RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 GEN1Q17RS7 908 aa16.69■□□□□ 0.26
SNCA-205ENST00000394991 XXYLT1Q8NBI6 393 aa16.69■□□□□ 0.26
SNCA-205ENST00000394991 ADAM32Q8TC27 787 aa16.69■□□□□ 0.26
SNCA-205ENST00000394991 SLC2A14Q8TDB8 520 aa16.69■□□□□ 0.26
SNCA-205ENST00000394991 TNIP3Q96KP6 325 aa16.69■□□□□ 0.26
SNCA-205ENST00000394991 NMUR1Q9HB89 426 aa16.69■□□□□ 0.26
SNCA-205ENST00000394991 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.69■□□□□ 0.262e-6■■■■■ 149.1
SNCA-205ENST00000394991 THAP10Q9P2Z0 257 aaPredicted RBP16.69■□□□□ 0.26
SNCA-205ENST00000394991 HMGXB4Q9UGU5 601 aa16.69■□□□□ 0.26
SNCA-205ENST00000394991 EIF2B4Q9UI10 523 aaKnown RBP16.69■□□□□ 0.26
SNCA-205ENST00000394991 NUDT5Q9UKK9 219 aa16.69■□□□□ 0.26
SNCA-205ENST00000394991 SLC27A6Q9Y2P4 619 aa16.69■□□□□ 0.26
SNCA-205ENST00000394991 PLXNA2O75051 1894 aa16.68■□□□□ 0.26
SNCA-205ENST00000394991 A0A1B0GVT2 93 aa16.68■□□□□ 0.26
SNCA-205ENST00000394991 GOLGA8CPA6NN73 597 aa16.68■□□□□ 0.26
SNCA-205ENST00000394991 FLRT2O43155 660 aa16.68■□□□□ 0.26
SNCA-205ENST00000394991 CYP26A1O43174 497 aa16.68■□□□□ 0.26
SNCA-205ENST00000394991 IGLV3-19P01714 112 aa16.68■□□□□ 0.26
SNCA-205ENST00000394991 ACO1P21399 889 aaKnown RBP16.68■□□□□ 0.26
SNCA-205ENST00000394991 MFAP3P55082 362 aa16.68■□□□□ 0.26
SNCA-205ENST00000394991 ZNF699Q32M78 642 aa16.68■□□□□ 0.26
SNCA-205ENST00000394991 ZNF667Q5HYK9 610 aa16.68■□□□□ 0.26
SNCA-205ENST00000394991 CACUL1Q86Y37 369 aa16.68■□□□□ 0.26
SNCA-205ENST00000394991 TMPRSS6Q8IU80 811 aa16.68■□□□□ 0.26
SNCA-205ENST00000394991 NELFCDQ8IXH7 590 aa16.68■□□□□ 0.26
SNCA-205ENST00000394991 RHBDD1Q8TEB9 315 aa16.68■□□□□ 0.26
SNCA-205ENST00000394991 CDC6Q99741 560 aa16.68■□□□□ 0.26
SNCA-205ENST00000394991 TNMDQ9H2S6 317 aa16.68■□□□□ 0.26
SNCA-205ENST00000394991 FBXO44Q9H4M3 255 aa16.68■□□□□ 0.26
SNCA-205ENST00000394991 SCML2Q9UQR0 700 aa16.68■□□□□ 0.26
SNCA-205ENST00000394991 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.68■□□□□ 0.26
SNCA-205ENST00000394991 PCDHGB2Q9Y5G2 931 aa16.68■□□□□ 0.26
SNCA-205ENST00000394991 MYLKQ15746 1914 aa16.68■□□□□ 0.26
SNCA-205ENST00000394991 A0A087WV48 116 aa16.67■□□□□ 0.26
SNCA-205ENST00000394991 FAM149AA5PLN7 773 aa16.67■□□□□ 0.26
SNCA-205ENST00000394991 HHLA1C9JL84 531 aa16.67■□□□□ 0.26
SNCA-205ENST00000394991 PHACTR2O75167 634 aa16.67■□□□□ 0.26
SNCA-205ENST00000394991 STC2O76061 302 aa16.67■□□□□ 0.26
SNCA-205ENST00000394991 VNN1O95497 513 aa16.67■□□□□ 0.26
SNCA-205ENST00000394991 PENKP01210 267 aaPredicted RBP16.67■□□□□ 0.26
SNCA-205ENST00000394991 COPAP53621 1224 aa16.67■□□□□ 0.26
SNCA-205ENST00000394991 GOLGA8FQ08AF8 430 aa16.67■□□□□ 0.26
SNCA-205ENST00000394991 GOLGA8DPQ0D2H9 430 aa16.67■□□□□ 0.26
SNCA-205ENST00000394991 FAM26FQ5R3K3 315 aa16.67■□□□□ 0.26
SNCA-205ENST00000394991 FYB2Q5VWT5 728 aa16.67■□□□□ 0.26
SNCA-205ENST00000394991 IL27RAQ6UWB1 636 aa16.67■□□□□ 0.26
SNCA-205ENST00000394991 RBBP8NLQ8NC74 664 aaPredicted RBP16.67■□□□□ 0.26
SNCA-205ENST00000394991 SIPA1Q96FS4 1042 aa16.67■□□□□ 0.26
SNCA-205ENST00000394991 FAM49BQ9NUQ9 324 aa16.67■□□□□ 0.26
SNCA-205ENST00000394991 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.67■□□□□ 0.26
SNCA-205ENST00000394991 KBTBD4Q9NVX7 518 aa16.67■□□□□ 0.26
SNCA-205ENST00000394991 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.67■□□□□ 0.26
SNCA-205ENST00000394991 A0A1W2PQH9 124 aa16.66■□□□□ 0.26
SNCA-205ENST00000394991 EIF4E1BA6NMX2 242 aaKnown RBP16.66■□□□□ 0.26
SNCA-205ENST00000394991 KLKB1P03952 638 aa16.66■□□□□ 0.26
SNCA-205ENST00000394991 PRKCHP24723 683 aa16.66■□□□□ 0.26
SNCA-205ENST00000394991 OXTRP30559 389 aa16.66■□□□□ 0.26
SNCA-205ENST00000394991 CSNK1EP49674 416 aaKnown RBP16.66■□□□□ 0.26
SNCA-205ENST00000394991 NDST1P52848 882 aa16.66■□□□□ 0.26
SNCA-205ENST00000394991 ASIC1P78348 528 aa16.66■□□□□ 0.26
SNCA-205ENST00000394991 BIRC3Q13489 604 aa16.66■□□□□ 0.26
SNCA-205ENST00000394991 ZNF234Q14588 700 aa16.66■□□□□ 0.26
SNCA-205ENST00000394991 E2F4Q16254 413 aa16.66■□□□□ 0.26
SNCA-205ENST00000394991 KLHDC10Q6PID8 442 aa16.66■□□□□ 0.26
SNCA-205ENST00000394991 SCUBE3Q8IX30 993 aa16.66■□□□□ 0.26
SNCA-205ENST00000394991 C12orf29Q8N999 325 aa16.66■□□□□ 0.26
SNCA-205ENST00000394991 PRCCQ92733 491 aaPredicted RBP16.66■□□□□ 0.26
SNCA-205ENST00000394991 COL26A1Q96A83 441 aa16.66■□□□□ 0.26
SNCA-205ENST00000394991 JAKMIP2Q96AA8 810 aa16.66■□□□□ 0.26
SNCA-205ENST00000394991 USP28Q96RU2 1077 aa16.66■□□□□ 0.26
SNCA-205ENST00000394991 SNX11Q9Y5W9 270 aa16.66■□□□□ 0.26
SNCA-205ENST00000394991 MORC2Q9Y6X9 1032 aaPredicted RBP16.66■□□□□ 0.26
SNCA-205ENST00000394991 UBE4BO95155 1302 aa16.66■□□□□ 0.26
SNCA-205ENST00000394991 LRRIQ3A6PVS8 624 aaPredicted RBP16.65■□□□□ 0.26
SNCA-205ENST00000394991 NPC1O15118 1278 aa16.65■□□□□ 0.26
SNCA-205ENST00000394991 CLSTN1O94985 981 aa16.65■□□□□ 0.26
SNCA-205ENST00000394991 C4BPAP04003 597 aaKnown RBP16.65■□□□□ 0.26
SNCA-205ENST00000394991 PRB1P04280 392 aa16.65■□□□□ 0.26
SNCA-205ENST00000394991 RARGP13631 454 aa16.65■□□□□ 0.26
SNCA-205ENST00000394991 ADORA2BP29275 332 aa16.65■□□□□ 0.26
SNCA-205ENST00000394991 PLA2G4AP47712 749 aa16.65■□□□□ 0.26
SNCA-205ENST00000394991 ZNF132P52740 706 aa16.65■□□□□ 0.26
SNCA-205ENST00000394991 EHHADHQ08426 723 aa16.65■□□□□ 0.26
SNCA-205ENST00000394991 NCOA4Q13772 614 aa16.65■□□□□ 0.26
SNCA-205ENST00000394991 SLC39A14Q15043 492 aa16.65■□□□□ 0.26
SNCA-205ENST00000394991 PTPRNQ16849 979 aa16.65■□□□□ 0.26
SNCA-205ENST00000394991 BMT2Q1RMZ1 405 aa16.65■□□□□ 0.26
SNCA-205ENST00000394991 KIF19Q2TAC6 998 aa16.65■□□□□ 0.26
SNCA-205ENST00000394991 CLEC20AQ6ZU45 233 aa16.65■□□□□ 0.26
SNCA-205ENST00000394991 SCD5Q86SK9 330 aa16.65■□□□□ 0.26
SNCA-205ENST00000394991 FAM124AQ86V42 546 aa16.65■□□□□ 0.26
SNCA-205ENST00000394991 C12orf56Q8IXR9 622 aa16.65■□□□□ 0.26
SNCA-205ENST00000394991 CRYBG2Q8N1P7 616 aa16.65■□□□□ 0.26
SNCA-205ENST00000394991 GALNT15Q8N3T1 639 aa16.65■□□□□ 0.26
SNCA-205ENST00000394991 SORCS1Q8WY21 1168 aa16.65■□□□□ 0.26
SNCA-205ENST00000394991 PIWIL1Q96J94 861 aaKnown RBP16.65■□□□□ 0.26
SNCA-205ENST00000394991 NUP58Q9BVL2 599 aa16.65■□□□□ 0.26
SNCA-205ENST00000394991 C6orf106Q9H6K1 298 aaPredicted RBP16.65■□□□□ 0.26
SNCA-205ENST00000394991 UPF2Q9HAU5 1272 aaKnown RBP16.65■□□□□ 0.26
SNCA-205ENST00000394991 DNMT3LQ9UJW3 386 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms