RNA–Protein interactions for RNA: ENST00000393448.6

RUFY1-203, Transcript of RUN and FYVE domain containing 1, humanhuman

TSL 1 (best)

Gene RUFY1, Length 2,320 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY1-203ENST00000393448 TCRBV7S3A2A0A539 114 aa18.2■□□□□ 0.5
RUFY1-203ENST00000393448 I6L893 689 aaPredicted RBP18.2■□□□□ 0.5
RUFY1-203ENST00000393448 TADA2AO75478 443 aa18.2■□□□□ 0.5
RUFY1-203ENST00000393448 BANF1O75531 89 aa18.2■□□□□ 0.5
RUFY1-203ENST00000393448 EIF3BP55884 814 aaKnown RBP18.2■□□□□ 0.5
RUFY1-203ENST00000393448 FASTKD3Q14CZ7 662 aaKnown RBP18.2■□□□□ 0.5
RUFY1-203ENST00000393448 TRMT10CQ7L0Y3 403 aaKnown RBP18.2■□□□□ 0.5
RUFY1-203ENST00000393448 ZCCHC9Q8N567 271 aaKnown RBP18.2■□□□□ 0.5
RUFY1-203ENST00000393448 CASD1Q96PB1 797 aa18.2■□□□□ 0.5
RUFY1-203ENST00000393448 PCDH10Q9P2E7 1040 aa18.2■□□□□ 0.5
RUFY1-203ENST00000393448 KANSL3Q9P2N6 904 aa18.2■□□□□ 0.5
RUFY1-203ENST00000393448 NOVA2Q9UNW9 492 aaKnown RBP18.2■□□□□ 0.5
RUFY1-203ENST00000393448 HMGB1P1B2RPK0 211 aaPredicted RBP18.2■□□□□ 0.5
RUFY1-203ENST00000393448 NT5C1B-RDH14C9J2C7 533 aa18.2■□□□□ 0.5
RUFY1-203ENST00000393448 PITPNM1O00562 1244 aa18.2■□□□□ 0.5
RUFY1-203ENST00000393448 TGM2P21980 687 aa18.2■□□□□ 0.5
RUFY1-203ENST00000393448 HNRNPH2P55795 449 aaKnown RBP18.2■□□□□ 0.5
RUFY1-203ENST00000393448 DEFB128Q7Z7B8 93 aa18.2■□□□□ 0.5
RUFY1-203ENST00000393448 SPATA2LQ8IUW3 424 aaPredicted RBP18.2■□□□□ 0.5
RUFY1-203ENST00000393448 CPT1BQ92523 772 aa18.2■□□□□ 0.5
RUFY1-203ENST00000393448 SEPT8Q92599 483 aa18.2■□□□□ 0.5
RUFY1-203ENST00000393448 PRCCQ92733 491 aaPredicted RBP18.2■□□□□ 0.5
RUFY1-203ENST00000393448 BEGAINQ9BUH8 593 aa18.2■□□□□ 0.5
RUFY1-203ENST00000393448 USP3Q9Y6I4 520 aa18.2■□□□□ 0.5
RUFY1-203ENST00000393448 LAMA2P24043 3122 aaKnown RBP18.19■□□□□ 0.5
RUFY1-203ENST00000393448 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.19■□□□□ 0.5
RUFY1-203ENST00000393448 KCNN4O15554 427 aa18.19■□□□□ 0.5
RUFY1-203ENST00000393448 CREB3O43889 395 aa18.19■□□□□ 0.5
RUFY1-203ENST00000393448 CAPN15O75808 1086 aa18.19■□□□□ 0.5
RUFY1-203ENST00000393448 TTC4O95801 387 aa18.19■□□□□ 0.5
RUFY1-203ENST00000393448 NR1D1P20393 614 aa18.19■□□□□ 0.5
RUFY1-203ENST00000393448 RBL1P28749 1068 aa18.19■□□□□ 0.5
RUFY1-203ENST00000393448 GRIK1P39086 918 aa18.19■□□□□ 0.5
RUFY1-203ENST00000393448 SDHAF4Q5VUM1 108 aa18.19■□□□□ 0.5
RUFY1-203ENST00000393448 HIPK3Q9H422 1215 aa18.19■□□□□ 0.5
RUFY1-203ENST00000393448 USP29Q9HBJ7 922 aa18.19■□□□□ 0.5
RUFY1-203ENST00000393448 SAYSD1Q9NPB0 183 aa18.19■□□□□ 0.5
RUFY1-203ENST00000393448 ABI2Q9NYB9 513 aaPredicted RBP18.19■□□□□ 0.5
RUFY1-203ENST00000393448 LRFN2Q9ULH4 789 aa18.19■□□□□ 0.5
RUFY1-203ENST00000393448 FARP1Q9Y4F1 1045 aaPredicted RBP18.19■□□□□ 0.5
RUFY1-203ENST00000393448 NR2E3Q9Y5X4 410 aa18.19■□□□□ 0.5
RUFY1-203ENST00000393448 CYP2C18P33260 490 aa18.18■□□□□ 0.5
RUFY1-203ENST00000393448 PGFP49763 221 aa18.18■□□□□ 0.5
RUFY1-203ENST00000393448 MORF4L2Q15014 288 aa18.18■□□□□ 0.5
RUFY1-203ENST00000393448 LONRF1Q17RB8 773 aa18.18■□□□□ 0.5
RUFY1-203ENST00000393448 PGLYRP2Q96PD5 576 aa18.18■□□□□ 0.5
RUFY1-203ENST00000393448 GPR62Q9BZJ7 368 aa18.18■□□□□ 0.5
RUFY1-203ENST00000393448 WDR6Q9NNW5 1121 aaKnown RBP18.18■□□□□ 0.5
RUFY1-203ENST00000393448 DDIT4Q9NX09 232 aa18.18■□□□□ 0.5
RUFY1-203ENST00000393448 FAM72CH0Y354 149 aa18.18■□□□□ 0.5
RUFY1-203ENST00000393448 TMEM189-UBE2V1I3L0A0 370 aa18.18■□□□□ 0.5
RUFY1-203ENST00000393448 PAX3P23760 479 aa18.18■□□□□ 0.5
RUFY1-203ENST00000393448 MNX1P50219 401 aaPredicted RBP18.18■□□□□ 0.5
RUFY1-203ENST00000393448 BASP1P80723 227 aaKnown RBP18.18■□□□□ 0.5
RUFY1-203ENST00000393448 VARS2Q5ST30 1063 aaKnown RBP18.18■□□□□ 0.5
RUFY1-203ENST00000393448 FAM72AQ5TYM5 149 aa18.18■□□□□ 0.5
RUFY1-203ENST00000393448 FAM171A1Q5VUB5 890 aa18.18■□□□□ 0.5
RUFY1-203ENST00000393448 BSPRYQ5W0U4 402 aa18.18■□□□□ 0.5
RUFY1-203ENST00000393448 NCBP2-AS2Q69YL0 99 aa18.18■□□□□ 0.5
RUFY1-203ENST00000393448 FAM72DQ6L9T8 149 aa18.18■□□□□ 0.5
RUFY1-203ENST00000393448 FAM72BQ86X60 149 aa18.18■□□□□ 0.5
RUFY1-203ENST00000393448 VSIG1Q86XK7 387 aa18.18■□□□□ 0.5
RUFY1-203ENST00000393448 SCN4BQ8IWT1 228 aa18.18■□□□□ 0.5
RUFY1-203ENST00000393448 OAZ2O95190 189 aa18.17■□□□□ 0.5
RUFY1-203ENST00000393448 MAGEA4P43358 317 aa18.17■□□□□ 0.5
RUFY1-203ENST00000393448 GPR15P49685 360 aa18.17■□□□□ 0.5
RUFY1-203ENST00000393448 SLC5A3P53794 718 aa18.17■□□□□ 0.5
RUFY1-203ENST00000393448 MAGOHP61326 146 aaKnown RBP18.17■□□□□ 0.5
RUFY1-203ENST00000393448 FAAP100Q0VG06 881 aa18.17■□□□□ 0.5
RUFY1-203ENST00000393448 MAPRE1Q15691 268 aaKnown RBP18.17■□□□□ 0.5
RUFY1-203ENST00000393448 PM20D1Q6GTS8 502 aa18.17■□□□□ 0.5
RUFY1-203ENST00000393448 TSPYL1Q9H0U9 437 aa18.17■□□□□ 0.5
RUFY1-203ENST00000393448 ELAC1Q9H777 363 aaKnown RBP18.17■□□□□ 0.5
RUFY1-203ENST00000393448 ARHGEF4Q9NR80 690 aa18.17■□□□□ 0.5
RUFY1-203ENST00000393448 PSD3Q9NYI0 1048 aa18.17■□□□□ 0.5
RUFY1-203ENST00000393448 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.17■□□□□ 0.5
RUFY1-203ENST00000393448 ADAM28Q9UKQ2 775 aa18.17■□□□□ 0.5
RUFY1-203ENST00000393448 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.17■□□□□ 0.5
RUFY1-203ENST00000393448 ARHGEF37A1IGU5 675 aa18.17■□□□□ 0.5
RUFY1-203ENST00000393448 TMEM63AO94886 807 aa18.17■□□□□ 0.5
RUFY1-203ENST00000393448 ARL4AP40617 200 aa18.17■□□□□ 0.5
RUFY1-203ENST00000393448 SLC11A1P49279 550 aa18.17■□□□□ 0.5
RUFY1-203ENST00000393448 TRIM60Q495X7 471 aa18.17■□□□□ 0.5
RUFY1-203ENST00000393448 SLC39A5Q6ZMH5 540 aa18.17■□□□□ 0.5
RUFY1-203ENST00000393448 CAPN12Q6ZSI9 719 aa18.17■□□□□ 0.5
RUFY1-203ENST00000393448 TMEM173Q86WV6 379 aaPredicted RBP18.17■□□□□ 0.5
RUFY1-203ENST00000393448 DIS3LQ8TF46 1054 aaKnown RBP18.17■□□□□ 0.5
RUFY1-203ENST00000393448 RNF139Q8WU17 664 aa18.17■□□□□ 0.5
RUFY1-203ENST00000393448 ZCWPW1Q9H0M4 648 aa18.17■□□□□ 0.5
RUFY1-203ENST00000393448 MARCH5Q9NX47 278 aa18.17■□□□□ 0.5
RUFY1-203ENST00000393448 SHOC2Q9UQ13 582 aa18.17■□□□□ 0.5
RUFY1-203ENST00000393448 PATJQ8NI35 1801 aa18.16■□□□□ 0.5
RUFY1-203ENST00000393448 ZNF487B1APH4 448 aa18.16■□□□□ 0.5
RUFY1-203ENST00000393448 COL6A1P12109 1028 aa18.16■□□□□ 0.5
RUFY1-203ENST00000393448 STIP1P31948 543 aaKnown RBP18.16■□□□□ 0.5
RUFY1-203ENST00000393448 TLE2Q04725 743 aa18.16■□□□□ 0.5
RUFY1-203ENST00000393448 FNBP1LQ5T0N5 605 aa18.16■□□□□ 0.5
RUFY1-203ENST00000393448 AGBL2Q5U5Z8 902 aa18.16■□□□□ 0.5
RUFY1-203ENST00000393448 C4orf50Q6ZRC1 276 aa18.16■□□□□ 0.5
RUFY1-203ENST00000393448 HOOK3Q86VS8 718 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms