RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 RNF139Q8WU17 664 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 FAM149B1Q96BN6 582 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 HSFY1Q96LI6 401 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 BPIFA3Q9BQP9 254 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 SLC4A5Q9BY07 1137 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 CBX8Q9HC52 389 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 SPHK2Q9NRA0 654 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 ABCC13Q9NSE7 274 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 PLK2Q9NYY3 685 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 TBC1D14Q9P2M4 693 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 LSM7Q9UK45 103 aaKnown RBP8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 AGO1Q9UL18 857 aaKnown RBP8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 NAALADL1Q9UQQ1 740 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 SYNJ2BP-COX16A0A087WUM0 186 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 K7EQS6 105 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 TSPAN3O60637 253 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 FBXO21O94952 628 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 MMEP08473 750 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 TDGF1P13385 188 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 NCAM1P13591 858 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 TYRP14679 529 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 KRT9P35527 623 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 MAGEA9P43362 315 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 PXNP49023 591 aaPredicted RBP8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 RPL34P49207 117 aaKnown RBP8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 SGSHP51688 502 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 JAM2P57087 298 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 AMPD2Q01433 879 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 ARID5AQ03989 594 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 GAD2Q05329 585 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 PTPN20Q4JDL3 420 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 C2orf27AQ580R0 203 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 DGKKQ5KSL6 1271 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 EMC10Q5UCC4 262 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 SYPL2Q5VXT5 272 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 HEATR6Q6AI08 1181 aaKnown RBP8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 C1orf228Q6PIY5 440 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 TOGARAM2Q6ZUX3 1019 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 PHLDB2Q86SQ0 1253 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 TAC4Q86UU9 113 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 ALYREFQ86V81 257 aaKnown RBP8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 SCML4Q8N228 414 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 PHTF2Q8N3S3 785 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 ZNF276Q8N554 614 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 NEK11Q8NG66 645 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 RPLP0P6Q8NHW5 317 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 EPS8L1Q8TE68 723 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 DQX1Q8TE96 717 aaKnown RBP8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 IRGQQ8WZA9 623 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 DDX1Q92499 740 aaKnown RBP8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 GOLGA1Q92805 767 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 RNF25Q96BH1 459 aaPredicted RBP8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 ERLEC1Q96DZ1 483 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 PPP1R13BQ96KQ4 1090 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 NAP1L5Q96NT1 182 aaPredicted RBP8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 CDK5RAP1Q96SZ6 601 aaKnown RBP8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 BBS2Q9BXC9 721 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 STK33Q9BYT3 514 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 PDCL3Q9H2J4 239 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 PRMT8Q9NR22 394 aaPredicted RBP8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 ARHGEF4Q9NR80 690 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 COX16Q9P0S2 106 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 STRIP2Q9ULQ0 834 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 CLEC4EQ9ULY5 219 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 PCDHGC3Q9UN70 934 aa8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 ARIH1Q9Y4X5 557 aaPredicted RBP8.01□□□□□ -1.13
HMGB3P1-201ENST00000393368 MIA3Q5JRA6 1907 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 GOLGA6L7A0A1B0GV03 622 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 LRRC10BA6NIK2 292 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 SMTNL1A8MU46 457 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 CHURC1-FNTBB4DL54 471 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 K7ESF4 209 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 CAPN9O14815 690 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 HOXC11O43248 304 aaPredicted RBP8□□□□□ -1.13
HMGB3P1-201ENST00000393368 TULP3O75386 442 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 KAT7O95251 611 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 MOCS2O96007 188 aaPredicted RBP8□□□□□ -1.13
HMGB3P1-201ENST00000393368 CHRNB2P17787 502 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 DRD1P21728 446 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 SOX5P35711 763 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 ACADSBP45954 432 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 CXCL12P48061 93 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 FNTBP49356 437 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 COG7P83436 770 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 SRSF5Q13243 272 aaKnown RBP8□□□□□ -1.13
HMGB3P1-201ENST00000393368 TRIP4Q15650 581 aaPredicted RBP8□□□□□ -1.13
HMGB3P1-201ENST00000393368 MEA1Q16626 185 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 NAA35Q5VZE5 725 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 OR6B2Q6IFH4 312 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 MSANTD2Q6P1R3 559 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 TMEM110Q86TL2 294 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 ETFBKMTQ8IXQ9 262 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 SPEM1Q8N4L4 309 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 CCDC33Q8N5R6 958 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 KIAA1958Q8N8K9 716 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 STK32AQ8WU08 396 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 CPA5Q8WXQ8 436 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 PLD4Q96BZ4 506 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 OTUB2Q96DC9 234 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 MYEOVQ96EZ4 313 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms