503 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 ADAM32Q8TC27 787 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.03■□□□□ 0.16
VAMP1-202ENST00000396308 NTAN1Q96AB6 310 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 RNF25Q96BH1 459 aaPredicted RBP16.03■□□□□ 0.16
VAMP1-202ENST00000396308 SNRNP25Q9BV90 132 aaKnown RBP16.03■□□□□ 0.16
VAMP1-202ENST00000396308 CALN1Q9BXU9 219 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 MAK16Q9BXY0 300 aaKnown RBP16.03■□□□□ 0.16
VAMP1-202ENST00000396308 WDCPQ9H6R7 721 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 ASAH2Q9NR71 780 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 PIGVQ9NUD9 493 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 KLHL11Q9NVR0 708 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.03■□□□□ 0.16
VAMP1-202ENST00000396308 MARCH2Q9P0N8 246 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 SLC12A6Q9UHW9 1150 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 RASAL2Q9UJF2 1139 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 DENND4CQ5VZ89 1909 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 ANAPC1Q9H1A4 1944 aa16.02■□□□□ 0.16
VAMP1-202ENST00000396308 A0A1W2PPC1 479 aa16.02■□□□□ 0.16
VAMP1-202ENST00000396308 CCDC188H7C350 402 aa16.02■□□□□ 0.16
VAMP1-202ENST00000396308 KRIT1O00522 736 aa16.02■□□□□ 0.16
VAMP1-202ENST00000396308 TLR5O60602 858 aa16.02■□□□□ 0.16
VAMP1-202ENST00000396308 ZMYND10O75800 440 aa16.02■□□□□ 0.16
VAMP1-202ENST00000396308 TJP3O95049 919 aa16.02■□□□□ 0.16
VAMP1-202ENST00000396308 ZDHHC11BP0C7U3 371 aa16.02■□□□□ 0.16
VAMP1-202ENST00000396308 TCF4P15884 667 aa16.02■□□□□ 0.16
VAMP1-202ENST00000396308 HMGA1P17096 107 aaKnown RBP16.02■□□□□ 0.16
VAMP1-202ENST00000396308 TFE3P19532 575 aaPredicted RBP16.02■□□□□ 0.16
VAMP1-202ENST00000396308 IL1R2P27930 398 aa16.02■□□□□ 0.16
VAMP1-202ENST00000396308 PTPN7P35236 360 aa16.02■□□□□ 0.16
VAMP1-202ENST00000396308 ATP5C1P36542 298 aaKnown RBP16.02■□□□□ 0.16
VAMP1-202ENST00000396308 ARL4AP40617 200 aa16.02■□□□□ 0.16
VAMP1-202ENST00000396308 ZNF135P52742 658 aaPredicted RBP16.02■□□□□ 0.16
VAMP1-202ENST00000396308 EFEMP1Q12805 493 aa16.02■□□□□ 0.16
VAMP1-202ENST00000396308 PPP2R5EQ16537 467 aa16.02■□□□□ 0.16
VAMP1-202ENST00000396308 KCNT1Q5JUK3 1230 aa16.02■□□□□ 0.16
VAMP1-202ENST00000396308 SNX30Q5VWJ9 437 aa16.02■□□□□ 0.16
VAMP1-202ENST00000396308 SPOCD1Q6ZMY3 1216 aa16.02■□□□□ 0.16
VAMP1-202ENST00000396308 VSIG1Q86XK7 387 aa16.02■□□□□ 0.16
VAMP1-202ENST00000396308 ZNF276Q8N554 614 aa16.02■□□□□ 0.16
VAMP1-202ENST00000396308 ARFGAP1Q8N6T3 406 aa16.02■□□□□ 0.16
VAMP1-202ENST00000396308 MRPS31Q92665 395 aaKnown RBP16.02■□□□□ 0.16
VAMP1-202ENST00000396308 MS4A14Q96JA4 679 aa16.02■□□□□ 0.16
VAMP1-202ENST00000396308 PEBP4Q96S96 227 aa16.02■□□□□ 0.16
VAMP1-202ENST00000396308 DHX35Q9H5Z1 703 aaKnown RBP16.02■□□□□ 0.16
VAMP1-202ENST00000396308 ZDHHC7Q9NXF8 308 aa16.02■□□□□ 0.16
VAMP1-202ENST00000396308 DNMT3LQ9UJW3 386 aa16.02■□□□□ 0.16
VAMP1-202ENST00000396308 TLR6Q9Y2C9 796 aa16.02■□□□□ 0.16
VAMP1-202ENST00000396308 CLUHO75153 1309 aa16.01■□□□□ 0.15
VAMP1-202ENST00000396308 PI4K2BG5E9Z4 385 aa16.01■□□□□ 0.15
VAMP1-202ENST00000396308 H3BRJ5 948 aa16.01■□□□□ 0.15
VAMP1-202ENST00000396308 KDELR1P24390 212 aa16.01■□□□□ 0.15
VAMP1-202ENST00000396308 CXCR3P49682 368 aa16.01■□□□□ 0.15
VAMP1-202ENST00000396308 TBX4P57082 545 aa16.01■□□□□ 0.15
VAMP1-202ENST00000396308 ITIH3Q06033 890 aa16.01■□□□□ 0.15
VAMP1-202ENST00000396308 CAMK1Q14012 370 aa16.01■□□□□ 0.15
VAMP1-202ENST00000396308 TFDP2Q14188 446 aa16.01■□□□□ 0.15
VAMP1-202ENST00000396308 PPP2R5DQ14738 602 aa16.01■□□□□ 0.15
VAMP1-202ENST00000396308 PPP6R3Q5H9R7 873 aaPredicted RBP16.01■□□□□ 0.15
VAMP1-202ENST00000396308 ACBD5Q5T8D3 534 aaPredicted RBP16.01■□□□□ 0.15
VAMP1-202ENST00000396308 OTUD1Q5VV17 481 aaPredicted RBP16.01■□□□□ 0.15
VAMP1-202ENST00000396308 KLHDC10Q6PID8 442 aa16.01■□□□□ 0.15
VAMP1-202ENST00000396308 ZNF572Q7Z3I7 529 aaPredicted RBP16.01■□□□□ 0.15
VAMP1-202ENST00000396308 BNIPLQ7Z465 357 aa16.01■□□□□ 0.15
VAMP1-202ENST00000396308 SLC13A5Q86YT5 568 aaPredicted RBP16.01■□□□□ 0.15
VAMP1-202ENST00000396308 CMASQ8NFW8 434 aaPredicted RBP16.01■□□□□ 0.15
VAMP1-202ENST00000396308 CASP10Q92851 521 aa16.01■□□□□ 0.15
VAMP1-202ENST00000396308 ACSF2Q96CM8 615 aaPredicted RBP16.01■□□□□ 0.15
VAMP1-202ENST00000396308 MRPL38Q96DV4 380 aaKnown RBP16.01■□□□□ 0.15
VAMP1-202ENST00000396308 ZNF670Q9BS34 389 aa16.01■□□□□ 0.15
VAMP1-202ENST00000396308 OSBPL8Q9BZF1 889 aa16.01■□□□□ 0.15
VAMP1-202ENST00000396308 HOMER3Q9NSC5 361 aa16.01■□□□□ 0.15
VAMP1-202ENST00000396308 DZANK1Q9NVP4 752 aa16.01■□□□□ 0.15
VAMP1-202ENST00000396308 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.01■□□□□ 0.15
VAMP1-202ENST00000396308 RCOR3Q9P2K3 495 aaPredicted RBP16.01■□□□□ 0.15
VAMP1-202ENST00000396308 FZD10Q9ULW2 581 aa16.01■□□□□ 0.15
VAMP1-202ENST00000396308 EFR3BQ9Y2G0 817 aa16.01■□□□□ 0.15
VAMP1-202ENST00000396308 HBS1LQ9Y450 684 aaKnown RBP16.01■□□□□ 0.15
VAMP1-202ENST00000396308 HELZP42694 1942 aaKnown RBP16■□□□□ 0.15
VAMP1-202ENST00000396308 ZNF840PA6NDX5 716 aa16■□□□□ 0.15
VAMP1-202ENST00000396308 ZNF487B1APH4 448 aa16■□□□□ 0.15
VAMP1-202ENST00000396308 CCL16O15467 120 aa16■□□□□ 0.15
VAMP1-202ENST00000396308 IGLV3-25P01717 112 aa16■□□□□ 0.15
VAMP1-202ENST00000396308 EPCAMP16422 314 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms