RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 ZCCHC9Q8N567 271 aaKnown RBP15.54■□□□□ 0.08
CCT4-201ENST00000394440 FUBP3Q96I24 572 aaKnown RBP eCLIP15.54■□□□□ 0.08
CCT4-201ENST00000394440 ZNF333Q96JL9 665 aa15.54■□□□□ 0.08
CCT4-201ENST00000394440 MRPL9Q9BYD2 267 aaKnown RBP15.54■□□□□ 0.08
CCT4-201ENST00000394440 GPR62Q9BZJ7 368 aa15.54■□□□□ 0.08
CCT4-201ENST00000394440 LRRC4CQ9HCJ2 640 aa15.54■□□□□ 0.08
CCT4-201ENST00000394440 GOLGA6AQ9NYA3 693 aa15.54■□□□□ 0.08
CCT4-201ENST00000394440 FARP1Q9Y4F1 1045 aaPredicted RBP15.54■□□□□ 0.08
CCT4-201ENST00000394440 CAPN9O14815 690 aa15.53■□□□□ 0.08
CCT4-201ENST00000394440 NCAM1P13591 858 aa15.53■□□□□ 0.08
CCT4-201ENST00000394440 FGFR3P22607 806 aa15.53■□□□□ 0.08
CCT4-201ENST00000394440 STIP1P31948 543 aaKnown RBP15.53■□□□□ 0.08
CCT4-201ENST00000394440 RPL22P35268 128 aaKnown RBP15.53■□□□□ 0.08
CCT4-201ENST00000394440 AIF1P55008 147 aa15.53■□□□□ 0.08
CCT4-201ENST00000394440 ROR1Q01973 937 aa15.53■□□□□ 0.08
CCT4-201ENST00000394440 SLC29A2Q14542 456 aa15.53■□□□□ 0.08
CCT4-201ENST00000394440 MORF4L2Q15014 288 aa15.53■□□□□ 0.08
CCT4-201ENST00000394440 DENND2CQ68D51 928 aa15.53■□□□□ 0.08
CCT4-201ENST00000394440 C1orf228Q6PIY5 440 aa15.53■□□□□ 0.08
CCT4-201ENST00000394440 CCDC25Q86WR0 208 aa15.53■□□□□ 0.08
CCT4-201ENST00000394440 DCP1BQ8IZD4 617 aaKnown RBP15.53■□□□□ 0.08
CCT4-201ENST00000394440 SLC7A14Q8TBB6 771 aa15.53■□□□□ 0.08
CCT4-201ENST00000394440 RSAD2Q8WXG1 361 aa15.53■□□□□ 0.08
CCT4-201ENST00000394440 VWCEQ96DN2 955 aa15.53■□□□□ 0.08
CCT4-201ENST00000394440 RTP4Q96DX8 246 aa15.53■□□□□ 0.08
CCT4-201ENST00000394440 PWWP2AQ96N64 755 aa15.53■□□□□ 0.08
CCT4-201ENST00000394440 TMEM175Q9BSA9 504 aa15.53■□□□□ 0.08
CCT4-201ENST00000394440 USP29Q9HBJ7 922 aa15.53■□□□□ 0.08
CCT4-201ENST00000394440 SHOC2Q9UQ13 582 aa15.53■□□□□ 0.08
CCT4-201ENST00000394440 I6L893 689 aaPredicted RBP15.53■□□□□ 0.08
CCT4-201ENST00000394440 SHBGP04278 402 aa15.53■□□□□ 0.08
CCT4-201ENST00000394440 CYP2C18P33260 490 aa15.53■□□□□ 0.08
CCT4-201ENST00000394440 SLC5A3P53794 718 aa15.53■□□□□ 0.08
CCT4-201ENST00000394440 ZC3H18Q86VM9 953 aaKnown RBP15.53■□□□□ 0.08
CCT4-201ENST00000394440 SCAMP5Q8TAC9 235 aa15.53■□□□□ 0.08
CCT4-201ENST00000394440 DIS3LQ8TF46 1054 aaKnown RBP15.53■□□□□ 0.08
CCT4-201ENST00000394440 EXOC4Q96A65 974 aa15.53■□□□□ 0.08
CCT4-201ENST00000394440 ATP6V1G3Q96LB4 118 aa15.53■□□□□ 0.08
CCT4-201ENST00000394440 TMPRSS4Q9NRS4 437 aa15.53■□□□□ 0.08
CCT4-201ENST00000394440 NDC80O14777 642 aa15.52■□□□□ 0.08
CCT4-201ENST00000394440 ZFXP17010 805 aaPredicted RBP15.52■□□□□ 0.08
CCT4-201ENST00000394440 GOT1P17174 413 aa15.52■□□□□ 0.08
CCT4-201ENST00000394440 NME3Q13232 169 aa15.52■□□□□ 0.08
CCT4-201ENST00000394440 NFE2Q16621 373 aaPredicted RBP15.52■□□□□ 0.08
CCT4-201ENST00000394440 BSPRYQ5W0U4 402 aa15.52■□□□□ 0.08
CCT4-201ENST00000394440 NCBP2-AS2Q69YL0 99 aa15.52■□□□□ 0.08
CCT4-201ENST00000394440 FAM71DQ8N9W8 422 aa15.52■□□□□ 0.08
CCT4-201ENST00000394440 PRCCQ92733 491 aaPredicted RBP15.52■□□□□ 0.08
CCT4-201ENST00000394440 COLEC11Q9BWP8 271 aa15.52■□□□□ 0.08
CCT4-201ENST00000394440 PRDM16Q9HAZ2 1276 aa15.52■□□□□ 0.08
CCT4-201ENST00000394440 ANLNQ9NQW6 1124 aa15.52■□□□□ 0.08
CCT4-201ENST00000394440 BCLAF3A2AJT9 711 aaKnown RBP15.52■□□□□ 0.07
CCT4-201ENST00000394440 IGLV3-25P01717 112 aa15.52■□□□□ 0.07
CCT4-201ENST00000394440 ALDH2P05091 517 aa15.52■□□□□ 0.07
CCT4-201ENST00000394440 GALTP07902 379 aa15.52■□□□□ 0.07
CCT4-201ENST00000394440 ADRA1BP35368 520 aa15.52■□□□□ 0.07
CCT4-201ENST00000394440 SLC10A2Q12908 348 aaPredicted RBP15.52■□□□□ 0.07
CCT4-201ENST00000394440 SEMA3BQ13214 749 aa15.52■□□□□ 0.07
CCT4-201ENST00000394440 EIF4EBP2Q13542 120 aaPredicted RBP15.52■□□□□ 0.07
CCT4-201ENST00000394440 FAM171A1Q5VUB5 890 aa15.52■□□□□ 0.07
CCT4-201ENST00000394440 FUT10Q6P4F1 479 aa15.52■□□□□ 0.07
CCT4-201ENST00000394440 ADAM32Q8TC27 787 aa15.52■□□□□ 0.07
CCT4-201ENST00000394440 RNF139Q8WU17 664 aa15.52■□□□□ 0.07
CCT4-201ENST00000394440 CPT1BQ92523 772 aa15.52■□□□□ 0.07
CCT4-201ENST00000394440 TMEM109Q9BVC6 243 aa15.52■□□□□ 0.07
CCT4-201ENST00000394440 ARHGEF4Q9NR80 690 aa15.52■□□□□ 0.07
CCT4-201ENST00000394440 HEY1Q9Y5J3 304 aa15.52■□□□□ 0.07
CCT4-201ENST00000394440 SF3B1O75533 1304 aaKnown RBP eCLIP15.51■□□□□ 0.077e-6■■■■■ 33.4
CCT4-201ENST00000394440 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.51■□□□□ 0.07
CCT4-201ENST00000394440 SYNJ2BP-COX16A0A087WUM0 186 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 CFAP69A5D8W1 941 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 TBKBP1A7MCY6 615 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 AMHP03971 560 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 MYZAPP0CAP1 466 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 ARL4AP40617 200 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 NR2C2P49116 596 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 GBE1Q04446 702 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 DARS2Q6PI48 645 aaKnown RBP15.51■□□□□ 0.07
CCT4-201ENST00000394440 VSTM1Q6UX27 236 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 PCGF5Q86SE9 256 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 FAM76AQ8TAV0 307 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 EDEM1Q92611 657 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 ETNK2Q9NVF9 386 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 PSD3Q9NYI0 1048 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 COX16Q9P0S2 106 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 FBXW11Q9UKB1 542 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 OR6C75A6NL08 312 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 HMGB1P1B2RPK0 211 aaPredicted RBP15.51■□□□□ 0.07
CCT4-201ENST00000394440 H7C0C1 242 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 TBC1D4O60343 1298 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 TTC4O95801 387 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 F9P00740 461 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 AMPD1P23109 780 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 GRIK1P39086 918 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 ATP5OP48047 213 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 CXCR3P49682 368 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 NRLP54845 237 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 XRCC4Q13426 336 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 CTXN3Q4LDR2 81 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 EFHC2Q5JST6 749 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms