RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 ATP5OP48047 213 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 DUSP4Q13115 394 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 GPS2Q13227 327 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 ARL13BQ3SXY8 428 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 DARS2Q6PI48 645 aaKnown RBP8.98□□□□□ -0.97
TDP1-203ENST00000393454 ALLCQ8N6M5 410 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 CCDC89Q8N998 374 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 PCDH19Q8TAB3 1148 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 SLC35B2Q8TB61 432 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 SPPL2BQ8TCT7 592 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 RSAD2Q8WXG1 361 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 NKD2Q969F2 451 aaPredicted RBP8.98□□□□□ -0.97
TDP1-203ENST00000393454 SNF8Q96H20 258 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 OXCT2Q9BYC2 517 aaPredicted RBP8.98□□□□□ -0.97
TDP1-203ENST00000393454 FBXO44Q9H4M3 255 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 ABCC13Q9NSE7 274 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 OGFRQ9NZT2 677 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 MTRF1LQ9UGC7 380 aaKnown RBP8.98□□□□□ -0.97
TDP1-203ENST00000393454 HPCAL4Q9UM19 191 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 MRPL42Q9Y6G3 142 aaKnown RBP8.98□□□□□ -0.97
TDP1-203ENST00000393454 TBC1D4O60343 1298 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 BAIAP3O94812 1187 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 FGBP02675 491 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 ITGAVP06756 1048 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 HAPLN1P10915 354 aaPredicted RBP8.97□□□□□ -0.97
TDP1-203ENST00000393454 ETS1P14921 441 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 GOT1P17174 413 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 LAG3P18627 525 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 OR1D2P34982 312 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 DHX9Q08211 1270 aaKnown RBP8.97□□□□□ -0.97
TDP1-203ENST00000393454 SMARCB1Q12824 385 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 PPIGQ13427 754 aaKnown RBP eCLIP8.97□□□□□ -0.97
TDP1-203ENST00000393454 OASLQ15646 514 aaKnown RBP8.97□□□□□ -0.97
TDP1-203ENST00000393454 B4GALNT4Q76KP1 1039 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 BNIPLQ7Z465 357 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 TAC4Q86UU9 113 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 ZC3H18Q86VM9 953 aaKnown RBP8.97□□□□□ -0.97
TDP1-203ENST00000393454 CMTR2Q8IYT2 770 aaKnown RBP8.97□□□□□ -0.97
TDP1-203ENST00000393454 PQLC3Q8N755 202 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 PLD5Q8N7P1 536 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 COLGALT1Q8NBJ5 622 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 TSEN2Q8NCE0 465 aaKnown RBP8.97□□□□□ -0.97
TDP1-203ENST00000393454 FBXO25Q8TCJ0 367 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 DQX1Q8TE96 717 aaKnown RBP8.97□□□□□ -0.97
TDP1-203ENST00000393454 RNF139Q8WU17 664 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 BADQ92934 168 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 LRRC45Q96CN5 670 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 VN1R3Q9BXE9 311 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 WDCPQ9H6R7 721 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 VIPAS39Q9H9C1 493 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 ZDHHC18Q9NUE0 388 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 MTMR10Q9NXD2 777 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 SPG21Q9NZD8 308 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 GRHL1Q9NZI5 618 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 CWC15Q9P013 229 aaKnown RBP8.97□□□□□ -0.97
TDP1-203ENST00000393454 WHRNQ9P202 907 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 ANAPC5Q9UJX4 755 aa8.97□□□□□ -0.97
TDP1-203ENST00000393454 H3BRJ5 948 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 EEF2KO00418 725 aaKnown RBP8.96□□□□□ -0.97
TDP1-203ENST00000393454 ADAM12O43184 909 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 MAP3K6O95382 1288 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 SOD2P04179 222 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 ZSCAN5DPP0CG00 497 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 RBP3P10745 1247 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 ZFXP17010 805 aaPredicted RBP8.96□□□□□ -0.97
TDP1-203ENST00000393454 ITIH2P19823 946 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 TGM2P21980 687 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 AMPD1P23109 780 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 YWHAQP27348 245 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 CA8P35219 290 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 ADRA1BP35368 520 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 PGFP49763 221 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 ITGA8P53708 1063 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 USP46P62068 366 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 RPL10AP62906 217 aaKnown RBP8.96□□□□□ -0.97
TDP1-203ENST00000393454 ROR1Q01973 937 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 GPS1Q13098 491 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 P3H1Q32P28 736 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 CFAP58Q5T655 872 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 SLC9A4Q6AI14 798 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 ZDHHC24Q6UX98 284 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 DENND5BQ6ZUT9 1274 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 SCD5Q86SK9 330 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 MON1AQ86VX9 555 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 CCDC25Q86WR0 208 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 VSIG1Q86XK7 387 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 PSTKQ8IV42 348 aaKnown RBP8.96□□□□□ -0.97
TDP1-203ENST00000393454 KRT222Q8N1A0 295 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 SLC39A11Q8N1S5 342 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 FAM71BQ8TC56 605 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 CCHCR1Q8TD31 782 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 GIPC2Q8TF65 315 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 C2orf15Q8WU43 125 aaKnown RBP8.96□□□□□ -0.97
TDP1-203ENST00000393454 UBLCP1Q8WVY7 318 aaPredicted RBP8.96□□□□□ -0.97
TDP1-203ENST00000393454 PIK3R5Q8WYR1 880 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 ART4Q93070 314 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 FBXO32Q969P5 355 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 FAF2Q96CS3 445 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 CSPG4P5Q96PW8 444 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 RUFY1Q96T51 708 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms