RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 KIAA1211LQ6NV74 962 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 GJB7Q6PEY0 223 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 TMEM270Q6UE05 265 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 CCDC150Q8NCX0 1101 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 TSTD1Q8NFU3 115 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 CLEC4CQ8WTT0 213 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 BHMTQ93088 406 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 ACDQ96AP0 544 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 ERLEC1Q96DZ1 483 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 MYEOVQ96EZ4 313 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 CCDC34Q96HJ3 373 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 CNOT6LQ96LI5 555 aaKnown RBP9.29□□□□□ -0.92
ATG4A-205ENST00000394892 NACA2Q9H009 215 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 INTS2Q9H0H0 1204 aaKnown RBP9.29□□□□□ -0.92
ATG4A-205ENST00000394892 FAM124BQ9H5Z6 455 aaPredicted RBP9.29□□□□□ -0.92
ATG4A-205ENST00000394892 CD93Q9NPY3 652 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 DNAJC17Q9NVM6 304 aaKnown RBP9.29□□□□□ -0.92
ATG4A-205ENST00000394892 KIAA1468Q9P260 1216 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 DEC1Q9P2X7 70 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 CYTH4Q9UIA0 394 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 RASAL2Q9UJF2 1139 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 AJAP1Q9UKB5 411 aaPredicted RBP9.29□□□□□ -0.92
ATG4A-205ENST00000394892 CNTN6Q9UQ52 1028 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 STARD13Q9Y3M8 1113 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 ZNF638Q14966 1978 aaKnown RBP9.28□□□□□ -0.92
ATG4A-205ENST00000394892 SDK1Q7Z5N4 2213 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 SPTBN2O15020 2390 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 SLC12A8A0AV02 714 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 TBC1D3BA6NDS4 549 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 BECN2A8MW95 431 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 P4HA2O15460 535 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 MSI1O43347 362 aaKnown RBP9.28□□□□□ -0.92
ATG4A-205ENST00000394892 PAEPP09466 180 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 CORO1AP31146 461 aaKnown RBP9.28□□□□□ -0.92
ATG4A-205ENST00000394892 MPLP40238 635 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 P2RY2P41231 377 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 RPL34P49207 117 aaKnown RBP9.28□□□□□ -0.92
ATG4A-205ENST00000394892 SGSHP51688 502 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 BCAT1P54687 386 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 DAOAP59103 153 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 UBE2HP62256 183 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 ADIGQ0VDE8 80 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 BST2Q10589 180 aaKnown RBP9.28□□□□□ -0.92
ATG4A-205ENST00000394892 TRIP4Q15650 581 aaPredicted RBP9.28□□□□□ -0.92
ATG4A-205ENST00000394892 CNGA2Q16280 664 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 C10orf76Q5T2E6 689 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 DAB2IPQ5VWQ8 1189 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 BSPRYQ5W0U4 402 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 TMEM215Q68D42 235 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 RNF43Q68DV7 783 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 DENND1BQ6P3S1 775 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 FAM217AQ8IXS0 508 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 PPM1KQ8N3J5 372 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 TTC39CQ8N584 583 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 CCDC26Q8TAB7 109 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 KCTD13Q8WZ19 329 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 EDEM1Q92611 657 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 PIWIL1Q96J94 861 aaKnown RBP9.28□□□□□ -0.92
ATG4A-205ENST00000394892 NT5C1BQ96P26 610 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 LSM14BQ9BX40 385 aaKnown RBP9.28□□□□□ -0.92
ATG4A-205ENST00000394892 BBS2Q9BXC9 721 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 GTPBP4Q9BZE4 634 aaKnown RBP9.28□□□□□ -0.92
ATG4A-205ENST00000394892 SLC6A17Q9H1V8 727 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 MARCH2Q9P0N8 246 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 SFMBT1Q9UHJ3 866 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 HOOK1Q9UJC3 728 aaKnown RBP9.28□□□□□ -0.92
ATG4A-205ENST00000394892 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.28□□□□□ -0.92
ATG4A-205ENST00000394892 PCDHB4Q9Y5E5 795 aa9.28□□□□□ -0.92
ATG4A-205ENST00000394892 KMT2BQ9UMN6 2715 aaPredicted RBP9.27□□□□□ -0.92
ATG4A-205ENST00000394892 HELZP42694 1942 aaKnown RBP9.27□□□□□ -0.93
ATG4A-205ENST00000394892 BCLAF3A2AJT9 711 aaKnown RBP9.27□□□□□ -0.93
ATG4A-205ENST00000394892 PATE3B3GLJ2 98 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 KCNK5O95279 499 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 PROS1P07225 676 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 RALAP11233 206 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 GABRG2P18507 467 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 SLC9A1P19634 815 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 TBXAS1P24557 533 aaPredicted RBP9.27□□□□□ -0.93
ATG4A-205ENST00000394892 GPD2P43304 727 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 PSEN1P49768 467 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 MFAP3P55082 362 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 GCNT1Q02742 428 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 STIM1Q13586 685 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 GEN1Q17RS7 908 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 PMS2CLQ68D20 193 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 GRAMD4Q6IC98 578 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 C11orf74Q86VG3 221 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 DENND1CQ8IV53 801 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 FMNL3Q8IVF7 1028 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 SCML4Q8N228 414 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 PIP4P2Q8N4L2 257 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 WDTC1Q8N5D0 677 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 ZNF513Q8N8E2 541 aaPredicted RBP9.27□□□□□ -0.93
ATG4A-205ENST00000394892 HMGB4Q8WW32 186 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 CRACR2AQ9BSW2 395 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 SIX2Q9NPC8 291 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 CACNA2D2Q9NY47 1150 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 CHMP5Q9NZZ3 219 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 TJP2Q9UDY2 1190 aa9.27□□□□□ -0.93
ATG4A-205ENST00000394892 RWDD2AQ9UIY3 292 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms