RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 PITX1P78337 314 aaPredicted RBP26.49■■□□□ 1.83
HOMER3-202ENST00000392351 COG7P83436 770 aa26.49■■□□□ 1.83
HOMER3-202ENST00000392351 MAMLD1Q13495 774 aa26.49■■□□□ 1.83
HOMER3-202ENST00000392351 TRNP1Q6NT89 227 aa26.49■■□□□ 1.83
HOMER3-202ENST00000392351 BPIFB1Q8TDL5 484 aa26.49■■□□□ 1.83
HOMER3-202ENST00000392351 SERPINB11Q96P15 392 aa26.49■■□□□ 1.83
HOMER3-202ENST00000392351 MCEEQ96PE7 176 aa26.49■■□□□ 1.83
HOMER3-202ENST00000392351 STAP1Q9ULZ2 295 aa26.49■■□□□ 1.83
HOMER3-202ENST00000392351 TRUB2O95900 331 aaKnown RBP26.48■■□□□ 1.83
HOMER3-202ENST00000392351 HMBSP08397 361 aa26.48■■□□□ 1.83
HOMER3-202ENST00000392351 TCF3P15923 654 aa26.48■■□□□ 1.83
HOMER3-202ENST00000392351 RFC1P35251 1148 aaPredicted RBP26.48■■□□□ 1.83
HOMER3-202ENST00000392351 GRM2Q14416 872 aa26.48■■□□□ 1.83
HOMER3-202ENST00000392351 PPP1R15BQ5SWA1 713 aa26.48■■□□□ 1.83
HOMER3-202ENST00000392351 DCUN1D2Q6PH85 259 aa26.48■■□□□ 1.83
HOMER3-202ENST00000392351 RAD9BQ6WBX8 426 aa26.48■■□□□ 1.83
HOMER3-202ENST00000392351 MFSD6LQ8IWD5 586 aa26.48■■□□□ 1.83
HOMER3-202ENST00000392351 GJD3Q8N144 294 aa26.48■■□□□ 1.83
HOMER3-202ENST00000392351 DDX23Q9BUQ8 820 aaKnown RBP26.48■■□□□ 1.83
HOMER3-202ENST00000392351 FAM204AQ9H8W3 233 aa26.48■■□□□ 1.83
HOMER3-202ENST00000392351 SCINQ9Y6U3 715 aa26.48■■□□□ 1.83
HOMER3-202ENST00000392351 NDUFA10O95299 355 aa26.47■■□□□ 1.83
HOMER3-202ENST00000392351 H2AFZP0C0S5 128 aa26.47■■□□□ 1.83
HOMER3-202ENST00000392351 PSMC3P17980 439 aa26.47■■□□□ 1.83
HOMER3-202ENST00000392351 RPL7AP62424 266 aaKnown RBP26.47■■□□□ 1.83
HOMER3-202ENST00000392351 GPC5P78333 572 aa26.47■■□□□ 1.83
HOMER3-202ENST00000392351 H2AFVQ71UI9 128 aa26.47■■□□□ 1.83
HOMER3-202ENST00000392351 DEPDC1BQ8WUY9 529 aa26.47■■□□□ 1.83
HOMER3-202ENST00000392351 CTNNBL1Q8WYA6 563 aaPredicted RBP26.47■■□□□ 1.83
HOMER3-202ENST00000392351 PDLIM2Q96JY6 352 aa26.47■■□□□ 1.83
HOMER3-202ENST00000392351 CFAP57Q96MR6 1250 aa26.47■■□□□ 1.83
HOMER3-202ENST00000392351 RRN3Q9NYV6 651 aa26.47■■□□□ 1.83
HOMER3-202ENST00000392351 SH3BP1Q9Y3L3 701 aa26.47■■□□□ 1.83
HOMER3-202ENST00000392351 HBS1LQ9Y450 684 aaKnown RBP26.47■■□□□ 1.83
HOMER3-202ENST00000392351 EPN1Q9Y6I3 576 aaPredicted RBP26.47■■□□□ 1.83
HOMER3-202ENST00000392351 SYNJ2BP-COX16A0A087WUM0 186 aa26.46■■□□□ 1.83
HOMER3-202ENST00000392351 C2CD4BA6NLJ0 364 aa26.46■■□□□ 1.83
HOMER3-202ENST00000392351 SCAMP3O14828 347 aaKnown RBP26.46■■□□□ 1.83
HOMER3-202ENST00000392351 LCA5LO95447 670 aa26.46■■□□□ 1.83
HOMER3-202ENST00000392351 PDGFRAP16234 1089 aa26.46■■□□□ 1.83
HOMER3-202ENST00000392351 SULT1E1P49888 294 aa26.46■■□□□ 1.83
HOMER3-202ENST00000392351 SPA17Q15506 151 aa26.46■■□□□ 1.83
HOMER3-202ENST00000392351 LRRC8AQ8IWT6 810 aa26.46■■□□□ 1.83
HOMER3-202ENST00000392351 RXFP2Q8WXD0 754 aa26.46■■□□□ 1.83
HOMER3-202ENST00000392351 WBP2Q969T9 261 aa26.46■■□□□ 1.83
HOMER3-202ENST00000392351 NPY6RQ99463 290 aa26.46■■□□□ 1.83
HOMER3-202ENST00000392351 MRPL47Q9HD33 250 aaKnown RBP26.46■■□□□ 1.83
HOMER3-202ENST00000392351 CD320Q9NPF0 282 aa26.46■■□□□ 1.83
HOMER3-202ENST00000392351 DDIT4Q9NX09 232 aa26.46■■□□□ 1.83
HOMER3-202ENST00000392351 COX16Q9P0S2 106 aa26.46■■□□□ 1.83
HOMER3-202ENST00000392351 EIF3CLB5ME19 914 aaKnown RBP26.46■■□□□ 1.83
HOMER3-202ENST00000392351 IRAK2O43187 625 aa26.46■■□□□ 1.83
HOMER3-202ENST00000392351 STC2O76061 302 aa26.46■■□□□ 1.83
HOMER3-202ENST00000392351 IGLV3-25P01717 112 aa26.46■■□□□ 1.83
HOMER3-202ENST00000392351 TFE3P19532 575 aaPredicted RBP26.46■■□□□ 1.83
HOMER3-202ENST00000392351 SDC4P31431 198 aa26.46■■□□□ 1.83
HOMER3-202ENST00000392351 KPNA1P52294 538 aaPredicted RBP26.46■■□□□ 1.83
HOMER3-202ENST00000392351 FCHO2Q0JRZ9 810 aa26.46■■□□□ 1.83
HOMER3-202ENST00000392351 TRIP4Q15650 581 aaPredicted RBP26.46■■□□□ 1.83
HOMER3-202ENST00000392351 SLC25A52Q3SY17 297 aa26.46■■□□□ 1.83
HOMER3-202ENST00000392351 RNF135Q8IUD6 432 aa26.46■■□□□ 1.83
HOMER3-202ENST00000392351 YAF2Q8IY57 180 aa26.46■■□□□ 1.83
HOMER3-202ENST00000392351 SLC44A3Q8N4M1 653 aa26.46■■□□□ 1.83
HOMER3-202ENST00000392351 NT5C3BQ969T7 300 aa26.46■■□□□ 1.83
HOMER3-202ENST00000392351 ARHGEF26Q96DR7 871 aa26.46■■□□□ 1.83
HOMER3-202ENST00000392351 EIF3CQ99613 913 aaKnown RBP26.46■■□□□ 1.83
HOMER3-202ENST00000392351 M0QYT0 321 aa26.45■■□□□ 1.82
HOMER3-202ENST00000392351 IPO7O95373 1038 aaKnown RBP26.45■■□□□ 1.82
HOMER3-202ENST00000392351 CYP1A2P05177 515 aa26.45■■□□□ 1.82
HOMER3-202ENST00000392351 TBX4P57082 545 aa26.45■■□□□ 1.82
HOMER3-202ENST00000392351 NNTQ13423 1086 aa26.45■■□□□ 1.82
HOMER3-202ENST00000392351 C10orf76Q5T2E6 689 aa26.45■■□□□ 1.82
HOMER3-202ENST00000392351 OTUD1Q5VV17 481 aaPredicted RBP26.45■■□□□ 1.82
HOMER3-202ENST00000392351 CC2D1AQ6P1N0 951 aaPredicted RBP26.45■■□□□ 1.82
HOMER3-202ENST00000392351 CCDC112Q8NEF3 446 aa26.45■■□□□ 1.82
HOMER3-202ENST00000392351 PLD4Q96BZ4 506 aa26.45■■□□□ 1.82
HOMER3-202ENST00000392351 UHRF1Q96T88 793 aaPredicted RBP26.45■■□□□ 1.82
HOMER3-202ENST00000392351 TBCBQ99426 244 aa26.45■■□□□ 1.82
HOMER3-202ENST00000392351 TRMT61BQ9BVS5 477 aaKnown RBP26.45■■□□□ 1.82
HOMER3-202ENST00000392351 ADAM33Q9BZ11 813 aa26.45■■□□□ 1.82
HOMER3-202ENST00000392351 THG1LQ9NWX6 298 aaKnown RBP26.45■■□□□ 1.82
HOMER3-202ENST00000392351 LSM7Q9UK45 103 aaKnown RBP26.45■■□□□ 1.82
HOMER3-202ENST00000392351 TLR6Q9Y2C9 796 aa26.45■■□□□ 1.82
HOMER3-202ENST00000392351 BDP1A6H8Y1 2624 aa26.45■■□□□ 1.82
HOMER3-202ENST00000392351 TRIOO75962 3097 aa26.44■■□□□ 1.82
HOMER3-202ENST00000392351 TMEM253P0C7T8 217 aa26.44■■□□□ 1.82
HOMER3-202ENST00000392351 GPD1P21695 349 aa26.44■■□□□ 1.82
HOMER3-202ENST00000392351 GBP1P32455 592 aa26.44■■□□□ 1.82
HOMER3-202ENST00000392351 ATP11AP98196 1134 aa26.44■■□□□ 1.82
HOMER3-202ENST00000392351 NME3Q13232 169 aa26.44■■□□□ 1.82
HOMER3-202ENST00000392351 NUP85Q9BW27 656 aa26.44■■□□□ 1.82
HOMER3-202ENST00000392351 CALCOCO1Q9P1Z2 691 aa26.44■■□□□ 1.82
HOMER3-202ENST00000392351 E2F8A0AVK6 867 aa26.43■■□□□ 1.82
HOMER3-202ENST00000392351 PTMAP06454 111 aaKnown RBP26.43■■□□□ 1.82
HOMER3-202ENST00000392351 CORO1AP31146 461 aaKnown RBP26.43■■□□□ 1.82
HOMER3-202ENST00000392351 MAGEA1P43355 309 aa26.43■■□□□ 1.82
HOMER3-202ENST00000392351 TDGQ13569 410 aa26.43■■□□□ 1.82
HOMER3-202ENST00000392351 CDO1Q16878 200 aa26.43■■□□□ 1.82
HOMER3-202ENST00000392351 C15orf59Q2T9L4 293 aaPredicted RBP26.43■■□□□ 1.82
HOMER3-202ENST00000392351 CCDC14Q49A88 953 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms