RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 SLC39A5Q6ZMH5 540 aa23.03■■□□□ 1.28
HMGA2-203ENST00000393578 PYROXD2Q8N2H3 581 aa23.03■■□□□ 1.28
HMGA2-203ENST00000393578 PRCCQ92733 491 aaPredicted RBP23.03■■□□□ 1.28
HMGA2-203ENST00000393578 NTAN1Q96AB6 310 aa23.03■■□□□ 1.28
HMGA2-203ENST00000393578 RTP4Q96DX8 246 aa23.03■■□□□ 1.28
HMGA2-203ENST00000393578 SMAPO00193 183 aa23.02■■□□□ 1.28
HMGA2-203ENST00000393578 ACSL3O95573 720 aa23.02■■□□□ 1.28
HMGA2-203ENST00000393578 CXCL10P02778 98 aa23.02■■□□□ 1.28
HMGA2-203ENST00000393578 LMAN1P49257 510 aa23.02■■□□□ 1.28
HMGA2-203ENST00000393578 ATN1P54259 1190 aaPredicted RBP23.02■■□□□ 1.28
HMGA2-203ENST00000393578 XRCC4Q13426 336 aa23.02■■□□□ 1.28
HMGA2-203ENST00000393578 KYNUQ16719 465 aa23.02■■□□□ 1.28
HMGA2-203ENST00000393578 TCTN1Q2MV58 587 aa23.02■■□□□ 1.28
HMGA2-203ENST00000393578 EFHC2Q5JST6 749 aa23.02■■□□□ 1.28
HMGA2-203ENST00000393578 BEND5Q7L4P6 421 aa23.02■■□□□ 1.28
HMGA2-203ENST00000393578 CTU1Q7Z7A3 348 aaKnown RBP23.02■■□□□ 1.28
HMGA2-203ENST00000393578 PGM2Q96G03 612 aa23.02■■□□□ 1.28
HMGA2-203ENST00000393578 LRRC4CQ9HCJ2 640 aa23.02■■□□□ 1.28
HMGA2-203ENST00000393578 WDR6Q9NNW5 1121 aaKnown RBP23.02■■□□□ 1.28
HMGA2-203ENST00000393578 NINJ2Q9NZG7 142 aa23.02■■□□□ 1.28
HMGA2-203ENST00000393578 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.01■■□□□ 1.27
HMGA2-203ENST00000393578 DCDC2CA8MYV0 355 aa23.01■■□□□ 1.27
HMGA2-203ENST00000393578 ALDH2P05091 517 aa23.01■■□□□ 1.27
HMGA2-203ENST00000393578 NR1D1P20393 614 aa23.01■■□□□ 1.27
HMGA2-203ENST00000393578 ADRA1BP35368 520 aa23.01■■□□□ 1.27
HMGA2-203ENST00000393578 SKOR1P84550 965 aa23.01■■□□□ 1.27
HMGA2-203ENST00000393578 SCAPQ12770 1279 aa23.01■■□□□ 1.27
HMGA2-203ENST00000393578 NFE2Q16621 373 aaPredicted RBP23.01■■□□□ 1.27
HMGA2-203ENST00000393578 C6orf118Q5T5N4 469 aa23.01■■□□□ 1.27
HMGA2-203ENST00000393578 BSPRYQ5W0U4 402 aa23.01■■□□□ 1.27
HMGA2-203ENST00000393578 KDM7AQ6ZMT4 941 aa23.01■■□□□ 1.27
HMGA2-203ENST00000393578 CPT1BQ92523 772 aa23.01■■□□□ 1.27
HMGA2-203ENST00000393578 SCLYQ96I15 445 aa23.01■■□□□ 1.27
HMGA2-203ENST00000393578 COLEC11Q9BWP8 271 aa23.01■■□□□ 1.27
HMGA2-203ENST00000393578 ROPN1BQ9BZX4 212 aaPredicted RBP23.01■■□□□ 1.27
HMGA2-203ENST00000393578 ROPN1Q9HAT0 212 aaPredicted RBP23.01■■□□□ 1.27
HMGA2-203ENST00000393578 BCCIPQ9P287 314 aaKnown RBP eCLIP23.01■■□□□ 1.27
HMGA2-203ENST00000393578 FBXW11Q9UKB1 542 aa23.01■■□□□ 1.27
HMGA2-203ENST00000393578 COL4A4P53420 1690 aaPredicted RBP23.01■■□□□ 1.27
HMGA2-203ENST00000393578 TTC3P53804 2025 aa23.01■■□□□ 1.27
HMGA2-203ENST00000393578 H3BRJ5 948 aa23.01■■□□□ 1.27
HMGA2-203ENST00000393578 GRIK1P39086 918 aa23.01■■□□□ 1.27
HMGA2-203ENST00000393578 MAGEA4P43358 317 aa23.01■■□□□ 1.27
HMGA2-203ENST00000393578 VARS2Q5ST30 1063 aaKnown RBP23.01■■□□□ 1.27
HMGA2-203ENST00000393578 NPAS4Q8IUM7 802 aa23.01■■□□□ 1.27
HMGA2-203ENST00000393578 NAT8LQ8N9F0 302 aa23.01■■□□□ 1.27
HMGA2-203ENST00000393578 UHMK1Q8TAS1 419 aaKnown RBP23.01■■□□□ 1.27
HMGA2-203ENST00000393578 ADAM32Q8TC27 787 aa23.01■■□□□ 1.27
HMGA2-203ENST00000393578 RNF139Q8WU17 664 aa23.01■■□□□ 1.27
HMGA2-203ENST00000393578 FUBP3Q96I24 572 aaKnown RBP eCLIP23.01■■□□□ 1.275e-9■■■□□ 16.9
HMGA2-203ENST00000393578 TOX2Q96NM4 488 aa23.01■■□□□ 1.27
HMGA2-203ENST00000393578 MRPL9Q9BYD2 267 aaKnown RBP23.01■■□□□ 1.27
HMGA2-203ENST00000393578 DDIT4Q9NX09 232 aa23.01■■□□□ 1.27
HMGA2-203ENST00000393578 PATJQ8NI35 1801 aa23.01■■□□□ 1.27
HMGA2-203ENST00000393578 TET1Q8NFU7 2136 aa23■■□□□ 1.27
HMGA2-203ENST00000393578 TANC1Q9C0D5 1861 aa23■■□□□ 1.27
HMGA2-203ENST00000393578 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23■■□□□ 1.27
HMGA2-203ENST00000393578 TNFRSF10BO14763 440 aa23■■□□□ 1.27
HMGA2-203ENST00000393578 OR4Q2P0C623 313 aa23■■□□□ 1.27
HMGA2-203ENST00000393578 ACTN2P35609 894 aa23■■□□□ 1.27
HMGA2-203ENST00000393578 GATMP50440 423 aa23■■□□□ 1.27
HMGA2-203ENST00000393578 GBE1Q04446 702 aa23■■□□□ 1.27
HMGA2-203ENST00000393578 FAAP100Q0VG06 881 aa23■■□□□ 1.27
HMGA2-203ENST00000393578 DNAJC21Q5F1R6 531 aaKnown RBP23■■□□□ 1.27
HMGA2-203ENST00000393578 NCBP2-AS2Q69YL0 99 aa23■■□□□ 1.27
HMGA2-203ENST00000393578 B4GALNT4Q76KP1 1039 aa23■■□□□ 1.27
HMGA2-203ENST00000393578 CDKL3Q8IVW4 592 aaPredicted RBP23■■□□□ 1.27
HMGA2-203ENST00000393578 EDEM1Q92611 657 aa23■■□□□ 1.27
HMGA2-203ENST00000393578 PHACTR1Q9C0D0 580 aa23■■□□□ 1.27
HMGA2-203ENST00000393578 ARHGEF4Q9NR80 690 aa23■■□□□ 1.27
HMGA2-203ENST00000393578 KCNN4O15554 427 aa23■■□□□ 1.27
HMGA2-203ENST00000393578 AMPD1P23109 780 aa23■■□□□ 1.27
HMGA2-203ENST00000393578 CCL23P55773 120 aa23■■□□□ 1.27
HMGA2-203ENST00000393578 SLC10A2Q12908 348 aaPredicted RBP23■■□□□ 1.27
HMGA2-203ENST00000393578 BZW1Q7L1Q6 419 aaKnown RBP23■■□□□ 1.27
HMGA2-203ENST00000393578 SCAMP5Q8TAC9 235 aa23■■□□□ 1.27
HMGA2-203ENST00000393578 CRISPLD2Q9H0B8 497 aa23■■□□□ 1.27
HMGA2-203ENST00000393578 SAYSD1Q9NPB0 183 aa23■■□□□ 1.27
HMGA2-203ENST00000393578 TMPRSS4Q9NRS4 437 aa23■■□□□ 1.27
HMGA2-203ENST00000393578 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23■■□□□ 1.27
HMGA2-203ENST00000393578 PAK5Q9P286 719 aa23■■□□□ 1.27
HMGA2-203ENST00000393578 RASGRF2O14827 1237 aa22.99■■□□□ 1.27
HMGA2-203ENST00000393578 RBL1P28749 1068 aa22.99■■□□□ 1.27
HMGA2-203ENST00000393578 MNX1P50219 401 aaPredicted RBP22.99■■□□□ 1.27
HMGA2-203ENST00000393578 SLC5A3P53794 718 aa22.99■■□□□ 1.27
HMGA2-203ENST00000393578 MRPL58Q14197 206 aaKnown RBP22.99■■□□□ 1.27
HMGA2-203ENST00000393578 ARL13BQ3SXY8 428 aa22.99■■□□□ 1.27
HMGA2-203ENST00000393578 GLIPR1L2Q4G1C9 344 aa22.99■■□□□ 1.27
HMGA2-203ENST00000393578 SLC45A4Q5BKX6 768 aa22.99■■□□□ 1.27
HMGA2-203ENST00000393578 FAM171A1Q5VUB5 890 aa22.99■■□□□ 1.27
HMGA2-203ENST00000393578 CENPUQ71F23 418 aa22.99■■□□□ 1.27
HMGA2-203ENST00000393578 TLCD1Q96CP7 247 aa22.99■■□□□ 1.27
HMGA2-203ENST00000393578 TTC25Q96NG3 672 aa22.99■■□□□ 1.27
HMGA2-203ENST00000393578 ABI2Q9NYB9 513 aaPredicted RBP22.99■■□□□ 1.27
HMGA2-203ENST00000393578 DTLQ9NZJ0 730 aa22.99■■□□□ 1.27
HMGA2-203ENST00000393578 NOVA2Q9UNW9 492 aaKnown RBP22.99■■□□□ 1.27
HMGA2-203ENST00000393578 A6NNZ2 444 aa22.98■■□□□ 1.27
HMGA2-203ENST00000393578 SHOX2O60902 331 aaPredicted RBP22.98■■□□□ 1.27
HMGA2-203ENST00000393578 CAPN2P17655 700 aa22.98■■□□□ 1.27
HMGA2-203ENST00000393578 SLC11A1P49279 550 aa22.98■■□□□ 1.27
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