RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 CSPG5O95196 566 aa14.24□□□□□ -0.13
VAPB-202ENST00000395802 FGGP02679 453 aa14.24□□□□□ -0.13
VAPB-202ENST00000395802 SPATA31D3P0C874 917 aa14.24□□□□□ -0.13
VAPB-202ENST00000395802 RARAP10276 462 aa14.24□□□□□ -0.13
VAPB-202ENST00000395802 PYGMP11217 842 aa14.24□□□□□ -0.13
VAPB-202ENST00000395802 CCR1P32246 355 aa14.24□□□□□ -0.13
VAPB-202ENST00000395802 IRS1P35568 1242 aa14.24□□□□□ -0.13
VAPB-202ENST00000395802 ATP5C1P36542 298 aaKnown RBP14.24□□□□□ -0.13
VAPB-202ENST00000395802 KRT81Q14533 505 aa14.24□□□□□ -0.13
VAPB-202ENST00000395802 LONRF2Q1L5Z9 754 aa14.24□□□□□ -0.13
VAPB-202ENST00000395802 TFDP3Q5H9I0 405 aa14.24□□□□□ -0.13
VAPB-202ENST00000395802 EFHC2Q5JST6 749 aa14.24□□□□□ -0.13
VAPB-202ENST00000395802 HECTD3Q5T447 861 aa14.24□□□□□ -0.13
VAPB-202ENST00000395802 SH3PXD2AQ5TCZ1 1133 aa14.24□□□□□ -0.13
VAPB-202ENST00000395802 DAB2IPQ5VWQ8 1189 aa14.24□□□□□ -0.13
VAPB-202ENST00000395802 SPATA31D4Q6ZUB0 917 aa14.24□□□□□ -0.13
VAPB-202ENST00000395802 ZNF572Q7Z3I7 529 aaPredicted RBP14.24□□□□□ -0.13
VAPB-202ENST00000395802 MAK16Q9BXY0 300 aaKnown RBP14.24□□□□□ -0.13
VAPB-202ENST00000395802 TLE6Q9H808 572 aa14.24□□□□□ -0.13
VAPB-202ENST00000395802 PRDM16Q9HAZ2 1276 aa14.24□□□□□ -0.13
VAPB-202ENST00000395802 NMUR1Q9HB89 426 aa14.24□□□□□ -0.13
VAPB-202ENST00000395802 MAN1C1Q9NR34 630 aa14.24□□□□□ -0.13
VAPB-202ENST00000395802 ZDHHC7Q9NXF8 308 aa14.24□□□□□ -0.13
VAPB-202ENST00000395802 SLC12A6Q9UHW9 1150 aa14.24□□□□□ -0.13
VAPB-202ENST00000395802 TLR6Q9Y2C9 796 aa14.24□□□□□ -0.13
VAPB-202ENST00000395802 PLXNA3P51805 1871 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 SYNJ2BP-COX16A0A087WUM0 186 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 ZNF840PA6NDX5 716 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 ZNF487B1APH4 448 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 TLR5O60602 858 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 ZMYND10O75800 440 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 IGLV3-25P01717 112 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 POU2F2P09086 479 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 SRGAP2BP0DMP2 458 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 PFKLP17858 780 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 CDC25CP30307 473 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 PTPN7P35236 360 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 MARCKSL1P49006 195 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 CXCR3P49682 368 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 PPP2R5DQ14738 602 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 SMTNL2Q2TAL5 461 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 KCNT1Q5JUK3 1230 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 C10orf120Q5SQS8 335 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 CHRDL2Q6WN34 429 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 SPRED2Q7Z698 418 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 TAC4Q86UU9 113 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 ANKRD7Q92527 254 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 HSPH1Q92598 858 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 ASAH2Q9NR71 780 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 HOMER3Q9NSC5 361 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.23□□□□□ -0.13
VAPB-202ENST00000395802 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.23□□□□□ -0.13
VAPB-202ENST00000395802 COX16Q9P0S2 106 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 DNMT3LQ9UJW3 386 aa14.23□□□□□ -0.13
VAPB-202ENST00000395802 CCDC188H7C350 402 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 IRAK2O43187 625 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 KDELR1P24390 212 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 IL1R2P27930 398 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 MLLT1Q03111 559 aaPredicted RBP14.22□□□□□ -0.13
VAPB-202ENST00000395802 SCAPQ12770 1279 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 DPYSL2Q16555 572 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 TEX35Q5T0J7 233 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 DCAF12L1Q5VU92 463 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 CCDC70Q6NSX1 233 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 FAM131BQ86XD5 332 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 CPNE8Q86YQ8 564 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 MRPL38Q96DV4 380 aaKnown RBP14.22□□□□□ -0.13
VAPB-202ENST00000395802 OSBPL8Q9BZF1 889 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 PIGVQ9NUD9 493 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 RCOR3Q9P2K3 495 aaPredicted RBP14.22□□□□□ -0.13
VAPB-202ENST00000395802 ZMYM5Q9UJ78 669 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 AP4E1Q9UPM8 1137 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 MYO16Q9Y6X6 1858 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 TMEM265A0A087WTH1 108 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 SOBPA7XYQ1 873 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 APOEP02649 317 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 ADRA1BP35368 520 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 ARL4AP40617 200 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 CDH6P55285 790 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 COG7P83436 770 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 ZNF211Q13398 564 aaPredicted RBP14.22□□□□□ -0.13
VAPB-202ENST00000395802 LRIT3Q3SXY7 679 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 SLC13A5Q86YT5 568 aaPredicted RBP14.22□□□□□ -0.13
VAPB-202ENST00000395802 ADAM32Q8TC27 787 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 SLC22A17Q8WUG5 538 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 MRPS31Q92665 395 aaKnown RBP14.22□□□□□ -0.13
VAPB-202ENST00000395802 RNF25Q96BH1 459 aaPredicted RBP14.22□□□□□ -0.13
VAPB-202ENST00000395802 ZNF670Q9BS34 389 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 PRO3102Q9H379 93 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 WDR6Q9NNW5 1121 aaKnown RBP14.22□□□□□ -0.13
VAPB-202ENST00000395802 OSER1Q9NX31 292 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 MARCH2Q9P0N8 246 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 FZD10Q9ULW2 581 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 HBS1LQ9Y450 684 aaKnown RBP14.22□□□□□ -0.13
VAPB-202ENST00000395802 GREB1Q4ZG55 1949 aa14.22□□□□□ -0.13
VAPB-202ENST00000395802 LAMA3Q16787 3333 aa14.21□□□□□ -0.13
VAPB-202ENST00000395802 PDE4DIPQ5VU43 2346 aa14.21□□□□□ -0.13
VAPB-202ENST00000395802 KRIT1O00522 736 aa14.21□□□□□ -0.13
VAPB-202ENST00000395802 TCF4P15884 667 aa14.21□□□□□ -0.13
VAPB-202ENST00000395802 PTPN2P17706 415 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms