RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 SOCS4Q8WXH5 440 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 NSRP1Q9H0G5 558 aaKnown RBP14.48□□□□□ -0.09
SNCA-204ENST00000394989 KDM4CQ9H3R0 1056 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 TMPRSS4Q9NRS4 437 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.48□□□□□ -0.09
SNCA-204ENST00000394989 PAK5Q9P286 719 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 TSC2P49815 1807 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 KBTBD13C9JR72 458 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 CYB561D2O14569 222 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 ZBED1O96006 694 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 MLH1P40692 756 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 MATKP42679 507 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 SLC18A1P54219 525 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 MRPS6P82932 125 aaKnown RBP14.48□□□□□ -0.09
SNCA-204ENST00000394989 GDF6Q6KF10 455 aaPredicted RBP14.48□□□□□ -0.09
SNCA-204ENST00000394989 TAF2Q6P1X5 1199 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 CXCL17Q6UXB2 119 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 SAPCD2Q86UD0 394 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 FAM131BQ86XD5 332 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 SPDL1Q96EA4 605 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 PLAC1Q9HBJ0 212 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 TCRBV9S1A1TA0A576 114 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 DUSP11O75319 330 aaKnown RBP14.47□□□□□ -0.09
SNCA-204ENST00000394989 C1QAP02745 245 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 GOT1P17174 413 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 PTPN1P18031 435 aaKnown RBP14.47□□□□□ -0.09
SNCA-204ENST00000394989 RABGGTBP53611 331 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 CBLBQ13191 982 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 CRHR2Q13324 411 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 NCBP2-AS2Q69YL0 99 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 CLEC20AQ6ZU45 233 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 STRADAQ7RTN6 431 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 CAND1Q86VP6 1230 aaKnown RBP14.47□□□□□ -0.09
SNCA-204ENST00000394989 C3orf58Q8NDZ4 430 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 SPOCK2Q92563 424 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 SMC6Q96SB8 1091 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 MIOSQ9NXC5 875 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 ST3GAL5Q9UNP4 418 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 NR2E3Q9Y5X4 410 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 CHRNA1P02708 482 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 RARBP10826 455 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 NPR3P17342 541 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 KRT4P19013 534 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 YWHAZP63104 245 aaKnown RBP14.47□□□□□ -0.09
SNCA-204ENST00000394989 SLC1A5Q15758 541 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 NBPF20Q3BBV1 942 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 GNASQ5JWF2 1037 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 BNIPLQ7Z465 357 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 MICAL1Q8TDZ2 1067 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 LPPQ93052 612 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 TSPYL2Q9H2G4 693 aaPredicted RBP14.47□□□□□ -0.09
SNCA-204ENST00000394989 ETNK1Q9HBU6 452 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 ABCF3Q9NUQ8 709 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 SENP1Q9P0U3 644 aa14.47□□□□□ -0.09
SNCA-204ENST00000394989 METTL18O95568 372 aa14.46□□□□□ -0.09
SNCA-204ENST00000394989 PGK1P00558 417 aa14.46□□□□□ -0.09
SNCA-204ENST00000394989 DESP17661 470 aa14.46□□□□□ -0.09
SNCA-204ENST00000394989 SLC25A52Q3SY17 297 aa14.46□□□□□ -0.09
SNCA-204ENST00000394989 EFHC1Q5JVL4 640 aa14.46□□□□□ -0.09
SNCA-204ENST00000394989 NSMCE1Q8WV22 266 aa14.46□□□□□ -0.09
SNCA-204ENST00000394989 NT5C3BQ969T7 300 aa14.46□□□□□ -0.09
SNCA-204ENST00000394989 GAD1Q99259 594 aa14.46□□□□□ -0.09
SNCA-204ENST00000394989 CRTAC1Q9NQ79 661 aa14.46□□□□□ -0.09
SNCA-204ENST00000394989 FAM105AQ9NUU6 356 aa14.46□□□□□ -0.09
SNCA-204ENST00000394989 DTLQ9NZJ0 730 aa14.46□□□□□ -0.09
SNCA-204ENST00000394989 USP15Q9Y4E8 981 aaPredicted RBP14.46□□□□□ -0.09
SNCA-204ENST00000394989 CFAP69A5D8W1 941 aa14.46□□□□□ -0.09
SNCA-204ENST00000394989 CTSHP09668 335 aa14.46□□□□□ -0.09
SNCA-204ENST00000394989 MAGEA6P43360 314 aa14.46□□□□□ -0.09
SNCA-204ENST00000394989 CLCNKBP51801 687 aa14.46□□□□□ -0.09
SNCA-204ENST00000394989 MRPS5P82675 430 aaKnown RBP14.46□□□□□ -0.09
SNCA-204ENST00000394989 KLHL38Q2WGJ6 581 aa14.46□□□□□ -0.09
SNCA-204ENST00000394989 MDH1BQ5I0G3 518 aa14.46□□□□□ -0.09
SNCA-204ENST00000394989 KCNT2Q6UVM3 1135 aa14.46□□□□□ -0.09
SNCA-204ENST00000394989 FAM149B1Q96BN6 582 aa14.46□□□□□ -0.09
SNCA-204ENST00000394989 PAIP2Q9BPZ3 127 aaKnown RBP14.46□□□□□ -0.09
SNCA-204ENST00000394989 TMEM30AQ9NV96 361 aa14.46□□□□□ -0.09
SNCA-204ENST00000394989 PRKAG3Q9UGI9 489 aa14.46□□□□□ -0.09
SNCA-204ENST00000394989 FZD10Q9ULW2 581 aa14.46□□□□□ -0.09
SNCA-204ENST00000394989 SMG5Q9UPR3 1016 aaKnown RBP14.46□□□□□ -0.09
SNCA-204ENST00000394989 APRTP07741 180 aa14.46□□□□□ -0.1
SNCA-204ENST00000394989 AMPD1P23109 780 aa14.46□□□□□ -0.1
SNCA-204ENST00000394989 SULT1E1P49888 294 aa14.46□□□□□ -0.1
SNCA-204ENST00000394989 IL9RQ01113 521 aa14.46□□□□□ -0.1
SNCA-204ENST00000394989 KBTBD12Q3ZCT8 623 aa14.46□□□□□ -0.1
SNCA-204ENST00000394989 DCAF6Q58WW2 860 aa14.46□□□□□ -0.1
SNCA-204ENST00000394989 SLC45A4Q5BKX6 768 aa14.46□□□□□ -0.1
SNCA-204ENST00000394989 SYPL2Q5VXT5 272 aa14.46□□□□□ -0.1
SNCA-204ENST00000394989 HFE2Q6ZVN8 426 aa14.46□□□□□ -0.1
SNCA-204ENST00000394989 ZNF534Q76KX8 674 aa14.46□□□□□ -0.1
SNCA-204ENST00000394989 TRPM8Q7Z2W7 1104 aa14.46□□□□□ -0.1
SNCA-204ENST00000394989 PRPF39Q86UA1 669 aaKnown RBP14.46□□□□□ -0.1
SNCA-204ENST00000394989 RNF169Q8NCN4 708 aa14.46□□□□□ -0.1
SNCA-204ENST00000394989 PLCD4Q9BRC7 762 aa14.46□□□□□ -0.1
SNCA-204ENST00000394989 ARHGAP39Q9C0H5 1083 aa14.46□□□□□ -0.1
SNCA-204ENST00000394989 EME2A4GXA9 379 aaPredicted RBP14.45□□□□□ -0.1
SNCA-204ENST00000394989 CYBAP13498 195 aa14.45□□□□□ -0.1
SNCA-204ENST00000394989 TSHRP16473 764 aa14.45□□□□□ -0.1
SNCA-204ENST00000394989 CA4P22748 312 aa14.45□□□□□ -0.1
SNCA-204ENST00000394989 GJA9P57773 515 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms