RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 FAM184AQ8NB25 1140 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 OR56A3Q8NH54 315 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 HERVK_113Q902F9 699 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 EXT2Q93063 718 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 FAM111AQ96PZ2 611 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 WDR24Q96S15 920 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 DCLRE1CQ96SD1 692 aaKnown RBP3.72□□□□□ -1.81
XRN1-202ENST00000392981 PAFAH2Q99487 392 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 HEMGNQ9BXL5 484 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 FAM105AQ9NUU6 356 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 CACNG4Q9UBN1 327 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 SARDHQ9UL12 918 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 PCDHB7Q9Y5E2 793 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 TAF6LQ9Y6J9 622 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 TCRBV7S2A1N4TA0A589 114 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 GPC4O75487 556 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 PNPP00491 289 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 TUBB4AP04350 444 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 LAG3P18627 525 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 EN2P19622 333 aaPredicted RBP3.72□□□□□ -1.81
XRN1-202ENST00000392981 CTSKP43235 329 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 CCT4P50991 539 aaKnown RBP3.72□□□□□ -1.81
XRN1-202ENST00000392981 KIAA1841Q6NSI8 718 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 SRRM1Q8IYB3 904 aaKnown RBP3.72□□□□□ -1.81
XRN1-202ENST00000392981 ADSSL1Q8N142 457 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 NUP43Q8NFH3 380 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 OR2I1PQ8NGU4 316 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 ASB15Q8WXK1 588 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 FCGR1BQ92637 280 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 DYDC2Q96IM9 177 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 FAM210AQ96ND0 272 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 HIST1H2AAQ96QV6 131 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 SPXQ9BT56 116 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.72□□□□□ -1.81
XRN1-202ENST00000392981 EXOC1Q9NV70 894 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 BABAM1Q9NWV8 329 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 SESN1Q9Y6P5 492 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 VWA3AA6NCI4 1184 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 EFSO43281 561 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 HRO43593 1189 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 CLEC3BP05452 202 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 THBS4P35443 961 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 MCAMP43121 646 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 RABIFP47224 123 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 FOXO1Q12778 655 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 IKQ13123 557 aaPredicted RBP3.72□□□□□ -1.81
XRN1-202ENST00000392981 CBFBQ13951 182 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 GLE1Q53GS7 698 aaKnown RBP3.72□□□□□ -1.81
XRN1-202ENST00000392981 MACC1Q6ZN28 852 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 CATSPERGQ6ZRH7 1159 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 SCML4Q8N228 414 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 PPP2R3CQ969Q6 453 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 ZFP42Q96MM3 310 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 TWNKQ96RR1 684 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 C2orf40Q9H1Z8 148 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 AKIRIN1Q9H9L7 192 aaPredicted RBP3.72□□□□□ -1.81
XRN1-202ENST00000392981 POLR3BQ9NW08 1133 aaPredicted RBP3.72□□□□□ -1.81
XRN1-202ENST00000392981 ANO10Q9NW15 660 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.72□□□□□ -1.81
XRN1-202ENST00000392981 TBC1D14Q9P2M4 693 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 ATP6V0A2Q9Y487 856 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.71□□□□□ -1.81
XRN1-202ENST00000392981 A0A0G2JPF8 293 aa3.71□□□□□ -1.81
XRN1-202ENST00000392981 HNRNPCL3B7ZW38 293 aa3.71□□□□□ -1.81
XRN1-202ENST00000392981 STX6O43752 255 aa3.71□□□□□ -1.81
XRN1-202ENST00000392981 HNRNPCL4P0DMR1 293 aa3.71□□□□□ -1.81
XRN1-202ENST00000392981 ACTN1P12814 892 aa3.71□□□□□ -1.81
XRN1-202ENST00000392981 XRCC6P12956 609 aaKnown RBP eCLIP3.71□□□□□ -1.81
XRN1-202ENST00000392981 ALADP13716 330 aa3.71□□□□□ -1.81
XRN1-202ENST00000392981 IL7RP16871 459 aa3.71□□□□□ -1.81
XRN1-202ENST00000392981 PFKLP17858 780 aa3.71□□□□□ -1.81
XRN1-202ENST00000392981 CAMLGP49069 296 aa3.71□□□□□ -1.81
XRN1-202ENST00000392981 EIF3BP55884 814 aaKnown RBP3.71□□□□□ -1.81
XRN1-202ENST00000392981 EIF4A1P60842 406 aaKnown RBP3.71□□□□□ -1.81
XRN1-202ENST00000392981 LACTBP83111 547 aaPredicted RBP3.71□□□□□ -1.81
XRN1-202ENST00000392981 SOX4Q06945 474 aaPredicted RBP3.71□□□□□ -1.81
XRN1-202ENST00000392981 GRM4Q14833 912 aa3.71□□□□□ -1.81
XRN1-202ENST00000392981 RAB3GAP1Q15042 981 aa3.71□□□□□ -1.81
XRN1-202ENST00000392981 CHRNA2Q15822 529 aa3.71□□□□□ -1.81
XRN1-202ENST00000392981 DUSP28Q4G0W2 176 aa3.71□□□□□ -1.81
XRN1-202ENST00000392981 KRT74Q7RTS7 529 aa3.71□□□□□ -1.81
XRN1-202ENST00000392981 IRF2BP1Q8IU81 584 aa3.71□□□□□ -1.81
XRN1-202ENST00000392981 ZNF655Q8N720 491 aaPredicted RBP3.71□□□□□ -1.81
XRN1-202ENST00000392981 FBXL18Q96ME1 805 aa3.71□□□□□ -1.81
XRN1-202ENST00000392981 PPANQ9NQ55 473 aaKnown RBP3.71□□□□□ -1.81
XRN1-202ENST00000392981 FBXO28Q9NVF7 368 aa3.71□□□□□ -1.81
XRN1-202ENST00000392981 B3GALT1Q9Y5Z6 326 aa3.71□□□□□ -1.81
XRN1-202ENST00000392981 TRBC2A0A5B9 178 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 A4D1N5 150 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 CACNB4O00305 520 aaPredicted RBP3.71□□□□□ -1.82
XRN1-202ENST00000392981 SERPING1P05155 500 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 AVPR2P30518 371 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 NPY4RP50391 375 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 CCR5P51681 352 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 SLC12A3P55017 1021 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 UFM1P61960 85 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 ARHGEF7Q14155 803 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 DPCR1Q3MIW9 517 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 MRNIPQ6NTE8 343 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 TMEM270Q6UE05 265 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms