RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 CRY2Q49AN0 593 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 FSCBQ5H9T9 825 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 PAFAH2Q99487 392 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 SERPINI1Q99574 410 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 BCAP29Q9UHQ4 241 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 VAV3Q9UKW4 847 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 MYO5AQ9Y4I1 1855 aaKnown RBP9.39□□□□□ -0.91
CDH11-202ENST00000394156 AKAP10O43572 662 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 LZTS3O60299 673 aaPredicted RBP9.39□□□□□ -0.91
CDH11-202ENST00000394156 ERBB2P04626 1255 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 GOT1P17174 413 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 CTPS1P17812 591 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 SLC11A2P49281 568 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 LRRC73Q5JTD7 316 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 PLPP4Q5VZY2 271 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 SLC41A1Q8IVJ1 513 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 TRIM4Q9C037 500 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 ADNPQ9H2P0 1102 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 FAM50BQ9Y247 325 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 STAU1O95793 577 aaKnown RBP9.39□□□□□ -0.91
CDH11-202ENST00000394156 TBX2Q13207 712 aaPredicted RBP9.39□□□□□ -0.91
CDH11-202ENST00000394156 STARD3Q14849 445 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 NT5DC1Q5TFE4 455 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 CEP70Q8NHQ1 597 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 FUT8Q9BYC5 575 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 DCLK3Q9C098 648 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 TMPRSS4Q9NRS4 437 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 HEY2Q9UBP5 337 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 ZMPSTE24O75844 475 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 FAM155BO75949 473 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 RPL17P18621 184 aaKnown RBP9.39□□□□□ -0.91
CDH11-202ENST00000394156 FMO4P31512 558 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 NT5C2P49902 561 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 NUDT2P50583 147 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 IRAK1P51617 712 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 SP2Q02086 613 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 GTF2H3Q13889 308 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 CCDC85BQ15834 202 aaPredicted RBP9.39□□□□□ -0.91
CDH11-202ENST00000394156 KCNA10Q16322 511 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 OTOAQ7RTW8 1153 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 TBCBQ99426 244 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 CDT1Q9H211 546 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 ZDHHC6Q9H6R6 413 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 OLFML3Q9NRN5 406 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 CDYLQ9Y232 598 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 SETSIPP0DME0 302 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 TBX4P57082 545 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 UBE3AQ05086 875 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 TLR10Q9BXR5 811 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 C17orf75Q9HAS0 396 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 EML4Q9HC35 981 aaKnown RBP9.39□□□□□ -0.91
CDH11-202ENST00000394156 ITGA11Q9UKX5 1188 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 TCRBV7S2A1N4TA0A589 114 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 B2RBV5 119 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 CXCL11O14625 94 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 PROSCO94903 275 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 MMP3P08254 477 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 SP3Q02447 781 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 SNX17Q15036 470 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 TCHHL1Q5QJ38 904 aaPredicted RBP9.38□□□□□ -0.91
CDH11-202ENST00000394156 ZNF677Q86XU0 584 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 TAGAPQ8N103 731 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 FLCNQ8NFG4 579 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 MKL1Q969V6 931 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 MYLPFQ96A32 169 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 ANGPTL2Q9UKU9 493 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 MANSC4A6NHS7 340 aaPredicted RBP9.38□□□□□ -0.91
CDH11-202ENST00000394156 CCL16O15467 120 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 ARF4P18085 180 aaPredicted RBP9.38□□□□□ -0.91
CDH11-202ENST00000394156 DEFB115Q30KQ5 88 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 SCIMPQ6UWF3 145 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 CTU1Q7Z7A3 348 aaKnown RBP9.38□□□□□ -0.91
CDH11-202ENST00000394156 ARRDC4Q8NCT1 418 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 UPF3AQ9H1J1 476 aaKnown RBP9.38□□□□□ -0.91
CDH11-202ENST00000394156 Q9H521 79 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 TGFB1I1O43294 461 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 SNRPAP09012 282 aaKnown RBP9.38□□□□□ -0.91
CDH11-202ENST00000394156 NDUFV1P49821 464 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 DAB2P98082 770 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 MAMLD1Q13495 774 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 KCNT2Q6UVM3 1135 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 TRIML2Q8N7C3 387 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 JADE3Q92613 823 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 GFM2Q969S9 779 aaKnown RBP9.38□□□□□ -0.91
CDH11-202ENST00000394156 E2F7Q96AV8 911 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 RNF31Q96EP0 1072 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 FAM163AQ96GL9 167 aaPredicted RBP9.38□□□□□ -0.91
CDH11-202ENST00000394156 ING2Q9H160 280 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 RUBCNLQ9H714 662 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 ERVK-5Q9HDB9 667 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 WARS2Q9UGM6 360 aaKnown RBP9.38□□□□□ -0.91
CDH11-202ENST00000394156 AJAP1Q9UKB5 411 aaPredicted RBP9.38□□□□□ -0.91
CDH11-202ENST00000394156 TRPV2Q9Y5S1 764 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 KCPQ6ZWJ8 1503 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 KIAA0391O15091 583 aaKnown RBP9.38□□□□□ -0.91
CDH11-202ENST00000394156 ANGPT2O15123 496 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 PHGDHO43175 533 aaKnown RBP9.38□□□□□ -0.91
CDH11-202ENST00000394156 PTPN1P18031 435 aaKnown RBP9.38□□□□□ -0.91
CDH11-202ENST00000394156 PNPLA4P41247 253 aa9.38□□□□□ -0.91
CDH11-202ENST00000394156 RAD51Q06609 339 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms