RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 UBDO15205 165 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 SERPINE1P05121 402 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 EPB42P16452 691 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 RPL21P46778 160 aaKnown RBP17.82■□□□□ 0.44
UBFD1-201ENST00000395878 ZNF284Q2VY69 593 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 TUT1Q9H6E5 874 aaKnown RBP17.82■□□□□ 0.44
UBFD1-201ENST00000395878 GPRC5DQ9NZD1 345 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 FAM86B1E9PN63 330 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 FAM86B2P0C5J1 330 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 RRM2P31350 389 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 CD151P48509 253 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 PRKAA1Q13131 559 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 CCDC142Q17RM4 750 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 CASP10Q92851 521 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 PPP1R10Q96QC0 940 aaKnown RBP17.82■□□□□ 0.44
UBFD1-201ENST00000395878 SYT15Q9BQS2 421 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 VPS28Q9UK41 221 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 PNMA8BQ9ULN7 279 aaPredicted RBP17.82■□□□□ 0.44
UBFD1-201ENST00000395878 A0A1B0GW55 424 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 DDX3XO00571 662 aaKnown RBP eCLIP17.82■□□□□ 0.44
UBFD1-201ENST00000395878 PAEPP09466 180 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 DUX4L2P0CJ85 424 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 DUX4L3P0CJ86 424 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 DUX4L4P0CJ87 422 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 DUX4L5P0CJ88 424 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 DUX4L6P0CJ89 424 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 DUX4L7P0CJ90 424 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 CCR1P32246 355 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 NR2C2P49116 596 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 NDST1P52848 882 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 OAZ1P54368 228 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 CASP7P55210 303 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 SOX10P56693 466 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 ERVK-9P63128 1117 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 PLIN5Q00G26 463 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 MEA1Q16626 185 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 NT5DC3Q86UY8 548 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 SPATC1LQ9H0A9 340 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 RBM22Q9NW64 420 aaKnown RBP eCLIP17.82■□□□□ 0.446e-8■■■■■ 33.4
UBFD1-201ENST00000395878 DUX4Q9UBX2 424 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 CAB39Q9Y376 341 aaPredicted RBP17.82■□□□□ 0.44
UBFD1-201ENST00000395878 CKMP06732 381 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 PYGMP11217 842 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 MTA1Q13330 715 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 CAMK2GQ13555 558 aaPredicted RBP17.82■□□□□ 0.44
UBFD1-201ENST00000395878 TERB1Q8NA31 727 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 PCSK9Q8NBP7 692 aaKnown RBP17.82■□□□□ 0.44
UBFD1-201ENST00000395878 CERKQ8TCT0 537 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 KAT2BQ92831 832 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 CDK5RAP1Q96SZ6 601 aaKnown RBP17.82■□□□□ 0.44
UBFD1-201ENST00000395878 PRKD2Q9BZL6 878 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 C6orf203Q9P0P8 240 aaPredicted RBP17.82■□□□□ 0.44
UBFD1-201ENST00000395878 TMCC3Q9ULS5 477 aa17.82■□□□□ 0.44
UBFD1-201ENST00000395878 LZTS3O60299 673 aaPredicted RBP17.81■□□□□ 0.44
UBFD1-201ENST00000395878 PGAM1P18669 254 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 SPDYCQ5MJ68 293 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 HERC6Q8IVU3 1022 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 APOPT1Q96IL0 206 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 SIKE1Q9BRV8 207 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 TCF7L2Q9NQB0 619 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 DDX43Q9NXZ2 648 aaKnown RBP17.81■□□□□ 0.44
UBFD1-201ENST00000395878 DDX20Q9UHI6 824 aaKnown RBP17.81■□□□□ 0.44
UBFD1-201ENST00000395878 PAIP2BQ9ULR5 123 aaKnown RBP17.81■□□□□ 0.44
UBFD1-201ENST00000395878 IFNA14P01570 189 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 CHI3L1P36222 383 aaPredicted RBP17.81■□□□□ 0.44
UBFD1-201ENST00000395878 ELAVL2Q12926 359 aaKnown RBP17.81■□□□□ 0.44
UBFD1-201ENST00000395878 N4BP2L1Q5TBK1 243 aaPredicted RBP17.81■□□□□ 0.44
UBFD1-201ENST00000395878 ILDR2Q71H61 639 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 BRSK2Q8IWQ3 736 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 KYQ8NBH2 561 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 ANKRD27Q96NW4 1050 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 OSMRQ99650 979 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 GDF3Q9NR23 364 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 SPACA6W5XKT8 324 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 RARAP10276 462 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 INSRRP14616 1297 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 NME5P56597 212 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 CDC16Q13042 620 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 BFSP2Q13515 415 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 MARC1Q5VT66 337 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 DNAAF5Q86Y56 855 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 NT5DC4Q86YG4 428 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 BBS2Q9BXC9 721 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 KRCC1Q9NPI7 259 aaPredicted RBP17.81■□□□□ 0.44
UBFD1-201ENST00000395878 VTI1BQ9UEU0 232 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 POLG2Q9UHN1 485 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 TRHDEQ9UKU6 1024 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 DYRK1BQ9Y463 629 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 NPY2RP49146 381 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 ACAP1Q15027 740 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 WASHC2DQ5SRD0 308 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 TMPRSS6Q8IU80 811 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 AENQ8WTP8 325 aaKnown RBP17.81■□□□□ 0.44
UBFD1-201ENST00000395878 HTR3CQ8WXA8 447 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 VPS33AQ96AX1 596 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 C10orf88Q9H8K7 445 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 BLOC1S4Q9NUP1 217 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 SNTG2Q9NY99 539 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 USE1Q9NZ43 259 aa17.81■□□□□ 0.44
UBFD1-201ENST00000395878 NINJ2Q9NZG7 142 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms