RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 ABI2Q9NYB9 513 aaPredicted RBP18.35■□□□□ 0.53
SHTN1-203ENST00000392901 CWC15Q9P013 229 aaKnown RBP18.35■□□□□ 0.53
SHTN1-203ENST00000392901 ADAM28Q9UKQ2 775 aa18.35■□□□□ 0.53
SHTN1-203ENST00000392901 MKI67P46013 3256 aaKnown RBP18.35■□□□□ 0.53
SHTN1-203ENST00000392901 NT5C1B-RDH14C9J2C7 533 aa18.34■□□□□ 0.53
SHTN1-203ENST00000392901 OAZ2O95190 189 aa18.34■□□□□ 0.53
SHTN1-203ENST00000392901 ACSL3O95573 720 aa18.34■□□□□ 0.53
SHTN1-203ENST00000392901 GOT1P17174 413 aa18.34■□□□□ 0.53
SHTN1-203ENST00000392901 TGM2P21980 687 aa18.34■□□□□ 0.53
SHTN1-203ENST00000392901 PBX3P40426 434 aa18.34■□□□□ 0.53
SHTN1-203ENST00000392901 MAGOHP61326 146 aaKnown RBP18.34■□□□□ 0.53
SHTN1-203ENST00000392901 GUCY1A3Q02108 690 aa18.34■□□□□ 0.53
SHTN1-203ENST00000392901 FAM171A1Q5VUB5 890 aa18.34■□□□□ 0.53
SHTN1-203ENST00000392901 LEKR1Q6ZMV7 388 aa18.34■□□□□ 0.53
SHTN1-203ENST00000392901 TRMT10CQ7L0Y3 403 aaKnown RBP18.34■□□□□ 0.53
SHTN1-203ENST00000392901 BHLHA9Q7RTU4 235 aa18.34■□□□□ 0.53
SHTN1-203ENST00000392901 ANKRD33Q7Z3H0 272 aa18.34■□□□□ 0.53
SHTN1-203ENST00000392901 BNIPLQ7Z465 357 aa18.34■□□□□ 0.53
SHTN1-203ENST00000392901 VSIG1Q86XK7 387 aa18.34■□□□□ 0.53
SHTN1-203ENST00000392901 LRRN4Q8WUT4 740 aa18.34■□□□□ 0.53
SHTN1-203ENST00000392901 FAF2Q96CS3 445 aa18.34■□□□□ 0.53
SHTN1-203ENST00000392901 CSPG4P5Q96PW8 444 aa18.34■□□□□ 0.53
SHTN1-203ENST00000392901 TSPYL1Q9H0U9 437 aa18.34■□□□□ 0.53
SHTN1-203ENST00000392901 SCN5AQ14524 2016 aa18.34■□□□□ 0.53
SHTN1-203ENST00000392901 RPL22P35268 128 aaKnown RBP18.34■□□□□ 0.53
SHTN1-203ENST00000392901 MNX1P50219 401 aaPredicted RBP18.34■□□□□ 0.53
SHTN1-203ENST00000392901 HNRNPH2P55795 449 aaKnown RBP18.34■□□□□ 0.53
SHTN1-203ENST00000392901 KYNUQ16719 465 aa18.34■□□□□ 0.53
SHTN1-203ENST00000392901 VARS2Q5ST30 1063 aaKnown RBP18.34■□□□□ 0.53
SHTN1-203ENST00000392901 SCN4BQ8IWT1 228 aa18.34■□□□□ 0.53
SHTN1-203ENST00000392901 EPS8L3Q8TE67 593 aaKnown RBP18.34■□□□□ 0.53
SHTN1-203ENST00000392901 GPR62Q9BZJ7 368 aa18.34■□□□□ 0.53
SHTN1-203ENST00000392901 TBKBP1A7MCY6 615 aa18.33■□□□□ 0.52
SHTN1-203ENST00000392901 UPP2O95045 317 aa18.33■□□□□ 0.52
SHTN1-203ENST00000392901 AMPD1P23109 780 aa18.33■□□□□ 0.52
SHTN1-203ENST00000392901 ARL4AP40617 200 aa18.33■□□□□ 0.52
SHTN1-203ENST00000392901 SLCO1A2P46721 670 aa18.33■□□□□ 0.52
SHTN1-203ENST00000392901 BSPRYQ5W0U4 402 aa18.33■□□□□ 0.52
SHTN1-203ENST00000392901 PM20D1Q6GTS8 502 aa18.33■□□□□ 0.52
SHTN1-203ENST00000392901 CCDC33Q8N5R6 958 aa18.33■□□□□ 0.52
SHTN1-203ENST00000392901 RABEP2Q9H5N1 569 aa18.33■□□□□ 0.52
SHTN1-203ENST00000392901 DDIT4Q9NX09 232 aa18.33■□□□□ 0.52
SHTN1-203ENST00000392901 CREB3O43889 395 aa18.32■□□□□ 0.52
SHTN1-203ENST00000392901 STIP1P31948 543 aaKnown RBP18.32■□□□□ 0.52
SHTN1-203ENST00000392901 SLC11A1P49279 550 aa18.32■□□□□ 0.52
SHTN1-203ENST00000392901 CTCFP49711 727 aaPredicted RBP18.32■□□□□ 0.52
SHTN1-203ENST00000392901 GBE1Q04446 702 aa18.32■□□□□ 0.52
SHTN1-203ENST00000392901 HOOK3Q86VS8 718 aa18.32■□□□□ 0.52
SHTN1-203ENST00000392901 NPAS4Q8IUM7 802 aa18.32■□□□□ 0.52
SHTN1-203ENST00000392901 DCP1BQ8IZD4 617 aaKnown RBP18.32■□□□□ 0.52
SHTN1-203ENST00000392901 DIS3LQ8TF46 1054 aaKnown RBP18.32■□□□□ 0.52
SHTN1-203ENST00000392901 TLCD1Q96CP7 247 aa18.32■□□□□ 0.52
SHTN1-203ENST00000392901 PGLYRP2Q96PD5 576 aa18.32■□□□□ 0.52
SHTN1-203ENST00000392901 ZCWPW1Q9H0M4 648 aa18.32■□□□□ 0.52
SHTN1-203ENST00000392901 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.32■□□□□ 0.52
SHTN1-203ENST00000392901 ZNF487B1APH4 448 aa18.32■□□□□ 0.52
SHTN1-203ENST00000392901 SLC5A3P53794 718 aa18.32■□□□□ 0.52
SHTN1-203ENST00000392901 CTXN3Q4LDR2 81 aa18.32■□□□□ 0.52
SHTN1-203ENST00000392901 RNASEH2BQ5TBB1 312 aaKnown RBP18.32■□□□□ 0.52
SHTN1-203ENST00000392901 ZCCHC9Q8N567 271 aaKnown RBP18.32■□□□□ 0.52
SHTN1-203ENST00000392901 RBM15Q96T37 977 aaKnown RBP eCLIP18.32■□□□□ 0.52
SHTN1-203ENST00000392901 COLEC11Q9BWP8 271 aa18.32■□□□□ 0.52
SHTN1-203ENST00000392901 PNPLA8Q9NP80 782 aa18.32■□□□□ 0.52
SHTN1-203ENST00000392901 ETNK2Q9NVF9 386 aa18.32■□□□□ 0.52
SHTN1-203ENST00000392901 WBP1LQ9NX94 342 aa18.32■□□□□ 0.52
SHTN1-203ENST00000392901 NINJ2Q9NZG7 142 aa18.32■□□□□ 0.52
SHTN1-203ENST00000392901 ATP11BQ9Y2G3 1177 aa18.32■□□□□ 0.52
SHTN1-203ENST00000392901 USP3Q9Y6I4 520 aa18.32■□□□□ 0.52
SHTN1-203ENST00000392901 TTC3P53804 2025 aa18.32■□□□□ 0.52
SHTN1-203ENST00000392901 GOLGA8MH3BSY2 632 aa18.31■□□□□ 0.52
SHTN1-203ENST00000392901 SYN3O14994 580 aa18.31■□□□□ 0.52
SHTN1-203ENST00000392901 KCNN4O15554 427 aa18.31■□□□□ 0.52
SHTN1-203ENST00000392901 TTC4O95801 387 aa18.31■□□□□ 0.52
SHTN1-203ENST00000392901 RBL1P28749 1068 aa18.31■□□□□ 0.52
SHTN1-203ENST00000392901 ARPP19P56211 112 aa18.31■□□□□ 0.52
SHTN1-203ENST00000392901 SLC10A2Q12908 348 aaPredicted RBP18.31■□□□□ 0.52
SHTN1-203ENST00000392901 MORF4L2Q15014 288 aa18.31■□□□□ 0.52
SHTN1-203ENST00000392901 EFHC2Q5JST6 749 aa18.31■□□□□ 0.52
SHTN1-203ENST00000392901 SDHAF4Q5VUM1 108 aa18.31■□□□□ 0.52
SHTN1-203ENST00000392901 FOXR1Q6PIV2 292 aa18.31■□□□□ 0.52
SHTN1-203ENST00000392901 CRIPAKQ8N1N5 446 aa18.31■□□□□ 0.52
SHTN1-203ENST00000392901 STKLD1Q8NE28 680 aa18.31■□□□□ 0.52
SHTN1-203ENST00000392901 IRGQQ8WZA9 623 aa18.31■□□□□ 0.52
SHTN1-203ENST00000392901 WDR6Q9NNW5 1121 aaKnown RBP18.31■□□□□ 0.52
SHTN1-203ENST00000392901 MARCH5Q9NX47 278 aa18.31■□□□□ 0.52
SHTN1-203ENST00000392901 MFHAS1Q9Y4C4 1052 aa18.31■□□□□ 0.52
SHTN1-203ENST00000392901 EIF3HO15372 352 aaKnown RBP eCLIP18.31■□□□□ 0.522e-7■■□□□ 13.2
SHTN1-203ENST00000392901 HOXA2O43364 376 aa18.31■□□□□ 0.52
SHTN1-203ENST00000392901 CXCL10P02778 98 aa18.31■□□□□ 0.52
SHTN1-203ENST00000392901 ZFXP17010 805 aaPredicted RBP18.31■□□□□ 0.52
SHTN1-203ENST00000392901 ADRA1BP35368 520 aa18.31■□□□□ 0.52
SHTN1-203ENST00000392901 IFI35P80217 286 aaPredicted RBP18.31■□□□□ 0.52
SHTN1-203ENST00000392901 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.31■□□□□ 0.52
SHTN1-203ENST00000392901 PSTKQ8IV42 348 aaKnown RBP18.31■□□□□ 0.52
SHTN1-203ENST00000392901 RNF139Q8WU17 664 aa18.31■□□□□ 0.52
SHTN1-203ENST00000392901 C9orf72Q96LT7 481 aa18.31■□□□□ 0.52
SHTN1-203ENST00000392901 TMEM109Q9BVC6 243 aa18.31■□□□□ 0.52
SHTN1-203ENST00000392901 USP29Q9HBJ7 922 aa18.31■□□□□ 0.52
SHTN1-203ENST00000392901 ANLNQ9NQW6 1124 aa18.31■□□□□ 0.52
SHTN1-203ENST00000392901 MDH1P40925 334 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms