RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 SYT17Q9BSW7 474 aa17.09■□□□□ 0.33
SCN3B-202ENST00000392770 APOA4P06727 396 aa17.09■□□□□ 0.33
SCN3B-202ENST00000392770 AGGF1Q8N302 714 aaeCLIP17.09■□□□□ 0.33
SCN3B-202ENST00000392770 SERPINB11Q96P15 392 aa17.09■□□□□ 0.33
SCN3B-202ENST00000392770 TBC1D13Q9NVG8 400 aa17.09■□□□□ 0.33
SCN3B-202ENST00000392770 NINJ2Q9NZG7 142 aa17.09■□□□□ 0.33
SCN3B-202ENST00000392770 C2CD2Q9Y426 696 aa17.09■□□□□ 0.33
SCN3B-202ENST00000392770 WDR27A2RRH5 827 aa17.08■□□□□ 0.33
SCN3B-202ENST00000392770 PDE2AO00408 941 aaPredicted RBP17.08■□□□□ 0.33
SCN3B-202ENST00000392770 TIMM44O43615 452 aa17.08■□□□□ 0.33
SCN3B-202ENST00000392770 SH3BGRP55822 239 aaPredicted RBP17.08■□□□□ 0.33
SCN3B-202ENST00000392770 PHF13Q86YI8 300 aaPredicted RBP17.08■□□□□ 0.33
SCN3B-202ENST00000392770 KIRREL3Q8IZU9 778 aa17.08■□□□□ 0.33
SCN3B-202ENST00000392770 FAM167BQ9BTA0 163 aa17.08■□□□□ 0.33
SCN3B-202ENST00000392770 PECAM1P16284 738 aaPredicted RBP17.08■□□□□ 0.33
SCN3B-202ENST00000392770 GRM5P41594 1212 aa17.08■□□□□ 0.33
SCN3B-202ENST00000392770 ARHGDIAP52565 204 aa17.08■□□□□ 0.33
SCN3B-202ENST00000392770 ESRRGP62508 458 aa17.08■□□□□ 0.33
SCN3B-202ENST00000392770 DNAL1Q4LDG9 190 aa17.08■□□□□ 0.33
SCN3B-202ENST00000392770 ITIH5Q86UX2 942 aa17.08■□□□□ 0.33
SCN3B-202ENST00000392770 SEMA4DQ92854 862 aa17.08■□□□□ 0.33
SCN3B-202ENST00000392770 USP13Q92995 863 aaPredicted RBP17.08■□□□□ 0.33
SCN3B-202ENST00000392770 CBX4O00257 560 aa17.08■□□□□ 0.32
SCN3B-202ENST00000392770 ELK3P41970 407 aa17.08■□□□□ 0.32
SCN3B-202ENST00000392770 HS6ST3Q8IZP7 471 aa17.08■□□□□ 0.32
SCN3B-202ENST00000392770 TKTL2Q9H0I9 626 aa17.08■□□□□ 0.32
SCN3B-202ENST00000392770 VPS9D1Q9Y2B5 631 aa17.08■□□□□ 0.32
SCN3B-202ENST00000392770 SP3Q02447 781 aa17.08■□□□□ 0.32
SCN3B-202ENST00000392770 AGAP9Q5VTM2 703 aa17.08■□□□□ 0.32
SCN3B-202ENST00000392770 N4BP2L2Q92802 583 aaPredicted RBP17.08■□□□□ 0.32
SCN3B-202ENST00000392770 TRMT6Q9UJA5 497 aaKnown RBP17.08■□□□□ 0.32
SCN3B-202ENST00000392770 NAALADL1Q9UQQ1 740 aa17.08■□□□□ 0.32
SCN3B-202ENST00000392770 DRG1Q9Y295 367 aaKnown RBP17.08■□□□□ 0.32
SCN3B-202ENST00000392770 MRPL42Q9Y6G3 142 aaKnown RBP17.08■□□□□ 0.32
SCN3B-202ENST00000392770 APOC4-APOC2K7ER74 178 aa17.08■□□□□ 0.32
SCN3B-202ENST00000392770 TOMM70O94826 608 aa17.08■□□□□ 0.32
SCN3B-202ENST00000392770 RTN3O95197 1032 aaPredicted RBP17.08■□□□□ 0.32
SCN3B-202ENST00000392770 APOC2P02655 101 aa17.08■□□□□ 0.32
SCN3B-202ENST00000392770 MRPL1Q9BYD6 325 aaKnown RBP17.08■□□□□ 0.32
SCN3B-202ENST00000392770 SHCBP1LQ9BZQ2 653 aa17.08■□□□□ 0.32
SCN3B-202ENST00000392770 RBM22Q9NW64 420 aaKnown RBP eCLIP17.08■□□□□ 0.32
SCN3B-202ENST00000392770 MAFBQ9Y5Q3 323 aaPredicted RBP17.08■□□□□ 0.32
SCN3B-202ENST00000392770 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.07■□□□□ 0.32
SCN3B-202ENST00000392770 LTFP02788 710 aa17.07■□□□□ 0.32
SCN3B-202ENST00000392770 AMHP03971 560 aa17.07■□□□□ 0.32
SCN3B-202ENST00000392770 CNTFP26441 200 aa17.07■□□□□ 0.32
SCN3B-202ENST00000392770 UGT3A1Q6NUS8 523 aa17.07■□□□□ 0.32
SCN3B-202ENST00000392770 ST13P4Q8IZP2 240 aaPredicted RBP17.07■□□□□ 0.32
SCN3B-202ENST00000392770 NAT9Q9BTE0 207 aa17.07■□□□□ 0.32
SCN3B-202ENST00000392770 TSPYL2Q9H2G4 693 aaPredicted RBP17.07■□□□□ 0.32
SCN3B-202ENST00000392770 TRUB2O95900 331 aaKnown RBP17.07■□□□□ 0.32
SCN3B-202ENST00000392770 ERFP50548 548 aa17.07■□□□□ 0.32
SCN3B-202ENST00000392770 NOMO3P69849 1222 aa17.07■□□□□ 0.32
SCN3B-202ENST00000392770 PHEXP78562 749 aa17.07■□□□□ 0.32
SCN3B-202ENST00000392770 BMPR2Q13873 1038 aa17.07■□□□□ 0.32
SCN3B-202ENST00000392770 DUSP28Q4G0W2 176 aa17.07■□□□□ 0.32
SCN3B-202ENST00000392770 C16orf89Q6UX73 402 aa17.07■□□□□ 0.32
SCN3B-202ENST00000392770 NPNTQ6UXI9 565 aa17.07■□□□□ 0.32
SCN3B-202ENST00000392770 PIH1D1Q9NWS0 290 aaKnown RBP17.07■□□□□ 0.32
SCN3B-202ENST00000392770 REXO2Q9Y3B8 237 aaKnown RBP17.07■□□□□ 0.32
SCN3B-202ENST00000392770 HACD1B0YJ81 288 aa17.07■□□□□ 0.32
SCN3B-202ENST00000392770 ENO3P13929 434 aaPredicted RBP17.07■□□□□ 0.32
SCN3B-202ENST00000392770 ZNF143P52747 638 aaPredicted RBP17.07■□□□□ 0.32
SCN3B-202ENST00000392770 CSE1LP55060 971 aaKnown RBP17.07■□□□□ 0.32
SCN3B-202ENST00000392770 RHOAP61586 193 aa17.07■□□□□ 0.32
SCN3B-202ENST00000392770 ARID3BQ8IVW6 561 aaPredicted RBP17.07■□□□□ 0.32
SCN3B-202ENST00000392770 KIF2BQ8N4N8 673 aa17.07■□□□□ 0.32
SCN3B-202ENST00000392770 TRIM4Q9C037 500 aa17.07■□□□□ 0.32
SCN3B-202ENST00000392770 ST3GAL5Q9UNP4 418 aa17.07■□□□□ 0.32
SCN3B-202ENST00000392770 A0A0G2JLL6 359 aaPredicted RBP17.07■□□□□ 0.32
SCN3B-202ENST00000392770 H2AFYO75367 372 aaKnown RBP17.07■□□□□ 0.32
SCN3B-202ENST00000392770 MYL4P12829 197 aa17.07■□□□□ 0.32
SCN3B-202ENST00000392770 ICAM3P32942 547 aa17.07■□□□□ 0.32
SCN3B-202ENST00000392770 RFC1P35251 1148 aaPredicted RBP17.07■□□□□ 0.32
SCN3B-202ENST00000392770 PRRT2Q7Z6L0 340 aaPredicted RBP17.07■□□□□ 0.32
SCN3B-202ENST00000392770 NIFKQ9BYG3 293 aaKnown RBP17.07■□□□□ 0.32
SCN3B-202ENST00000392770 STMN1P16949 149 aa17.07■□□□□ 0.32
SCN3B-202ENST00000392770 NPR3P17342 541 aa17.07■□□□□ 0.32
SCN3B-202ENST00000392770 ABCE1P61221 599 aaKnown RBP17.07■□□□□ 0.32
SCN3B-202ENST00000392770 FAM110CQ1W6H9 321 aa17.07■□□□□ 0.32
SCN3B-202ENST00000392770 RFWD2Q8NHY2 731 aa17.07■□□□□ 0.32
SCN3B-202ENST00000392770 UBXN6Q9BZV1 441 aa17.07■□□□□ 0.32
SCN3B-202ENST00000392770 CHST12Q9NRB3 414 aa17.07■□□□□ 0.32
SCN3B-202ENST00000392770 SAE1Q9UBE0 346 aaPredicted RBP17.07■□□□□ 0.32
SCN3B-202ENST00000392770 RNF103O00237 685 aa17.06■□□□□ 0.32
SCN3B-202ENST00000392770 TSPAN3O60637 253 aa17.06■□□□□ 0.32
SCN3B-202ENST00000392770 YBX3P16989 372 aaKnown RBP eCLIP17.06■□□□□ 0.32
SCN3B-202ENST00000392770 MYCBPAPQ8TBZ2 947 aa17.06■□□□□ 0.32
SCN3B-202ENST00000392770 MAF1Q9H063 256 aa17.06■□□□□ 0.32
SCN3B-202ENST00000392770 CFAP99D6REC4 459 aa17.06■□□□□ 0.32
SCN3B-202ENST00000392770 TPH1P17752 444 aa17.06■□□□□ 0.32
SCN3B-202ENST00000392770 ARF4P18085 180 aaPredicted RBP17.06■□□□□ 0.32
SCN3B-202ENST00000392770 SERPINB4P48594 390 aa17.06■□□□□ 0.32
SCN3B-202ENST00000392770 ZNF844Q08AG5 666 aa17.06■□□□□ 0.32
SCN3B-202ENST00000392770 BTG3Q14201 252 aaPredicted RBP17.06■□□□□ 0.32
SCN3B-202ENST00000392770 B3GALNT2Q8NCR0 500 aa17.06■□□□□ 0.32
SCN3B-202ENST00000392770 MRPL46Q9H2W6 279 aaKnown RBP17.06■□□□□ 0.32
SCN3B-202ENST00000392770 ALS2Q96Q42 1657 aa17.06■□□□□ 0.32
SCN3B-202ENST00000392770 NFKBIEO00221 500 aa17.06■□□□□ 0.32
SCN3B-202ENST00000392770 ETS1P14921 441 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms